RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 TMCO2Q7Z6W1 182 aaPredicted RBP4.78□□□□□ -1.64
VPS13B-208ENST00000521037 ADSSL1Q8N142 457 aa4.78□□□□□ -1.64
VPS13B-208ENST00000521037 TMEM199Q8N511 208 aa4.78□□□□□ -1.64
VPS13B-208ENST00000521037 CFAP53Q96M91 514 aa4.78□□□□□ -1.64
VPS13B-208ENST00000521037 FGD4Q96M96 766 aa4.78□□□□□ -1.64
VPS13B-208ENST00000521037 PAGR1Q9BTK6 254 aa4.78□□□□□ -1.64
VPS13B-208ENST00000521037 MOV10L1Q9BXT6 1211 aaKnown RBP4.78□□□□□ -1.64
VPS13B-208ENST00000521037 RNF19AQ9NV58 838 aa4.78□□□□□ -1.64
VPS13B-208ENST00000521037 PRKAG3Q9UGI9 489 aa4.78□□□□□ -1.64
VPS13B-208ENST00000521037 KCNH3Q9ULD8 1083 aa4.78□□□□□ -1.64
VPS13B-208ENST00000521037 CORINQ9Y5Q5 1042 aa4.78□□□□□ -1.64
VPS13B-208ENST00000521037 LRRFIP2Q9Y608 721 aaKnown RBP4.78□□□□□ -1.64
VPS13B-208ENST00000521037 SLC4A7Q9Y6M7 1214 aa4.78□□□□□ -1.64
VPS13B-208ENST00000521037 FREM2Q5SZK8 3169 aa4.78□□□□□ -1.64
VPS13B-208ENST00000521037 ELP1O95163 1332 aa4.77□□□□□ -1.65
VPS13B-208ENST00000521037 KIF16BQ96L93 1317 aa4.77□□□□□ -1.65
VPS13B-208ENST00000521037 SALL1Q9NSC2 1324 aa4.77□□□□□ -1.65
VPS13B-208ENST00000521037 TLDC2A0PJX2 215 aa4.77□□□□□ -1.65
VPS13B-208ENST00000521037 LOC730098B7Z3J9 87 aa4.77□□□□□ -1.65
VPS13B-208ENST00000521037 SNAI1O95863 264 aaPredicted RBP4.77□□□□□ -1.65
VPS13B-208ENST00000521037 ADRB1P08588 477 aa4.77□□□□□ -1.65
VPS13B-208ENST00000521037 LINC00271P0C7V0 271 aa4.77□□□□□ -1.65
VPS13B-208ENST00000521037 TFE3P19532 575 aaPredicted RBP4.77□□□□□ -1.65
VPS13B-208ENST00000521037 VIPR1P32241 457 aa4.77□□□□□ -1.65
VPS13B-208ENST00000521037 GTF2F1P35269 517 aaKnown RBP eCLIP4.77□□□□□ -1.65
VPS13B-208ENST00000521037 AFF3P51826 1226 aaKnown RBP4.77□□□□□ -1.65
VPS13B-208ENST00000521037 CCL23P55773 120 aa4.77□□□□□ -1.65
VPS13B-208ENST00000521037 ERVK-21P61565 698 aa4.77□□□□□ -1.65
VPS13B-208ENST00000521037 IRX3P78415 501 aaPredicted RBP4.77□□□□□ -1.65
VPS13B-208ENST00000521037 SRSF3P84103 164 aaKnown RBP4.77□□□□□ -1.65
VPS13B-208ENST00000521037 ZXDAP98168 799 aa4.77□□□□□ -1.65
VPS13B-208ENST00000521037 ARID5AQ03989 594 aa4.77□□□□□ -1.65
VPS13B-208ENST00000521037 PABPC4Q13310 644 aaKnown RBP eCLIP4.77□□□□□ -1.65
VPS13B-208ENST00000521037 CCDC144BQ3MJ40 725 aa4.77□□□□□ -1.65
VPS13B-208ENST00000521037 KIAA1755Q5JYT7 1200 aa4.77□□□□□ -1.65
VPS13B-208ENST00000521037 FRMD5Q7Z6J6 570 aa4.77□□□□□ -1.65
VPS13B-208ENST00000521037 HERC6Q8IVU3 1022 aa4.77□□□□□ -1.65
VPS13B-208ENST00000521037 ZNF654Q8IZM8 581 aa4.77□□□□□ -1.65
VPS13B-208ENST00000521037 TMEM105Q8N8V8 129 aa4.77□□□□□ -1.65
VPS13B-208ENST00000521037 TP53I13Q8NBR0 393 aaPredicted RBP4.77□□□□□ -1.65
VPS13B-208ENST00000521037 ATOH1Q92858 354 aaPredicted RBP4.77□□□□□ -1.65
VPS13B-208ENST00000521037 SCLYQ96I15 445 aa4.77□□□□□ -1.65
VPS13B-208ENST00000521037 PRRX2Q99811 253 aa4.77□□□□□ -1.65
VPS13B-208ENST00000521037 KATNBL1Q9H079 304 aa4.77□□□□□ -1.65
VPS13B-208ENST00000521037 TRPV6Q9H1D0 765 aa4.77□□□□□ -1.65
VPS13B-208ENST00000521037 UPF3AQ9H1J1 476 aaKnown RBP4.77□□□□□ -1.65
VPS13B-208ENST00000521037 CRTAC1Q9NQ79 661 aa4.77□□□□□ -1.65
VPS13B-208ENST00000521037 STARD7Q9NQZ5 370 aa4.77□□□□□ -1.65
VPS13B-208ENST00000521037 NRBP1Q9UHY1 535 aa4.77□□□□□ -1.65
VPS13B-208ENST00000521037 DDX41Q9UJV9 622 aaKnown RBP4.77□□□□□ -1.65
VPS13B-208ENST00000521037 IRAK3Q9Y616 596 aa4.77□□□□□ -1.65
VPS13B-208ENST00000521037 AK5Q9Y6K8 562 aa4.77□□□□□ -1.65
VPS13B-208ENST00000521037 EP300Q09472 2414 aaPredicted RBP4.76□□□□□ -1.65
VPS13B-208ENST00000521037 MAST3O60307 1309 aa4.76□□□□□ -1.65
VPS13B-208ENST00000521037 GPR75-ASB3A0A0A6YYF3 556 aa4.76□□□□□ -1.65
VPS13B-208ENST00000521037 ELL2O00472 640 aaPredicted RBP4.76□□□□□ -1.65
VPS13B-208ENST00000521037 MBTPS2O43462 519 aa4.76□□□□□ -1.65
VPS13B-208ENST00000521037 NRDCO43847 1150 aa4.76□□□□□ -1.65
VPS13B-208ENST00000521037 B4GALT4O60513 344 aa4.76□□□□□ -1.65
VPS13B-208ENST00000521037 PDE8BO95263 885 aa4.76□□□□□ -1.65
VPS13B-208ENST00000521037 ASGR1P07306 291 aa4.76□□□□□ -1.65
VPS13B-208ENST00000521037 DNAJA1P31689 397 aaKnown RBP4.76□□□□□ -1.65
VPS13B-208ENST00000521037 GUCY1A2P33402 732 aa4.76□□□□□ -1.65
VPS13B-208ENST00000521037 PDE4BQ07343 736 aa4.76□□□□□ -1.65
VPS13B-208ENST00000521037 DUSP4Q13115 394 aa4.76□□□□□ -1.65
VPS13B-208ENST00000521037 IFIT5Q13325 482 aaKnown RBP4.76□□□□□ -1.65
VPS13B-208ENST00000521037 SCN5AQ14524 2016 aa4.76□□□□□ -1.65
VPS13B-208ENST00000521037 ST3GAL2Q16842 350 aa4.76□□□□□ -1.65
VPS13B-208ENST00000521037 VMACQ2NL98 169 aa4.76□□□□□ -1.65
VPS13B-208ENST00000521037 BEND3Q5T5X7 828 aa4.76□□□□□ -1.65
VPS13B-208ENST00000521037 DGLUCYQ7Z3D6 616 aa4.76□□□□□ -1.65
VPS13B-208ENST00000521037 FAM129CQ86XR2 697 aa4.76□□□□□ -1.65
VPS13B-208ENST00000521037 SIRT2Q8IXJ6 389 aa4.76□□□□□ -1.65
VPS13B-208ENST00000521037 SLFN12Q8IYM2 578 aa4.76□□□□□ -1.65
VPS13B-208ENST00000521037 SYT8Q8NBV8 401 aa4.76□□□□□ -1.65
VPS13B-208ENST00000521037 CTAGE1Q96RT6 745 aa4.76□□□□□ -1.65
VPS13B-208ENST00000521037 CHMP4AQ9BY43 222 aa4.76□□□□□ -1.65
VPS13B-208ENST00000521037 INPP5FQ9Y2H2 1132 aa4.76□□□□□ -1.65
VPS13B-208ENST00000521037 OTOGLQ3ZCN5 2332 aa4.75□□□□□ -1.65
VPS13B-208ENST00000521037 FAM208BQ5VWN6 2430 aa4.75□□□□□ -1.65
VPS13B-208ENST00000521037 LINC01553A4QN01 128 aa4.75□□□□□ -1.65
VPS13B-208ENST00000521037 C19orf81C9J6K1 198 aa4.75□□□□□ -1.65
VPS13B-208ENST00000521037 TBX10O75333 385 aa4.75□□□□□ -1.65
VPS13B-208ENST00000521037 CTSHP09668 335 aa4.75□□□□□ -1.65
VPS13B-208ENST00000521037 FGRP09769 529 aa4.75□□□□□ -1.65
VPS13B-208ENST00000521037 RARBP10826 455 aa4.75□□□□□ -1.65
VPS13B-208ENST00000521037 VCAM1P19320 739 aa4.75□□□□□ -1.65
VPS13B-208ENST00000521037 LIG3P49916 1009 aa4.75□□□□□ -1.65
VPS13B-208ENST00000521037 CDR1P51861 262 aa4.75□□□□□ -1.65
VPS13B-208ENST00000521037 RABL6Q3YEC7 729 aaPredicted RBP4.75□□□□□ -1.65
VPS13B-208ENST00000521037 TMEM63BQ5T3F8 832 aa4.75□□□□□ -1.65
VPS13B-208ENST00000521037 ADGRF1Q5T601 910 aa4.75□□□□□ -1.65
VPS13B-208ENST00000521037 SDE2Q6IQ49 451 aa4.75□□□□□ -1.65
VPS13B-208ENST00000521037 HS2ST1Q7LGA3 356 aa4.75□□□□□ -1.65
VPS13B-208ENST00000521037 RNF180Q86T96 592 aa4.75□□□□□ -1.65
VPS13B-208ENST00000521037 IGDCC3Q8IVU1 814 aa4.75□□□□□ -1.65
VPS13B-208ENST00000521037 ZDHHC14Q8IZN3 488 aa4.75□□□□□ -1.65
VPS13B-208ENST00000521037 ABRAQ8N0Z2 381 aa4.75□□□□□ -1.65
VPS13B-208ENST00000521037 ANKRD44Q8N8A2 993 aa4.75□□□□□ -1.65
VPS13B-208ENST00000521037 SHCBP1Q8NEM2 672 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms