RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 IKZF4Q9H2S9 585 aa19.5■□□□□ 0.71
SDC2-205ENST00000520233 SEMA6BQ9H3T3 888 aa19.5■□□□□ 0.71
SDC2-205ENST00000520233 TRAF3IP3Q9Y228 551 aa19.5■□□□□ 0.71
SDC2-205ENST00000520233 PIN4Q9Y237 131 aaKnown RBP19.5■□□□□ 0.71
SDC2-205ENST00000520233 STYXL1Q9Y6J8 313 aa19.5■□□□□ 0.71
SDC2-205ENST00000520233 ANKRD63C9JTQ0 380 aa19.49■□□□□ 0.71
SDC2-205ENST00000520233 CALUO43852 315 aaPredicted RBP19.49■□□□□ 0.71
SDC2-205ENST00000520233 PROZP22891 400 aa19.49■□□□□ 0.71
SDC2-205ENST00000520233 ERCC5P28715 1186 aaPredicted RBP19.49■□□□□ 0.71
SDC2-205ENST00000520233 ZNF445P59923 1031 aa19.49■□□□□ 0.71
SDC2-205ENST00000520233 PAK1Q13153 545 aa19.49■□□□□ 0.71
SDC2-205ENST00000520233 ZCWPW2Q504Y3 356 aa19.49■□□□□ 0.71
SDC2-205ENST00000520233 SLFN12LQ6IEE8 588 aa19.49■□□□□ 0.71
SDC2-205ENST00000520233 FOXR2Q6PJQ5 311 aa19.49■□□□□ 0.71
SDC2-205ENST00000520233 LRSAM1Q6UWE0 723 aa19.49■□□□□ 0.71
SDC2-205ENST00000520233 DBF4BQ8NFT6 615 aa19.49■□□□□ 0.71
SDC2-205ENST00000520233 SEPT8Q92599 483 aa19.49■□□□□ 0.71
SDC2-205ENST00000520233 CCDC51Q96ER9 411 aa19.49■□□□□ 0.71
SDC2-205ENST00000520233 TMX1Q9H3N1 280 aa19.49■□□□□ 0.71
SDC2-205ENST00000520233 PDZD7Q9H5P4 517 aa19.49■□□□□ 0.71
SDC2-205ENST00000520233 PTPRHQ9HD43 1115 aa19.49■□□□□ 0.71
SDC2-205ENST00000520233 AGPAT3Q9NRZ7 376 aa19.49■□□□□ 0.71
SDC2-205ENST00000520233 RWDD2AQ9UIY3 292 aa19.49■□□□□ 0.71
SDC2-205ENST00000520233 CTNND2Q9UQB3 1225 aa19.49■□□□□ 0.71
SDC2-205ENST00000520233 BICDL2A1A5D9 508 aa19.48■□□□□ 0.71
SDC2-205ENST00000520233 CSF2RAP15509 400 aa19.48■□□□□ 0.71
SDC2-205ENST00000520233 ZSCAN20P17040 1043 aaPredicted RBP19.48■□□□□ 0.71
SDC2-205ENST00000520233 DSC3Q14574 896 aa19.48■□□□□ 0.71
SDC2-205ENST00000520233 C11orf57Q6ZUT1 292 aaPredicted RBP19.48■□□□□ 0.71
SDC2-205ENST00000520233 DEFB128Q7Z7B8 93 aa19.48■□□□□ 0.71
SDC2-205ENST00000520233 RPUSD2Q8IZ73 545 aaKnown RBP19.48■□□□□ 0.71
SDC2-205ENST00000520233 TSG101Q99816 390 aa19.48■□□□□ 0.71
SDC2-205ENST00000520233 FTHL17Q9BXU8 183 aa19.48■□□□□ 0.71
SDC2-205ENST00000520233 DNAJC25Q9H1X3 360 aa19.48■□□□□ 0.71
SDC2-205ENST00000520233 NR2E3Q9Y5X4 410 aa19.48■□□□□ 0.71
SDC2-205ENST00000520233 TISP43B9A030 160 aa19.47■□□□□ 0.71
SDC2-205ENST00000520233 ABLIM1O14639 778 aa19.47■□□□□ 0.71
SDC2-205ENST00000520233 CLDN3O15551 220 aa19.47■□□□□ 0.71
SDC2-205ENST00000520233 PFKMP08237 780 aa19.47■□□□□ 0.71
SDC2-205ENST00000520233 SYN1P17600 705 aa19.47■□□□□ 0.71
SDC2-205ENST00000520233 GARTP22102 1010 aa19.47■□□□□ 0.71
SDC2-205ENST00000520233 ADSSP30520 456 aa19.47■□□□□ 0.71
SDC2-205ENST00000520233 PMS1P54277 932 aaKnown RBP19.47■□□□□ 0.71
SDC2-205ENST00000520233 LRRC63Q05C16 580 aa19.47■□□□□ 0.71
SDC2-205ENST00000520233 MCL1Q07820 350 aa19.47■□□□□ 0.71
SDC2-205ENST00000520233 NFIL3Q16649 462 aa19.47■□□□□ 0.71
SDC2-205ENST00000520233 EDRF1Q3B7T1 1238 aa19.47■□□□□ 0.71
SDC2-205ENST00000520233 ANO6Q4KMQ2 910 aa19.47■□□□□ 0.71
SDC2-205ENST00000520233 EEF1DP3Q658K8 133 aa19.47■□□□□ 0.71
SDC2-205ENST00000520233 ANKRD40Q6AI12 368 aa19.47■□□□□ 0.71
SDC2-205ENST00000520233 SLC27A1Q6PCB7 646 aa19.47■□□□□ 0.71
SDC2-205ENST00000520233 MPZL3Q6UWV2 235 aa19.47■□□□□ 0.71
SDC2-205ENST00000520233 APBB1IPQ7Z5R6 666 aaPredicted RBP19.47■□□□□ 0.71
SDC2-205ENST00000520233 C12orf56Q8IXR9 622 aa19.47■□□□□ 0.71
SDC2-205ENST00000520233 TMEM174Q8WUU8 243 aa19.47■□□□□ 0.71
SDC2-205ENST00000520233 BADQ92934 168 aa19.47■□□□□ 0.71
SDC2-205ENST00000520233 VWCEQ96DN2 955 aa19.47■□□□□ 0.71
SDC2-205ENST00000520233 ZBTB45Q96K62 511 aaPredicted RBP19.47■□□□□ 0.71
SDC2-205ENST00000520233 ADPGKQ9BRR6 497 aa19.47■□□□□ 0.71
SDC2-205ENST00000520233 TCHPQ9BT92 498 aa19.47■□□□□ 0.71
SDC2-205ENST00000520233 NAT10Q9H0A0 1025 aaKnown RBP19.47■□□□□ 0.71
SDC2-205ENST00000520233 ZMYND8Q9ULU4 1186 aaPredicted RBP19.47■□□□□ 0.71
SDC2-205ENST00000520233 A0A0B4J269 797 aa19.46■□□□□ 0.71
SDC2-205ENST00000520233 TRIM49BA6NDI0 452 aa19.46■□□□□ 0.71
SDC2-205ENST00000520233 KIAA0391O15091 583 aaKnown RBP19.46■□□□□ 0.71
SDC2-205ENST00000520233 MGEA5O60502 916 aa19.46■□□□□ 0.71
SDC2-205ENST00000520233 MCF2P10911 925 aa19.46■□□□□ 0.71
SDC2-205ENST00000520233 FPGSQ05932 587 aa19.46■□□□□ 0.71
SDC2-205ENST00000520233 PPIGQ13427 754 aaKnown RBP eCLIP19.46■□□□□ 0.71
SDC2-205ENST00000520233 MYBPC2Q14324 1141 aa19.46■□□□□ 0.71
SDC2-205ENST00000520233 DCAF4L1Q3SXM0 396 aa19.46■□□□□ 0.71
SDC2-205ENST00000520233 ZNF568Q3ZCX4 644 aa19.46■□□□□ 0.71
SDC2-205ENST00000520233 UBXN11Q5T124 520 aa19.46■□□□□ 0.71
SDC2-205ENST00000520233 TTI2Q6NXR4 508 aa19.46■□□□□ 0.71
SDC2-205ENST00000520233 ARMCX5Q6P1M9 558 aa19.46■□□□□ 0.71
SDC2-205ENST00000520233 CNKSR3Q6P9H4 555 aa19.46■□□□□ 0.71
SDC2-205ENST00000520233 CDR2LQ86X02 465 aaPredicted RBP19.46■□□□□ 0.71
SDC2-205ENST00000520233 POMGNT1Q8WZA1 660 aa19.46■□□□□ 0.71
SDC2-205ENST00000520233 TRAIPQ9BWF2 469 aa19.46■□□□□ 0.71
SDC2-205ENST00000520233 HAPLN2Q9GZV7 340 aa19.46■□□□□ 0.71
SDC2-205ENST00000520233 IL23AQ9NPF7 189 aa19.46■□□□□ 0.71
SDC2-205ENST00000520233 ANKFY1Q9P2R3 1169 aa19.46■□□□□ 0.71
SDC2-205ENST00000520233 RBAK-RBAKDNI3L0D1 243 aa19.45■□□□□ 0.7
SDC2-205ENST00000520233 CLIC2O15247 247 aa19.45■□□□□ 0.7
SDC2-205ENST00000520233 CAVIN2O95810 425 aa19.45■□□□□ 0.7
SDC2-205ENST00000520233 MATR3P43243 847 aaKnown RBP eCLIP19.45■□□□□ 0.72e-7■□□□□ 11.2
SDC2-205ENST00000520233 RGS19P49795 217 aa19.45■□□□□ 0.7
SDC2-205ENST00000520233 STX17P56962 302 aa19.45■□□□□ 0.7
SDC2-205ENST00000520233 NOLC1Q14978 699 aaKnown RBP eCLIP19.45■□□□□ 0.7
SDC2-205ENST00000520233 TWF2Q6IBS0 349 aaKnown RBP19.45■□□□□ 0.7
SDC2-205ENST00000520233 ZBTB33Q86T24 672 aa19.45■□□□□ 0.7
SDC2-205ENST00000520233 SLC9A9Q8IVB4 645 aa19.45■□□□□ 0.7
SDC2-205ENST00000520233 MED15Q96RN5 788 aa19.45■□□□□ 0.7
SDC2-205ENST00000520233 ADAM2Q99965 735 aa19.45■□□□□ 0.7
SDC2-205ENST00000520233 BPIFA3Q9BQP9 254 aa19.45■□□□□ 0.7
SDC2-205ENST00000520233 CBWD1Q9BRT8 395 aa19.45■□□□□ 0.7
SDC2-205ENST00000520233 CDT1Q9H211 546 aa19.45■□□□□ 0.7
SDC2-205ENST00000520233 TSPY26PQ9H489 355 aa19.45■□□□□ 0.7
SDC2-205ENST00000520233 RGS18Q9NS28 235 aa19.45■□□□□ 0.7
SDC2-205ENST00000520233 SCN5AQ14524 2016 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms