RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 RASEFQ8IZ41 740 aa13.83□□□□□ -0.2
TRAPPC9-204ENST00000518723 MAML2Q8IZL2 1156 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC9-204ENST00000518723 DCLK2Q8N568 766 aa13.83□□□□□ -0.2
TRAPPC9-204ENST00000518723 CNNM3Q8NE01 707 aa13.83□□□□□ -0.2
TRAPPC9-204ENST00000518723 GJA10Q969M2 543 aa13.83□□□□□ -0.2
TRAPPC9-204ENST00000518723 SHDQ96IW2 340 aa13.83□□□□□ -0.2
TRAPPC9-204ENST00000518723 CHST7Q9NS84 486 aa13.83□□□□□ -0.2
TRAPPC9-204ENST00000518723 PRG3Q9Y2Y8 225 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC9-204ENST00000518723 COL4A3BPQ9Y5P4 624 aa13.83□□□□□ -0.2
TRAPPC9-204ENST00000518723 ZFP37Q9Y6Q3 630 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC9-204ENST00000518723 FANCMQ8IYD8 2048 aa13.83□□□□□ -0.2
TRAPPC9-204ENST00000518723 CYP3A7-CYP3A51PA0A087WV96 503 aa13.82□□□□□ -0.2
TRAPPC9-204ENST00000518723 POTEMA6NI47 508 aa13.82□□□□□ -0.2
TRAPPC9-204ENST00000518723 KINO60870 393 aaKnown RBP13.82□□□□□ -0.2
TRAPPC9-204ENST00000518723 CYP3A7P24462 503 aa13.82□□□□□ -0.2
TRAPPC9-204ENST00000518723 PSMC5P62195 406 aa13.82□□□□□ -0.2
TRAPPC9-204ENST00000518723 LILRA6Q6PI73 481 aa13.82□□□□□ -0.2
TRAPPC9-204ENST00000518723 POTEGQ6S5H5 508 aa13.82□□□□□ -0.2
TRAPPC9-204ENST00000518723 EXOC8Q8IYI6 725 aa13.82□□□□□ -0.2
TRAPPC9-204ENST00000518723 SLC7A3Q8WY07 619 aa13.82□□□□□ -0.2
TRAPPC9-204ENST00000518723 PRKD2Q9BZL6 878 aa13.82□□□□□ -0.2
TRAPPC9-204ENST00000518723 FOXQ1Q9C009 403 aa13.82□□□□□ -0.2
TRAPPC9-204ENST00000518723 MINDY3Q9H8M7 445 aa13.82□□□□□ -0.2
TRAPPC9-204ENST00000518723 PIDD1Q9HB75 910 aa13.82□□□□□ -0.2
TRAPPC9-204ENST00000518723 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.82□□□□□ -0.2
TRAPPC9-204ENST00000518723 FNIP2Q9P278 1114 aa13.82□□□□□ -0.2
TRAPPC9-204ENST00000518723 NAP1L2Q9ULW6 460 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC9-204ENST00000518723 PPME1Q9Y570 386 aa13.82□□□□□ -0.2
TRAPPC9-204ENST00000518723 NUMBLQ9Y6R0 609 aa13.82□□□□□ -0.2
TRAPPC9-204ENST00000518723 CACNA1IQ9P0X4 2223 aa13.82□□□□□ -0.2
TRAPPC9-204ENST00000518723 SPTLC1O15269 473 aa13.81□□□□□ -0.2
TRAPPC9-204ENST00000518723 TGM5O43548 720 aa13.81□□□□□ -0.2
TRAPPC9-204ENST00000518723 GAS2O43903 313 aaKnown RBP13.81□□□□□ -0.2
TRAPPC9-204ENST00000518723 ITGA4P13612 1032 aa13.81□□□□□ -0.2
TRAPPC9-204ENST00000518723 OR1G1P47890 313 aa13.81□□□□□ -0.2
TRAPPC9-204ENST00000518723 AKAP17AQ02040 695 aaKnown RBP13.81□□□□□ -0.2
TRAPPC9-204ENST00000518723 PCBP1Q15365 356 aaKnown RBP eCLIP13.81□□□□□ -0.2
TRAPPC9-204ENST00000518723 NTRK3Q16288 839 aa13.81□□□□□ -0.2
TRAPPC9-204ENST00000518723 RSPO4Q2I0M5 234 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC9-204ENST00000518723 GET4Q7L5D6 327 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC9-204ENST00000518723 GPR161Q8N6U8 529 aaKnown RBP13.81□□□□□ -0.2
TRAPPC9-204ENST00000518723 SMG8Q8ND04 991 aaKnown RBP13.81□□□□□ -0.2
TRAPPC9-204ENST00000518723 ETNPPLQ8TBG4 499 aa13.81□□□□□ -0.2
TRAPPC9-204ENST00000518723 TBCKQ8TEA7 893 aa13.81□□□□□ -0.2
TRAPPC9-204ENST00000518723 PRPF31Q8WWY3 499 aaKnown RBP13.81□□□□□ -0.2
TRAPPC9-204ENST00000518723 PSPC1Q8WXF1 523 aaKnown RBP13.81□□□□□ -0.2
TRAPPC9-204ENST00000518723 PHKBQ93100 1093 aa13.81□□□□□ -0.2
TRAPPC9-204ENST00000518723 MBOAT7Q96N66 472 aa13.81□□□□□ -0.2
TRAPPC9-204ENST00000518723 DDX23Q9BUQ8 820 aaKnown RBP13.81□□□□□ -0.2
TRAPPC9-204ENST00000518723 RNF26Q9BY78 433 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC9-204ENST00000518723 C22orf23Q9BZE7 217 aa13.81□□□□□ -0.2
TRAPPC9-204ENST00000518723 DHX33Q9H6R0 707 aaKnown RBP13.81□□□□□ -0.2
TRAPPC9-204ENST00000518723 SH3GLB2Q9NR46 395 aa13.81□□□□□ -0.2
TRAPPC9-204ENST00000518723 FBXO4Q9UKT5 387 aa13.81□□□□□ -0.2
TRAPPC9-204ENST00000518723 ARL5CA6NH57 179 aa13.8□□□□□ -0.2
TRAPPC9-204ENST00000518723 NR1I2O75469 434 aa13.8□□□□□ -0.2
TRAPPC9-204ENST00000518723 SPATA31D3P0C874 917 aa13.8□□□□□ -0.2
TRAPPC9-204ENST00000518723 MYBP10242 640 aa13.8□□□□□ -0.2
TRAPPC9-204ENST00000518723 SDHBP21912 280 aa13.8□□□□□ -0.2
TRAPPC9-204ENST00000518723 CREMQ03060 361 aa13.8□□□□□ -0.2
TRAPPC9-204ENST00000518723 PLA2G4FQ68DD2 849 aa13.8□□□□□ -0.2
TRAPPC9-204ENST00000518723 MOXD1Q6UVY6 613 aa13.8□□□□□ -0.2
TRAPPC9-204ENST00000518723 SPATA31D4Q6ZUB0 917 aa13.8□□□□□ -0.2
TRAPPC9-204ENST00000518723 PALB2Q86YC2 1186 aa13.8□□□□□ -0.2
TRAPPC9-204ENST00000518723 CCDC51Q96ER9 411 aa13.8□□□□□ -0.2
TRAPPC9-204ENST00000518723 CNTNAP3BQ96NU0 1288 aa13.8□□□□□ -0.2
TRAPPC9-204ENST00000518723 CNTNAP3Q9BZ76 1288 aa13.8□□□□□ -0.2
TRAPPC9-204ENST00000518723 OSBPL6Q9BZF3 934 aa13.8□□□□□ -0.2
TRAPPC9-204ENST00000518723 VPS54Q9P1Q0 977 aa13.8□□□□□ -0.2
TRAPPC9-204ENST00000518723 IPPQ9Y573 584 aa13.8□□□□□ -0.2
TRAPPC9-204ENST00000518723 KANSL1LA0AUZ9 987 aa13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 F8W810 466 aa13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 ASAP2O43150 1006 aa13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 DKC1O60832 514 aaKnown RBP eCLIP13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 LRRN2O75325 713 aa13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 ZMYND10O75800 440 aa13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 TDP2O95551 362 aa13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 SRGAP2CP0DJJ0 459 aa13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 IFNAR1P17181 557 aa13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 AXLP30530 894 aa13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 MLH1P40692 756 aa13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 RFC5P40937 340 aa13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 MAGEA9P43362 315 aa13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 QARSP47897 775 aaKnown RBP13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 SCNN1GP51170 649 aa13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 NPEPPSP55786 919 aa13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 GPC5P78333 572 aa13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 FGD1P98174 961 aa13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 PRKCQQ04759 706 aa13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 LAMTOR4Q0VGL1 99 aa13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 USP41Q3LFD5 358 aa13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 VARS2Q5ST30 1063 aaKnown RBP13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 FBXL16Q8N461 479 aa13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 TMEM143Q96AN5 459 aa13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 GAD1Q99259 594 aa13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 COLEC11Q9BWP8 271 aa13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 BCO2Q9BYV7 579 aa13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 GPR62Q9BZJ7 368 aa13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 RNF39Q9H2S5 420 aa13.79□□□□□ -0.2
TRAPPC9-204ENST00000518723 PCDHGA2Q9Y5H1 932 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms