RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 CLDN3O15551 220 aa9.78□□□□□ -0.84
CSMD1-208ENST00000520561 B4GALT4O60513 344 aa9.78□□□□□ -0.84
CSMD1-208ENST00000520561 TOM1L1O75674 476 aa9.78□□□□□ -0.84
CSMD1-208ENST00000520561 LDHAP00338 332 aaKnown RBP9.78□□□□□ -0.84
CSMD1-208ENST00000520561 HARSP12081 509 aaKnown RBP9.78□□□□□ -0.84
CSMD1-208ENST00000520561 PRKCSHP14314 528 aaPredicted RBP9.78□□□□□ -0.84
CSMD1-208ENST00000520561 EIF4BP23588 611 aaKnown RBP9.78□□□□□ -0.84
CSMD1-208ENST00000520561 PSMC2P35998 433 aaKnown RBP9.78□□□□□ -0.84
CSMD1-208ENST00000520561 UBASH3AP57075 661 aa9.78□□□□□ -0.84
CSMD1-208ENST00000520561 NOLC1Q14978 699 aaKnown RBP eCLIP9.78□□□□□ -0.84
CSMD1-208ENST00000520561 SNX17Q15036 470 aa9.78□□□□□ -0.84
CSMD1-208ENST00000520561 KRT31Q15323 416 aa9.78□□□□□ -0.84
CSMD1-208ENST00000520561 ZNF568Q3ZCX4 644 aa9.78□□□□□ -0.84
CSMD1-208ENST00000520561 SLC39A4Q6P5W5 647 aa9.78□□□□□ -0.84
CSMD1-208ENST00000520561 MPZL3Q6UWV2 235 aa9.78□□□□□ -0.84
CSMD1-208ENST00000520561 TSHZ1Q6ZSZ6 1077 aa9.78□□□□□ -0.84
CSMD1-208ENST00000520561 FAM126BQ8IXS8 530 aa9.78□□□□□ -0.84
CSMD1-208ENST00000520561 GPD1LQ8N335 351 aa9.78□□□□□ -0.84
CSMD1-208ENST00000520561 CAGE1Q8TC20 777 aa9.78□□□□□ -0.84
CSMD1-208ENST00000520561 TMEM174Q8WUU8 243 aa9.78□□□□□ -0.84
CSMD1-208ENST00000520561 ACO2Q99798 780 aaKnown RBP9.78□□□□□ -0.84
CSMD1-208ENST00000520561 ADPGKQ9BRR6 497 aa9.78□□□□□ -0.84
CSMD1-208ENST00000520561 TCHPQ9BT92 498 aa9.78□□□□□ -0.84
CSMD1-208ENST00000520561 MSTO1Q9BUK6 570 aa9.78□□□□□ -0.84
CSMD1-208ENST00000520561 PCIF1Q9H4Z3 704 aa9.78□□□□□ -0.84
CSMD1-208ENST00000520561 MINDY3Q9H8M7 445 aa9.78□□□□□ -0.84
CSMD1-208ENST00000520561 KIAA1586Q9HCI6 787 aa9.78□□□□□ -0.84
CSMD1-208ENST00000520561 DMAC2Q9NW81 257 aa9.78□□□□□ -0.84
CSMD1-208ENST00000520561 TAB2Q9NYJ8 693 aa9.78□□□□□ -0.84
CSMD1-208ENST00000520561 PES1O00541 588 aaKnown RBP9.77□□□□□ -0.85
CSMD1-208ENST00000520561 N4BP3O15049 544 aa9.77□□□□□ -0.85
CSMD1-208ENST00000520561 B4GALT5O43286 388 aa9.77□□□□□ -0.85
CSMD1-208ENST00000520561 TSPAN1O60635 241 aa9.77□□□□□ -0.85
CSMD1-208ENST00000520561 PQBP1O60828 265 aaKnown RBP9.77□□□□□ -0.85
CSMD1-208ENST00000520561 AKAP3O75969 853 aa9.77□□□□□ -0.85
CSMD1-208ENST00000520561 EDN1P05305 212 aa9.77□□□□□ -0.85
CSMD1-208ENST00000520561 KRT13P13646 458 aa9.77□□□□□ -0.85
CSMD1-208ENST00000520561 AXLP30530 894 aa9.77□□□□□ -0.85
CSMD1-208ENST00000520561 CASP4P49662 377 aa9.77□□□□□ -0.85
CSMD1-208ENST00000520561 COPB1P53618 953 aaKnown RBP9.77□□□□□ -0.85
CSMD1-208ENST00000520561 ATN1P54259 1190 aaPredicted RBP9.77□□□□□ -0.85
CSMD1-208ENST00000520561 MARSP56192 900 aaKnown RBP9.77□□□□□ -0.85
CSMD1-208ENST00000520561 PPP2R3AQ06190 1150 aa9.77□□□□□ -0.85
CSMD1-208ENST00000520561 MGAT3Q09327 533 aa9.77□□□□□ -0.85
CSMD1-208ENST00000520561 BFSP2Q13515 415 aa9.77□□□□□ -0.85
CSMD1-208ENST00000520561 AMHR2Q16671 573 aa9.77□□□□□ -0.85
CSMD1-208ENST00000520561 MAN2A1Q16706 1144 aa9.77□□□□□ -0.85
CSMD1-208ENST00000520561 DCAF17Q5H9S7 520 aaPredicted RBP9.77□□□□□ -0.85
CSMD1-208ENST00000520561 FRMD5Q7Z6J6 570 aa9.77□□□□□ -0.85
CSMD1-208ENST00000520561 USP37Q86T82 979 aa9.77□□□□□ -0.85
CSMD1-208ENST00000520561 IRF2BP1Q8IU81 584 aa9.77□□□□□ -0.85
CSMD1-208ENST00000520561 DIS3LQ8TF46 1054 aaKnown RBP9.77□□□□□ -0.85
CSMD1-208ENST00000520561 DHX38Q92620 1227 aaKnown RBP9.77□□□□□ -0.85
CSMD1-208ENST00000520561 WNT8BQ93098 351 aa9.77□□□□□ -0.85
CSMD1-208ENST00000520561 SAAL1Q96ER3 474 aa9.77□□□□□ -0.85
CSMD1-208ENST00000520561 NOC4LQ9BVI4 516 aaKnown RBP9.77□□□□□ -0.85
CSMD1-208ENST00000520561 TRPV6Q9H1D0 765 aa9.77□□□□□ -0.85
CSMD1-208ENST00000520561 C11orf49Q9H6J7 331 aa9.77□□□□□ -0.85
CSMD1-208ENST00000520561 IFNKQ9P0W0 207 aa9.77□□□□□ -0.85
CSMD1-208ENST00000520561 ARMCX3Q9UH62 379 aaPredicted RBP9.77□□□□□ -0.85
CSMD1-208ENST00000520561 AGO2Q9UKV8 859 aaKnown RBP9.77□□□□□ -0.85
CSMD1-208ENST00000520561 PIN4Q9Y237 131 aaKnown RBP9.77□□□□□ -0.85
CSMD1-208ENST00000520561 TNFSF13BQ9Y275 285 aa9.77□□□□□ -0.85
CSMD1-208ENST00000520561 STYXL1Q9Y6J8 313 aa9.77□□□□□ -0.85
CSMD1-208ENST00000520561 TRIP12Q14669 1992 aaPredicted RBP9.77□□□□□ -0.85
CSMD1-208ENST00000520561 A0A0B4J269 797 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 GOLGA8IPA6NC78 632 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 ZNF233A6NK53 670 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 GOLGA8JA6NMD2 632 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 LGALS16A8MUM7 142 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 DCDC2CA8MYV0 355 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 MAPK13O15264 365 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 OGTO15294 1046 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 EXTL3O43909 919 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 CSDE1O75534 798 aaKnown RBP9.76□□□□□ -0.85
CSMD1-208ENST00000520561 RPS6KA5O75582 802 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 ADCY5O95622 1261 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 MCF2P10911 925 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 COL6A1P12109 1028 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 ARF4P18085 180 aaPredicted RBP9.76□□□□□ -0.85
CSMD1-208ENST00000520561 FGFR4P22455 802 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 PROZP22891 400 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 ADSSP30520 456 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 MNX1P50219 401 aaPredicted RBP9.76□□□□□ -0.85
CSMD1-208ENST00000520561 CDK7P50613 346 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 ZNF75DP51815 510 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 MCL1Q07820 350 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 BFSP1Q12934 665 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 SNRNP35Q16560 246 aaKnown RBP9.76□□□□□ -0.85
CSMD1-208ENST00000520561 KYAT1Q16773 422 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 TRIM71Q2Q1W2 868 aaKnown RBP9.76□□□□□ -0.85
CSMD1-208ENST00000520561 DCAF4L1Q3SXM0 396 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 TRIM60Q495X7 471 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 FAM26DQ5JW98 314 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 FKBP15Q5T1M5 1219 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 TCERG1LQ5VWI1 586 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 NOTUMQ6P988 496 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 SLC39A5Q6ZMH5 540 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 INTS8Q75QN2 995 aaKnown RBP9.76□□□□□ -0.85
CSMD1-208ENST00000520561 NECAB2Q7Z6G3 386 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms