RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 SLC12A3P55017 1021 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 STRN3Q13033 797 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 ZNF268Q14587 947 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 CBWD6Q4V339 395 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 CBWD3Q5JTY5 395 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 CBWD5Q5RIA9 395 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 TTC27Q6P3X3 843 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 ADAM7Q9H2U9 754 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 PARVGQ9HBI0 331 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 COG5Q9UP83 839 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 USTQ9Y2C2 406 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 RWDD2BP57060 319 aa13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 GPATCH4Q5T3I0 446 aaKnown RBP13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 HHATQ5VTY9 493 aa13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 NAF1Q96HR8 494 aaKnown RBP13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 RMDN2Q96LZ7 410 aa13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 LRRC37BQ96QE4 947 aa13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 TSC22D3Q99576 134 aa13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 NUP85Q9BW27 656 aa13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 EBF2Q9HAK2 575 aa13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 ACP6Q9NPH0 428 aa13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 GRHL1Q9NZI5 618 aa13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 SERPINB13Q9UIV8 391 aa13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 PCDHA2Q9Y5H9 948 aa13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 CCDC189A1A4V9 331 aa13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 RIPK1Q13546 671 aa13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 RBBP5Q15291 538 aaKnown RBP13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 EPM2AIP1Q7L775 607 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 LONP2Q86WA8 852 aa13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 SLC13A5Q86YT5 568 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 ZNF564Q8TBZ8 553 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 VPS37BQ9H9H4 285 aa13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 CNOT7Q9UIV1 285 aaKnown RBP13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 PPP1R11O60927 126 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 CFBP00751 764 aa13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 ERFP50548 548 aa13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 THEMIS2Q5TEJ8 643 aa13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 BTNL9Q6UXG8 535 aa13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 SYT2Q8N9I0 419 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 SLC30A5Q8TAD4 765 aa13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 TBC1D22AQ8WUA7 517 aa13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 RTFDC1Q9BY42 306 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 SIX2Q9NPC8 291 aa13.74□□□□□ -0.21
TRAPPC9-208ENST00000520857 ASTN1O14525 1302 aa13.73□□□□□ -0.21
TRAPPC9-208ENST00000520857 CTCFP49711 727 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC9-208ENST00000520857 PPP4CP60510 307 aa13.73□□□□□ -0.21
TRAPPC9-208ENST00000520857 RBM26Q5T8P6 1007 aaKnown RBP13.73□□□□□ -0.21
TRAPPC9-208ENST00000520857 CPNE8Q86YQ8 564 aa13.73□□□□□ -0.21
TRAPPC9-208ENST00000520857 LRRC8CQ8TDW0 803 aa13.73□□□□□ -0.21
TRAPPC9-208ENST00000520857 RXFP1Q9HBX9 757 aa13.73□□□□□ -0.21
TRAPPC9-208ENST00000520857 ZBTB39O15060 712 aa13.73□□□□□ -0.21
TRAPPC9-208ENST00000520857 SLC16A3O15427 465 aaKnown RBP13.73□□□□□ -0.21
TRAPPC9-208ENST00000520857 SMARCA1P28370 1054 aa13.73□□□□□ -0.21
TRAPPC9-208ENST00000520857 NT5C2P49902 561 aa13.73□□□□□ -0.21
TRAPPC9-208ENST00000520857 POU5F1Q01860 360 aaKnown RBP13.73□□□□□ -0.21
TRAPPC9-208ENST00000520857 PLCB3Q01970 1234 aa13.73□□□□□ -0.21
TRAPPC9-208ENST00000520857 PARD3BQ8TEW8 1205 aa13.73□□□□□ -0.21
TRAPPC9-208ENST00000520857 EPB41L4BQ9H329 900 aa13.73□□□□□ -0.21
TRAPPC9-208ENST00000520857 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.73□□□□□ -0.21
TRAPPC9-208ENST00000520857 EMSYQ7Z589 1322 aa13.73□□□□□ -0.21
TRAPPC9-208ENST00000520857 ARHGEF35A5YM69 484 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 K7ENM7 598 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 VCAM1P19320 739 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 RPA1P27694 616 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 SLFN13Q68D06 897 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 TRMT10CQ7L0Y3 403 aaKnown RBP13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 ANKRD35Q8N283 1001 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 TAB3Q8N5C8 712 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 CYP2W1Q8TAV3 490 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 EIF2AK1Q9BQI3 630 aaKnown RBP13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 ARHGEF10LQ9HCE6 1279 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 CD209Q9NNX6 404 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 ADAM22Q9P0K1 906 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 TCEAL9Q9UHQ7 104 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 PARP4Q9UKK3 1724 aaKnown RBP13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 EXOC1LA0A1B0GW35 172 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 GOLGA8IPA6NC78 632 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 GOLGA8JA6NMD2 632 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 CA4P22748 312 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 ITGA8P53708 1063 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 POLE2P56282 527 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 PPP1R21Q6ZMI0 780 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 ELMO3Q96BJ8 720 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 ROPN1BQ9BZX4 212 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 ROPN1Q9HAT0 212 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 DCTN4Q9UJW0 460 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 CYP26A1O43174 497 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 CHKAP35790 457 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 FOXR2Q6PJQ5 311 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 C4orf33Q8N1A6 199 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 SH3GL3Q99963 347 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 GLT8D2Q9H1C3 349 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 ZFATQ9P243 1243 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 GGA1Q9UJY5 639 aa13.72□□□□□ -0.21
TRAPPC9-208ENST00000520857 MAPK13O15264 365 aa13.71□□□□□ -0.21
TRAPPC9-208ENST00000520857 GAP43P17677 238 aa13.71□□□□□ -0.21
TRAPPC9-208ENST00000520857 PPATQ06203 517 aa13.71□□□□□ -0.21
TRAPPC9-208ENST00000520857 BNIP1Q12981 228 aa13.71□□□□□ -0.21
TRAPPC9-208ENST00000520857 SPDYCQ5MJ68 293 aa13.71□□□□□ -0.21
TRAPPC9-208ENST00000520857 MIGA2Q7L4E1 593 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms