RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 TMEM87AQ8NBN3 555 aa9.02□□□□□ -0.97
CSMD1-209ENST00000520630 SNX21Q969T3 373 aa9.02□□□□□ -0.97
CSMD1-209ENST00000520630 B3GALT6Q96L58 329 aa9.02□□□□□ -0.97
CSMD1-209ENST00000520630 MAP3K14Q99558 947 aa9.02□□□□□ -0.97
CSMD1-209ENST00000520630 HERC2P3Q9BVR0 1158 aa9.02□□□□□ -0.97
CSMD1-209ENST00000520630 PRKD2Q9BZL6 878 aa9.02□□□□□ -0.97
CSMD1-209ENST00000520630 PLA2G2FQ9BZM2 168 aa9.02□□□□□ -0.97
CSMD1-209ENST00000520630 TM6SF1Q9BZW5 370 aa9.02□□□□□ -0.97
CSMD1-209ENST00000520630 LY9Q9HBG7 655 aa9.02□□□□□ -0.97
CSMD1-209ENST00000520630 MRPL17Q9NRX2 175 aaKnown RBP9.02□□□□□ -0.97
CSMD1-209ENST00000520630 RXFP3Q9NSD7 469 aa9.02□□□□□ -0.97
CSMD1-209ENST00000520630 SEMA4GQ9NTN9 838 aa9.02□□□□□ -0.97
CSMD1-209ENST00000520630 MIOSQ9NXC5 875 aa9.02□□□□□ -0.97
CSMD1-209ENST00000520630 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.02□□□□□ -0.97
CSMD1-209ENST00000520630 ZMIZ1Q9ULJ6 1067 aa9.02□□□□□ -0.97
CSMD1-209ENST00000520630 WASF3Q9UPY6 502 aa9.02□□□□□ -0.97
CSMD1-209ENST00000520630 AKT3Q9Y243 479 aa9.02□□□□□ -0.97
CSMD1-209ENST00000520630 INPP5FQ9Y2H2 1132 aa9.02□□□□□ -0.97
CSMD1-209ENST00000520630 HELZ2Q9BYK8 2649 aaKnown RBP9.01□□□□□ -0.97
CSMD1-209ENST00000520630 SPDYE3A6NKU9 549 aa9.01□□□□□ -0.97
CSMD1-209ENST00000520630 SPDYE4A6NLX3 237 aa9.01□□□□□ -0.97
CSMD1-209ENST00000520630 TGM5O43548 720 aa9.01□□□□□ -0.97
CSMD1-209ENST00000520630 HRO43593 1189 aa9.01□□□□□ -0.97
CSMD1-209ENST00000520630 STBD1O95210 358 aa9.01□□□□□ -0.97
CSMD1-209ENST00000520630 CD2BP2O95400 341 aaKnown RBP9.01□□□□□ -0.97
CSMD1-209ENST00000520630 NCLP19338 710 aaKnown RBP9.01□□□□□ -0.97
CSMD1-209ENST00000520630 RXRAP19793 462 aa9.01□□□□□ -0.97
CSMD1-209ENST00000520630 RPS9P46781 194 aaKnown RBP9.01□□□□□ -0.97
CSMD1-209ENST00000520630 CLK2P49760 499 aaKnown RBP9.01□□□□□ -0.97
CSMD1-209ENST00000520630 AK2P54819 239 aa9.01□□□□□ -0.97
CSMD1-209ENST00000520630 PRKCQQ04759 706 aa9.01□□□□□ -0.97
CSMD1-209ENST00000520630 SRSF5Q13243 272 aaKnown RBP9.01□□□□□ -0.97
CSMD1-209ENST00000520630 GAS6Q14393 721 aa9.01□□□□□ -0.97
CSMD1-209ENST00000520630 TARBP2Q15633 366 aaKnown RBP9.01□□□□□ -0.97
CSMD1-209ENST00000520630 UGCGQ16739 394 aa9.01□□□□□ -0.97
CSMD1-209ENST00000520630 RNF20Q5VTR2 975 aa9.01□□□□□ -0.97
CSMD1-209ENST00000520630 FAM160B1Q5W0V3 765 aa9.01□□□□□ -0.97
CSMD1-209ENST00000520630 PALB2Q86YC2 1186 aa9.01□□□□□ -0.97
CSMD1-209ENST00000520630 STAMQ92783 540 aa9.01□□□□□ -0.97
CSMD1-209ENST00000520630 ZSWIM6Q9HCJ5 1215 aa9.01□□□□□ -0.97
CSMD1-209ENST00000520630 CHST7Q9NS84 486 aa9.01□□□□□ -0.97
CSMD1-209ENST00000520630 FAM105AQ9NUU6 356 aa9.01□□□□□ -0.97
CSMD1-209ENST00000520630 DACT1Q9NYF0 836 aa9.01□□□□□ -0.97
CSMD1-209ENST00000520630 A0A087WZ62 844 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 E7EWF7 191 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 MAGEB2O15479 319 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 LRP3O75074 770 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 GLUD1P00367 558 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 CPA1P15085 419 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 RPL17P18621 184 aaKnown RBP9□□□□□ -0.97
CSMD1-209ENST00000520630 SREBF1P36956 1147 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 DSG1Q02413 1049 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 CSRP2Q16527 193 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 WDR44Q5JSH3 913 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 ZBTB41Q5SVQ8 909 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 UBXN11Q5T124 520 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 WWC2Q6AWC2 1192 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 LAIR1Q6GTX8 287 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 RSPO2Q6UXX9 243 aaPredicted RBP9□□□□□ -0.97
CSMD1-209ENST00000520630 GRASPQ7Z6J2 395 aaPredicted RBP9□□□□□ -0.97
CSMD1-209ENST00000520630 MRPL10Q7Z7H8 261 aaKnown RBP9□□□□□ -0.97
CSMD1-209ENST00000520630 RAB11FIP4Q86YS3 637 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 COLGALT2Q8IYK4 626 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 ITFG1Q8TB96 612 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 HDAC7Q8WUI4 952 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 FGF13Q92913 245 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 SECISBP2LQ93073 1101 aaKnown RBP9□□□□□ -0.97
CSMD1-209ENST00000520630 SHDQ96IW2 340 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 JAKMIP1Q96N16 626 aaKnown RBP9□□□□□ -0.97
CSMD1-209ENST00000520630 MBOAT7Q96N66 472 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 IPO9Q96P70 1041 aaKnown RBP9□□□□□ -0.97
CSMD1-209ENST00000520630 KXD1Q9BQD3 176 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 FDXACB1Q9BRP7 624 aaPredicted RBP9□□□□□ -0.97
CSMD1-209ENST00000520630 ANO3Q9BYT9 981 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 GPR62Q9BZJ7 368 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 CHST12Q9NRB3 414 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 FAM217BQ9NTX9 383 aaPredicted RBP9□□□□□ -0.97
CSMD1-209ENST00000520630 GABBR1Q9UBS5 961 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 FAN1Q9Y2M0 1017 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 GON4LQ3T8J9 2241 aa9□□□□□ -0.97
CSMD1-209ENST00000520630 FLNBO75369 2602 aaKnown RBP9□□□□□ -0.97
CSMD1-209ENST00000520630 IGKV6-21A0A0C4DH24 114 aa8.99□□□□□ -0.97
CSMD1-209ENST00000520630 TMEM150BA6NC51 233 aa8.99□□□□□ -0.97
CSMD1-209ENST00000520630 GAS2O43903 313 aaKnown RBP8.99□□□□□ -0.97
CSMD1-209ENST00000520630 ZMYND10O75800 440 aa8.99□□□□□ -0.97
CSMD1-209ENST00000520630 POMCP01189 267 aa8.99□□□□□ -0.97
CSMD1-209ENST00000520630 ALDH2P05091 517 aa8.99□□□□□ -0.97
CSMD1-209ENST00000520630 ADH1AP07327 375 aa8.99□□□□□ -0.97
CSMD1-209ENST00000520630 RETP07949 1114 aa8.99□□□□□ -0.97
CSMD1-209ENST00000520630 FSHRP23945 695 aa8.99□□□□□ -0.97
CSMD1-209ENST00000520630 KIF5BP33176 963 aa8.99□□□□□ -0.97
CSMD1-209ENST00000520630 MAGEA9P43362 315 aa8.99□□□□□ -0.97
CSMD1-209ENST00000520630 NEK4P51957 841 aa8.99□□□□□ -0.97
CSMD1-209ENST00000520630 RNASELQ05823 741 aaKnown RBP8.99□□□□□ -0.97
CSMD1-209ENST00000520630 DSC1Q08554 894 aa8.99□□□□□ -0.97
CSMD1-209ENST00000520630 KRT32Q14532 448 aa8.99□□□□□ -0.97
CSMD1-209ENST00000520630 TWF2Q6IBS0 349 aaKnown RBP8.99□□□□□ -0.97
CSMD1-209ENST00000520630 MIS18BP1Q6P0N0 1132 aa8.99□□□□□ -0.97
CSMD1-209ENST00000520630 GLB1LQ6UWU2 654 aa8.99□□□□□ -0.97
CSMD1-209ENST00000520630 MAMSTRQ6ZN01 415 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms