RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 PRDM12Q9H4Q4 367 aa6.11□□□□□ -1.43
SKP1-207ENST00000520417 PEX11BO96011 259 aa6.1□□□□□ -1.43
SKP1-207ENST00000520417 UGT8Q16880 541 aa6.1□□□□□ -1.43
SKP1-207ENST00000520417 CCDC178Q5BJE1 867 aa6.1□□□□□ -1.43
SKP1-207ENST00000520417 PITRM1Q5JRX3 1037 aa6.1□□□□□ -1.43
SKP1-207ENST00000520417 EAF2Q96CJ1 260 aaPredicted RBP6.1□□□□□ -1.43
SKP1-207ENST00000520417 TTPALQ9BTX7 342 aa6.1□□□□□ -1.43
SKP1-207ENST00000520417 KCTD10Q9H3F6 313 aa6.1□□□□□ -1.43
SKP1-207ENST00000520417 IFT22Q9H7X7 185 aa6.1□□□□□ -1.43
SKP1-207ENST00000520417 GPRC5BQ9NZH0 403 aa6.1□□□□□ -1.43
SKP1-207ENST00000520417 C11orf21Q9P2W6 132 aa6.1□□□□□ -1.43
SKP1-207ENST00000520417 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.09□□□□□ -1.43
SKP1-207ENST00000520417 A0A1W2PR48 441 aa6.09□□□□□ -1.43
SKP1-207ENST00000520417 PRR5-ARHGAP8B1AHC4 643 aa6.09□□□□□ -1.43
SKP1-207ENST00000520417 NEMP1O14524 444 aa6.09□□□□□ -1.43
SKP1-207ENST00000520417 RAMP2O60895 175 aa6.09□□□□□ -1.43
SKP1-207ENST00000520417 LTA4HP09960 611 aaKnown RBP6.09□□□□□ -1.43
SKP1-207ENST00000520417 GYPEP15421 78 aa6.09□□□□□ -1.43
SKP1-207ENST00000520417 CCT2P78371 535 aaKnown RBP6.09□□□□□ -1.43
SKP1-207ENST00000520417 APBA1Q02410 837 aa6.09□□□□□ -1.43
SKP1-207ENST00000520417 MRPL49Q13405 166 aaKnown RBP6.09□□□□□ -1.43
SKP1-207ENST00000520417 DCAF17Q5H9S7 520 aaPredicted RBP6.09□□□□□ -1.43
SKP1-207ENST00000520417 CT47A1Q5JQC4 288 aaPredicted RBP6.09□□□□□ -1.43
SKP1-207ENST00000520417 MRGPRGQ86SM5 289 aa6.09□□□□□ -1.43
SKP1-207ENST00000520417 AMER2Q8N7J2 671 aa6.09□□□□□ -1.43
SKP1-207ENST00000520417 WNT8AQ9H1J5 351 aa6.09□□□□□ -1.43
SKP1-207ENST00000520417 TOPORSQ9NS56 1045 aaPredicted RBP6.09□□□□□ -1.43
SKP1-207ENST00000520417 TMPRSS11EQ9UL52 423 aa6.09□□□□□ -1.43
SKP1-207ENST00000520417 OVOL3O00110 214 aa6.08□□□□□ -1.44
SKP1-207ENST00000520417 CDK17Q00537 523 aa6.08□□□□□ -1.44
SKP1-207ENST00000520417 PDCD1Q15116 288 aa6.08□□□□□ -1.44
SKP1-207ENST00000520417 DHCR24Q15392 516 aa6.08□□□□□ -1.44
SKP1-207ENST00000520417 PLEKHG4Q58EX7 1191 aa6.08□□□□□ -1.44
SKP1-207ENST00000520417 ABHD15Q6UXT9 468 aa6.08□□□□□ -1.44
SKP1-207ENST00000520417 MDM1Q8TC05 714 aa6.08□□□□□ -1.44
SKP1-207ENST00000520417 PROKR1Q8TCW9 393 aa6.08□□□□□ -1.44
SKP1-207ENST00000520417 RSAD2Q8WXG1 361 aa6.08□□□□□ -1.44
SKP1-207ENST00000520417 CPEB1Q9BZB8 566 aaKnown RBP6.08□□□□□ -1.44
SKP1-207ENST00000520417 ENKD1Q9H0I2 346 aa6.08□□□□□ -1.44
SKP1-207ENST00000520417 TRPS1Q9UHF7 1281 aa6.08□□□□□ -1.44
SKP1-207ENST00000520417 TBX22Q9Y458 520 aa6.08□□□□□ -1.44
SKP1-207ENST00000520417 CDY2AQ9Y6F7 541 aa6.08□□□□□ -1.44
SKP1-207ENST00000520417 ZMYM3Q14202 1370 aa6.07□□□□□ -1.44
SKP1-207ENST00000520417 ULK1O75385 1050 aa6.07□□□□□ -1.44
SKP1-207ENST00000520417 BPIP17213 487 aa6.07□□□□□ -1.44
SKP1-207ENST00000520417 APOBEC3AP31941 199 aaPredicted RBP6.07□□□□□ -1.44
SKP1-207ENST00000520417 PTTG1IPP53801 180 aa6.07□□□□□ -1.44
SKP1-207ENST00000520417 WNT3AP56704 352 aa6.07□□□□□ -1.44
SKP1-207ENST00000520417 VPS72Q15906 364 aa6.07□□□□□ -1.44
SKP1-207ENST00000520417 KCNV1Q6PIU1 500 aa6.07□□□□□ -1.44
SKP1-207ENST00000520417 HTR3DQ70Z44 454 aa6.07□□□□□ -1.44
SKP1-207ENST00000520417 STRA8Q7Z7C7 330 aa6.07□□□□□ -1.44
SKP1-207ENST00000520417 LDLRAD3Q86YD5 345 aa6.07□□□□□ -1.44
SKP1-207ENST00000520417 LYSMD2Q8IV50 215 aa6.07□□□□□ -1.44
SKP1-207ENST00000520417 CLRN3Q8NCR9 226 aa6.07□□□□□ -1.44
SKP1-207ENST00000520417 TGFBRAP1Q8WUH2 860 aa6.07□□□□□ -1.44
SKP1-207ENST00000520417 LSM14BQ9BX40 385 aaKnown RBP6.07□□□□□ -1.44
SKP1-207ENST00000520417 TRPM5Q9NZQ8 1165 aa6.07□□□□□ -1.44
SKP1-207ENST00000520417 POGKQ9P215 609 aa6.07□□□□□ -1.44
SKP1-207ENST00000520417 DPP7Q9UHL4 492 aa6.07□□□□□ -1.44
SKP1-207ENST00000520417 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.07□□□□□ -1.44
SKP1-207ENST00000520417 TMA7Q9Y2S6 64 aaKnown RBP6.07□□□□□ -1.44
SKP1-207ENST00000520417 TLDC2A0PJX2 215 aa6.06□□□□□ -1.44
SKP1-207ENST00000520417 TMEM191CA6NGB0 347 aa6.06□□□□□ -1.44
SKP1-207ENST00000520417 GOLGA8AA7E2F4 631 aa6.06□□□□□ -1.44
SKP1-207ENST00000520417 ITGA10O75578 1167 aa6.06□□□□□ -1.44
SKP1-207ENST00000520417 ABHD16AO95870 558 aa6.06□□□□□ -1.44
SKP1-207ENST00000520417 SESN3P58005 492 aa6.06□□□□□ -1.44
SKP1-207ENST00000520417 PTPAQ15257 358 aa6.06□□□□□ -1.44
SKP1-207ENST00000520417 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.06□□□□□ -1.44
SKP1-207ENST00000520417 TIGD2Q4W5G0 525 aa6.06□□□□□ -1.44
SKP1-207ENST00000520417 NAIF1Q69YI7 327 aaPredicted RBP6.06□□□□□ -1.44
SKP1-207ENST00000520417 LAIR1Q6GTX8 287 aa6.06□□□□□ -1.44
SKP1-207ENST00000520417 MRGPREQ86SM8 312 aa6.06□□□□□ -1.44
SKP1-207ENST00000520417 RNF180Q86T96 592 aa6.06□□□□□ -1.44
SKP1-207ENST00000520417 THNSL2Q86YJ6 484 aa6.06□□□□□ -1.44
SKP1-207ENST00000520417 OR52N2Q8NGI0 321 aa6.06□□□□□ -1.44
SKP1-207ENST00000520417 NDC1Q9BTX1 674 aa6.06□□□□□ -1.44
SKP1-207ENST00000520417 QRSL1Q9H0R6 528 aaKnown RBP6.06□□□□□ -1.44
SKP1-207ENST00000520417 ZNF768Q9H5H4 540 aaKnown RBP6.06□□□□□ -1.44
SKP1-207ENST00000520417 ZEB2O60315 1214 aa6.05□□□□□ -1.44
SKP1-207ENST00000520417 TMEM127O75204 238 aa6.05□□□□□ -1.44
SKP1-207ENST00000520417 CTSSP25774 331 aa6.05□□□□□ -1.44
SKP1-207ENST00000520417 ADSLP30566 484 aaPredicted RBP6.05□□□□□ -1.44
SKP1-207ENST00000520417 SOX5P35711 763 aa6.05□□□□□ -1.44
SKP1-207ENST00000520417 SCAND1P57086 179 aa6.05□□□□□ -1.44
SKP1-207ENST00000520417 LY6G5CQ5SRR4 150 aa6.05□□□□□ -1.44
SKP1-207ENST00000520417 ANKS6Q68DC2 871 aa6.05□□□□□ -1.44
SKP1-207ENST00000520417 IQSEC1Q6DN90 963 aa6.05□□□□□ -1.44
SKP1-207ENST00000520417 VRK3Q8IV63 474 aa6.05□□□□□ -1.44
SKP1-207ENST00000520417 RPUSD2Q8IZ73 545 aaKnown RBP6.05□□□□□ -1.44
SKP1-207ENST00000520417 RNF169Q8NCN4 708 aa6.05□□□□□ -1.44
SKP1-207ENST00000520417 CHAC2Q8WUX2 184 aa6.05□□□□□ -1.44
SKP1-207ENST00000520417 SNX33Q8WV41 574 aa6.05□□□□□ -1.44
SKP1-207ENST00000520417 PHACTR3Q96KR7 559 aa6.05□□□□□ -1.44
SKP1-207ENST00000520417 PRRX2Q99811 253 aa6.05□□□□□ -1.44
SKP1-207ENST00000520417 PDCD2LQ9BRP1 358 aa6.05□□□□□ -1.44
SKP1-207ENST00000520417 MLST8Q9BVC4 326 aa6.05□□□□□ -1.44
SKP1-207ENST00000520417 KCNH6Q9H252 994 aa6.05□□□□□ -1.44
SKP1-207ENST00000520417 CAAP1Q9H8G2 361 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms