RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 ANKFY1Q9P2R3 1169 aa15.49■□□□□ 0.07
SDC2-203ENST00000519587 PADI3Q9ULW8 664 aa15.49■□□□□ 0.07
SDC2-203ENST00000519587 CTNND2Q9UQB3 1225 aa15.49■□□□□ 0.07
SDC2-203ENST00000519587 ZMYM2Q9UBW7 1377 aa15.49■□□□□ 0.07
SDC2-203ENST00000519587 TRIM43BA6NCK2 446 aa15.48■□□□□ 0.07
SDC2-203ENST00000519587 PDXKO00764 312 aa15.48■□□□□ 0.07
SDC2-203ENST00000519587 CSDE1O75534 798 aaKnown RBP15.48■□□□□ 0.07
SDC2-203ENST00000519587 TOM1L1O75674 476 aa15.48■□□□□ 0.07
SDC2-203ENST00000519587 CCNE1P24864 410 aa15.48■□□□□ 0.07
SDC2-203ENST00000519587 CD52P31358 61 aa15.48■□□□□ 0.07
SDC2-203ENST00000519587 MATR3P43243 847 aaKnown RBP eCLIP15.48■□□□□ 0.072e-7■□□□□ 11.2
SDC2-203ENST00000519587 MBTPS1Q14703 1052 aa15.48■□□□□ 0.07
SDC2-203ENST00000519587 AMHR2Q16671 573 aa15.48■□□□□ 0.07
SDC2-203ENST00000519587 ZNF568Q3ZCX4 644 aa15.48■□□□□ 0.07
SDC2-203ENST00000519587 MFSD5Q6N075 450 aa15.48■□□□□ 0.07
SDC2-203ENST00000519587 FOXR2Q6PJQ5 311 aa15.48■□□□□ 0.07
SDC2-203ENST00000519587 MPZL3Q6UWV2 235 aa15.48■□□□□ 0.07
SDC2-203ENST00000519587 NELFBQ8WX92 580 aa15.48■□□□□ 0.07
SDC2-203ENST00000519587 P2RX5Q93086 422 aa15.48■□□□□ 0.07
SDC2-203ENST00000519587 TRIM43Q96BQ3 446 aaPredicted RBP15.48■□□□□ 0.07
SDC2-203ENST00000519587 ACO2Q99798 780 aaKnown RBP15.48■□□□□ 0.07
SDC2-203ENST00000519587 FTHL17Q9BXU8 183 aa15.48■□□□□ 0.07
SDC2-203ENST00000519587 ST3GAL5Q9UNP4 418 aa15.48■□□□□ 0.07
SDC2-203ENST00000519587 TNFSF13BQ9Y275 285 aa15.48■□□□□ 0.07
SDC2-203ENST00000519587 PPP1R3GB7ZBB8 358 aa15.47■□□□□ 0.07
SDC2-203ENST00000519587 KIAA0391O15091 583 aaKnown RBP15.47■□□□□ 0.07
SDC2-203ENST00000519587 B4GALT5O43286 388 aa15.47■□□□□ 0.07
SDC2-203ENST00000519587 ZSCAN20P17040 1043 aaPredicted RBP15.47■□□□□ 0.07
SDC2-203ENST00000519587 ARF4P18085 180 aaPredicted RBP15.47■□□□□ 0.07
SDC2-203ENST00000519587 FGFR4P22455 802 aa15.47■□□□□ 0.07
SDC2-203ENST00000519587 RPL13P26373 211 aaKnown RBP15.47■□□□□ 0.07
SDC2-203ENST00000519587 ERCC5P28715 1186 aaPredicted RBP15.47■□□□□ 0.07
SDC2-203ENST00000519587 ZNF445P59923 1031 aa15.47■□□□□ 0.07
SDC2-203ENST00000519587 KCNA1Q09470 495 aa15.47■□□□□ 0.07
SDC2-203ENST00000519587 PPIGQ13427 754 aaKnown RBP eCLIP15.47■□□□□ 0.07
SDC2-203ENST00000519587 NOLC1Q14978 699 aaKnown RBP eCLIP15.47■□□□□ 0.07
SDC2-203ENST00000519587 EDRF1Q3B7T1 1238 aa15.47■□□□□ 0.07
SDC2-203ENST00000519587 DCAF4L1Q3SXM0 396 aa15.47■□□□□ 0.07
SDC2-203ENST00000519587 ANO6Q4KMQ2 910 aa15.47■□□□□ 0.07
SDC2-203ENST00000519587 TWF2Q6IBS0 349 aaKnown RBP15.47■□□□□ 0.07
SDC2-203ENST00000519587 ARMCX5Q6P1M9 558 aa15.47■□□□□ 0.07
SDC2-203ENST00000519587 SLC27A1Q6PCB7 646 aa15.47■□□□□ 0.07
SDC2-203ENST00000519587 LRSAM1Q6UWE0 723 aa15.47■□□□□ 0.07
SDC2-203ENST00000519587 RPUSD2Q8IZ73 545 aaKnown RBP15.47■□□□□ 0.07
SDC2-203ENST00000519587 POMGNT1Q8WZA1 660 aa15.47■□□□□ 0.07
SDC2-203ENST00000519587 SCLYQ96I15 445 aa15.47■□□□□ 0.07
SDC2-203ENST00000519587 LBHD1Q9BQE6 289 aaPredicted RBP15.47■□□□□ 0.07
SDC2-203ENST00000519587 TCHPQ9BT92 498 aa15.47■□□□□ 0.07
SDC2-203ENST00000519587 TARS2Q9BW92 718 aaKnown RBP15.47■□□□□ 0.07
SDC2-203ENST00000519587 KCTD10Q9H3F6 313 aa15.47■□□□□ 0.07
SDC2-203ENST00000519587 TSPY26PQ9H489 355 aa15.47■□□□□ 0.07
SDC2-203ENST00000519587 AGO3Q9H9G7 860 aaKnown RBP15.47■□□□□ 0.07
SDC2-203ENST00000519587 AGPAT3Q9NRZ7 376 aa15.47■□□□□ 0.07
SDC2-203ENST00000519587 RWDD2AQ9UIY3 292 aa15.47■□□□□ 0.07
SDC2-203ENST00000519587 LAMA3Q16787 3333 aa15.46■□□□□ 0.07
SDC2-203ENST00000519587 CLDN3O15551 220 aa15.46■□□□□ 0.07
SDC2-203ENST00000519587 NBNO60934 754 aa15.46■□□□□ 0.07
SDC2-203ENST00000519587 CXCL10P02778 98 aa15.46■□□□□ 0.07
SDC2-203ENST00000519587 CD44P16070 742 aaKnown RBP15.46■□□□□ 0.07
SDC2-203ENST00000519587 GARTP22102 1010 aa15.46■□□□□ 0.07
SDC2-203ENST00000519587 RAB27AP51159 221 aa15.46■□□□□ 0.07
SDC2-203ENST00000519587 FPGSQ05932 587 aa15.46■□□□□ 0.07
SDC2-203ENST00000519587 KYAT1Q16773 422 aa15.46■□□□□ 0.07
SDC2-203ENST00000519587 TPD52L1Q16890 204 aaPredicted RBP15.46■□□□□ 0.07
SDC2-203ENST00000519587 PLEKHG4Q58EX7 1191 aa15.46■□□□□ 0.07
SDC2-203ENST00000519587 CENPPQ6IPU0 288 aa15.46■□□□□ 0.07
SDC2-203ENST00000519587 CNKSR3Q6P9H4 555 aa15.46■□□□□ 0.07
SDC2-203ENST00000519587 C12orf56Q8IXR9 622 aa15.46■□□□□ 0.07
SDC2-203ENST00000519587 HACE1Q8IYU2 909 aa15.46■□□□□ 0.07
SDC2-203ENST00000519587 FUCA2Q9BTY2 467 aa15.46■□□□□ 0.07
SDC2-203ENST00000519587 TRIM6Q9C030 488 aaPredicted RBP15.46■□□□□ 0.07
SDC2-203ENST00000519587 DNAJC25Q9H1X3 360 aa15.46■□□□□ 0.07
SDC2-203ENST00000519587 PDZD7Q9H5P4 517 aa15.46■□□□□ 0.07
SDC2-203ENST00000519587 RNF216Q9NWF9 866 aaPredicted RBP15.46■□□□□ 0.07
SDC2-203ENST00000519587 TRAF3IP3Q9Y228 551 aa15.46■□□□□ 0.07
SDC2-203ENST00000519587 MICAL3Q7RTP6 2002 aa15.46■□□□□ 0.07
SDC2-203ENST00000519587 A0A1B0GUA9 196 aa15.45■□□□□ 0.06
SDC2-203ENST00000519587 EFCAB14O75071 495 aa15.45■□□□□ 0.06
SDC2-203ENST00000519587 FGFR1OPO95684 399 aaKnown RBP15.45■□□□□ 0.06
SDC2-203ENST00000519587 MCF2P10911 925 aa15.45■□□□□ 0.06
SDC2-203ENST00000519587 SKIP12755 728 aa15.45■□□□□ 0.06
SDC2-203ENST00000519587 ACTN1P12814 892 aa15.45■□□□□ 0.06
SDC2-203ENST00000519587 HOXD13P35453 343 aa15.45■□□□□ 0.06
SDC2-203ENST00000519587 MYBPC2Q14324 1141 aa15.45■□□□□ 0.06
SDC2-203ENST00000519587 NFIL3Q16649 462 aa15.45■□□□□ 0.06
SDC2-203ENST00000519587 ZCWPW2Q504Y3 356 aa15.45■□□□□ 0.06
SDC2-203ENST00000519587 C11orf57Q6ZUT1 292 aaPredicted RBP15.45■□□□□ 0.06
SDC2-203ENST00000519587 DEFB128Q7Z7B8 93 aa15.45■□□□□ 0.06
SDC2-203ENST00000519587 DEFB123Q8N688 67 aa15.45■□□□□ 0.06
SDC2-203ENST00000519587 CPB2Q96IY4 423 aa15.45■□□□□ 0.06
SDC2-203ENST00000519587 MSTO1Q9BUK6 570 aa15.45■□□□□ 0.06
SDC2-203ENST00000519587 COL25A1Q9BXS0 654 aaPredicted RBP15.45■□□□□ 0.06
SDC2-203ENST00000519587 C1orf112Q9NSG2 853 aa15.45■□□□□ 0.06
SDC2-203ENST00000519587 STYXL1Q9Y6J8 313 aa15.45■□□□□ 0.06
SDC2-203ENST00000519587 TGFB1I1O43294 461 aa15.44■□□□□ 0.06
SDC2-203ENST00000519587 NR3C1P04150 777 aa15.44■□□□□ 0.06
SDC2-203ENST00000519587 EDN1P05305 212 aa15.44■□□□□ 0.06
SDC2-203ENST00000519587 CSF2RAP15509 400 aa15.44■□□□□ 0.06
SDC2-203ENST00000519587 PROZP22891 400 aa15.44■□□□□ 0.06
SDC2-203ENST00000519587 NR2F2P24468 414 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms