RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 ARL5CA6NH57 179 aa13.82□□□□□ -0.2
CSMD1-205ENST00000519623 MED24O75448 989 aa13.82□□□□□ -0.2
CSMD1-205ENST00000519623 EFEMP2O95967 443 aa13.82□□□□□ -0.2
CSMD1-205ENST00000519623 WEE2P0C1S8 567 aa13.82□□□□□ -0.2
CSMD1-205ENST00000519623 ARF4P18085 180 aaPredicted RBP13.82□□□□□ -0.2
CSMD1-205ENST00000519623 DSC1Q08554 894 aa13.82□□□□□ -0.2
CSMD1-205ENST00000519623 NCBP1Q09161 790 aaKnown RBP13.82□□□□□ -0.2
CSMD1-205ENST00000519623 SAFBQ15424 915 aaKnown RBP eCLIP13.82□□□□□ -0.2
CSMD1-205ENST00000519623 TAS1R1Q7RTX1 841 aa13.82□□□□□ -0.2
CSMD1-205ENST00000519623 CCDC83Q8IWF9 413 aa13.82□□□□□ -0.2
CSMD1-205ENST00000519623 COLGALT2Q8IYK4 626 aa13.82□□□□□ -0.2
CSMD1-205ENST00000519623 FEZF2Q8TBJ5 459 aa13.82□□□□□ -0.2
CSMD1-205ENST00000519623 PBXIP1Q96AQ6 731 aa13.82□□□□□ -0.2
CSMD1-205ENST00000519623 C8orf76Q96K31 380 aa13.82□□□□□ -0.2
CSMD1-205ENST00000519623 FBXL18Q96ME1 805 aa13.82□□□□□ -0.2
CSMD1-205ENST00000519623 NECTIN4Q96NY8 510 aa13.82□□□□□ -0.2
CSMD1-205ENST00000519623 KLHL5Q96PQ7 755 aa13.82□□□□□ -0.2
CSMD1-205ENST00000519623 FAM193BQ96PV7 902 aaPredicted RBP13.82□□□□□ -0.2
CSMD1-205ENST00000519623 GAD1Q99259 594 aa13.82□□□□□ -0.2
CSMD1-205ENST00000519623 KIF2CQ99661 725 aa13.82□□□□□ -0.2
CSMD1-205ENST00000519623 LLPHQ9BRT6 129 aaKnown RBP13.82□□□□□ -0.2
CSMD1-205ENST00000519623 POLR3CQ9BUI4 534 aaPredicted RBP13.82□□□□□ -0.2
CSMD1-205ENST00000519623 POLR3FQ9H1D9 316 aaPredicted RBP13.82□□□□□ -0.2
CSMD1-205ENST00000519623 TUFT1Q9NNX1 390 aa13.82□□□□□ -0.2
CSMD1-205ENST00000519623 STK39Q9UEW8 545 aa13.82□□□□□ -0.2
CSMD1-205ENST00000519623 A0A1B0GUA9 196 aa13.81□□□□□ -0.2
CSMD1-205ENST00000519623 B4GALT5O43286 388 aa13.81□□□□□ -0.2
CSMD1-205ENST00000519623 CNPP09543 421 aaKnown RBP13.81□□□□□ -0.2
CSMD1-205ENST00000519623 SP100P23497 879 aaPredicted RBP13.81□□□□□ -0.2
CSMD1-205ENST00000519623 MTHFRP42898 656 aa13.81□□□□□ -0.2
CSMD1-205ENST00000519623 SIGLEC14Q08ET2 396 aa13.81□□□□□ -0.2
CSMD1-205ENST00000519623 ZNF174Q15697 407 aa13.81□□□□□ -0.2
CSMD1-205ENST00000519623 PTPN21Q16825 1174 aa13.81□□□□□ -0.2
CSMD1-205ENST00000519623 RARS2Q5T160 578 aaKnown RBP13.81□□□□□ -0.2
CSMD1-205ENST00000519623 TMEM87AQ8NBN3 555 aa13.81□□□□□ -0.2
CSMD1-205ENST00000519623 GSTCDQ8NEC7 633 aa13.81□□□□□ -0.2
CSMD1-205ENST00000519623 FBXO18Q8NFZ0 1043 aa13.81□□□□□ -0.2
CSMD1-205ENST00000519623 ASIC4Q96FT7 647 aa13.81□□□□□ -0.2
CSMD1-205ENST00000519623 ZFP42Q96MM3 310 aa13.81□□□□□ -0.2
CSMD1-205ENST00000519623 NACC1Q96RE7 527 aa13.81□□□□□ -0.2
CSMD1-205ENST00000519623 FOXP1Q9H334 677 aaPredicted RBP13.81□□□□□ -0.2
CSMD1-205ENST00000519623 GPRC5CQ9NQ84 441 aa13.81□□□□□ -0.2
CSMD1-205ENST00000519623 DZANK1Q9NVP4 752 aa13.81□□□□□ -0.2
CSMD1-205ENST00000519623 MARCH5Q9NX47 278 aa13.81□□□□□ -0.2
CSMD1-205ENST00000519623 DBR1Q9UK59 544 aaKnown RBP13.81□□□□□ -0.2
CSMD1-205ENST00000519623 NR2E1Q9Y466 385 aa13.81□□□□□ -0.2
CSMD1-205ENST00000519623 WDFY4Q6ZS81 3184 aa13.81□□□□□ -0.2
CSMD1-205ENST00000519623 C2CD4DB7Z1M9 353 aa13.8□□□□□ -0.2
CSMD1-205ENST00000519623 USO1O60763 962 aaKnown RBP13.8□□□□□ -0.2
CSMD1-205ENST00000519623 SSBP05455 408 aaKnown RBP eCLIP13.8□□□□□ -0.2
CSMD1-205ENST00000519623 RPA1P27694 616 aa13.8□□□□□ -0.2
CSMD1-205ENST00000519623 MLH1P40692 756 aa13.8□□□□□ -0.2
CSMD1-205ENST00000519623 CLCN4P51793 760 aa13.8□□□□□ -0.2
CSMD1-205ENST00000519623 ATAT1Q5SQI0 421 aa13.8□□□□□ -0.2
CSMD1-205ENST00000519623 MAEAQ7L5Y9 396 aa13.8□□□□□ -0.2
CSMD1-205ENST00000519623 PPFIBP1Q86W92 1011 aa13.8□□□□□ -0.2
CSMD1-205ENST00000519623 CDR2LQ86X02 465 aaPredicted RBP13.8□□□□□ -0.2
CSMD1-205ENST00000519623 RNF168Q8IYW5 571 aaPredicted RBP13.8□□□□□ -0.2
CSMD1-205ENST00000519623 C4orf32Q8N8J7 132 aa13.8□□□□□ -0.2
CSMD1-205ENST00000519623 ZSCAN31Q96LW9 406 aaPredicted RBP13.8□□□□□ -0.2
CSMD1-205ENST00000519623 RIPOR3Q96MK2 946 aa13.8□□□□□ -0.2
CSMD1-205ENST00000519623 CCDC43Q96MW1 224 aaKnown RBP13.8□□□□□ -0.2
CSMD1-205ENST00000519623 EMILIN2Q9BXX0 1053 aa13.8□□□□□ -0.2
CSMD1-205ENST00000519623 FZD8Q9H461 694 aa13.8□□□□□ -0.2
CSMD1-205ENST00000519623 NXF3Q9H4D5 531 aaKnown RBP13.8□□□□□ -0.2
CSMD1-205ENST00000519623 GIT1Q9Y2X7 761 aa13.8□□□□□ -0.2
CSMD1-205ENST00000519623 PRG3Q9Y2Y8 225 aaPredicted RBP13.8□□□□□ -0.2
CSMD1-205ENST00000519623 TDRD15B5MCY1 1934 aaKnown RBP13.8□□□□□ -0.2
CSMD1-205ENST00000519623 F8W810 466 aa13.79□□□□□ -0.2
CSMD1-205ENST00000519623 SOD2P04179 222 aa13.79□□□□□ -0.2
CSMD1-205ENST00000519623 OR52Z1P0C646 297 aa13.79□□□□□ -0.2
CSMD1-205ENST00000519623 AKAP5P24588 427 aa13.79□□□□□ -0.2
CSMD1-205ENST00000519623 KLRC2P26717 231 aa13.79□□□□□ -0.2
CSMD1-205ENST00000519623 OR1G1P47890 313 aa13.79□□□□□ -0.2
CSMD1-205ENST00000519623 RBM25P49756 843 aaKnown RBP13.79□□□□□ -0.2
CSMD1-205ENST00000519623 SCNN1GP51170 649 aa13.79□□□□□ -0.2
CSMD1-205ENST00000519623 ORC2Q13416 577 aaPredicted RBP13.79□□□□□ -0.2
CSMD1-205ENST00000519623 IER5LQ5T953 404 aa13.79□□□□□ -0.2
CSMD1-205ENST00000519623 KIAA0319Q5VV43 1072 aa13.79□□□□□ -0.2
CSMD1-205ENST00000519623 CDCA2Q69YH5 1023 aaPredicted RBP13.79□□□□□ -0.2
CSMD1-205ENST00000519623 KIAA1841Q6NSI8 718 aa13.79□□□□□ -0.2
CSMD1-205ENST00000519623 SLC27A1Q6PCB7 646 aa13.79□□□□□ -0.2
CSMD1-205ENST00000519623 PPP4R3CPQ6ZMV5 832 aa13.79□□□□□ -0.2
CSMD1-205ENST00000519623 CABP7Q86V35 215 aa13.79□□□□□ -0.2
CSMD1-205ENST00000519623 MCPH1Q8NEM0 835 aa13.79□□□□□ -0.2
CSMD1-205ENST00000519623 APOL6Q9BWW8 343 aa13.79□□□□□ -0.2
CSMD1-205ENST00000519623 TSHZ2Q9NRE2 1034 aa13.79□□□□□ -0.2
CSMD1-205ENST00000519623 MRPL17Q9NRX2 175 aaKnown RBP13.79□□□□□ -0.2
CSMD1-205ENST00000519623 LRRIQ4A6NIV6 560 aa13.78□□□□□ -0.2
CSMD1-205ENST00000519623 TTLL13PA6NNM8 815 aa13.78□□□□□ -0.2
CSMD1-205ENST00000519623 NPTXRO95502 500 aa13.78□□□□□ -0.2
CSMD1-205ENST00000519623 CYP11B2P19099 503 aa13.78□□□□□ -0.2
CSMD1-205ENST00000519623 HMGN5P82970 282 aaKnown RBP13.78□□□□□ -0.2
CSMD1-205ENST00000519623 NHLH1Q02575 133 aa13.78□□□□□ -0.2
CSMD1-205ENST00000519623 ECM1Q16610 540 aa13.78□□□□□ -0.2
CSMD1-205ENST00000519623 FAM187BQ17R55 369 aa13.78□□□□□ -0.2
CSMD1-205ENST00000519623 TTC38Q5R3I4 469 aa13.78□□□□□ -0.2
CSMD1-205ENST00000519623 POTEGQ6S5H5 508 aa13.78□□□□□ -0.2
CSMD1-205ENST00000519623 PADI6Q6TGC4 694 aa13.78□□□□□ -0.2
CSMD1-205ENST00000519623 TMC5Q6UXY8 1006 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms