RNA–Protein interactions for RNA: ENST00000518699.3

NKX6-3-201, Transcript of NK6 homeobox 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX6-3, Length 1,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-201ENST00000518699 KCNJ6P48051 423 aa25.11■■□□□ 1.61
NKX6-3-201ENST00000518699 RAB27AP51159 221 aa25.11■■□□□ 1.61
NKX6-3-201ENST00000518699 SHHQ15465 462 aa25.11■■□□□ 1.61
NKX6-3-201ENST00000518699 UBXN11Q5T124 520 aa25.11■■□□□ 1.61
NKX6-3-201ENST00000518699 ZNF507Q8TCN5 953 aa25.11■■□□□ 1.61
NKX6-3-201ENST00000518699 SCFD1Q8WVM8 642 aa25.11■■□□□ 1.61
NKX6-3-201ENST00000518699 ACCSQ96QU6 501 aa25.11■■□□□ 1.61
NKX6-3-201ENST00000518699 GTPBP4Q9BZE4 634 aaKnown RBP25.11■■□□□ 1.61
NKX6-3-201ENST00000518699 TMEM206Q9H813 350 aa25.11■■□□□ 1.61
NKX6-3-201ENST00000518699 PTPRHQ9HD43 1115 aa25.11■■□□□ 1.61
NKX6-3-201ENST00000518699 CXXC1Q9P0U4 656 aaPredicted RBP25.11■■□□□ 1.61
NKX6-3-201ENST00000518699 KIAA1468Q9P260 1216 aa25.11■■□□□ 1.61
NKX6-3-201ENST00000518699 EXOC7Q9UPT5 735 aa25.11■■□□□ 1.61
NKX6-3-201ENST00000518699 USP20Q9Y2K6 914 aa25.11■■□□□ 1.61
NKX6-3-201ENST00000518699 ZMYM2Q9UBW7 1377 aa25.11■■□□□ 1.61
NKX6-3-201ENST00000518699 A0A0U1RQF3 1178 aa25.1■■□□□ 1.61
NKX6-3-201ENST00000518699 ZBBXA8MT70 800 aa25.1■■□□□ 1.61
NKX6-3-201ENST00000518699 ABLIM1O14639 778 aa25.1■■□□□ 1.61
NKX6-3-201ENST00000518699 TOM1L1O75674 476 aa25.1■■□□□ 1.61
NKX6-3-201ENST00000518699 AMHP03971 560 aa25.1■■□□□ 1.61
NKX6-3-201ENST00000518699 KCNA1Q09470 495 aa25.1■■□□□ 1.61
NKX6-3-201ENST00000518699 TMEM132AQ24JP5 1023 aa25.1■■□□□ 1.61
NKX6-3-201ENST00000518699 CHRDL2Q6WN34 429 aa25.1■■□□□ 1.61
NKX6-3-201ENST00000518699 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.1■■□□□ 1.61
NKX6-3-201ENST00000518699 RNPC3Q96LT9 517 aaKnown RBP25.1■■□□□ 1.61
NKX6-3-201ENST00000518699 SLC9A7Q96T83 725 aa25.1■■□□□ 1.61
NKX6-3-201ENST00000518699 FAM105AQ9NUU6 356 aa25.1■■□□□ 1.61
NKX6-3-201ENST00000518699 MAN1B1Q9UKM7 699 aa25.1■■□□□ 1.61
NKX6-3-201ENST00000518699 PRPF6O94906 941 aaKnown RBP25.09■■□□□ 1.61
NKX6-3-201ENST00000518699 SKIP12755 728 aa25.09■■□□□ 1.61
NKX6-3-201ENST00000518699 LIG4P49917 911 aa25.09■■□□□ 1.61
NKX6-3-201ENST00000518699 FAM189BP81408 668 aa25.09■■□□□ 1.61
NKX6-3-201ENST00000518699 DEFB103AP81534 67 aa25.09■■□□□ 1.61
NKX6-3-201ENST00000518699 KLHL40Q2TBA0 621 aa25.09■■□□□ 1.61
NKX6-3-201ENST00000518699 ZNF658Q5TYW1 1059 aaPredicted RBP25.09■■□□□ 1.61
NKX6-3-201ENST00000518699 EEF1DP3Q658K8 133 aa25.09■■□□□ 1.61
NKX6-3-201ENST00000518699 CRIPAKQ8N1N5 446 aa25.09■■□□□ 1.61
NKX6-3-201ENST00000518699 BICD1Q96G01 975 aa25.09■■□□□ 1.61
NKX6-3-201ENST00000518699 ADPGKQ9BRR6 497 aa25.09■■□□□ 1.61
NKX6-3-201ENST00000518699 ELAC1Q9H777 363 aaKnown RBP25.09■■□□□ 1.61
NKX6-3-201ENST00000518699 GDAQ9Y2T3 454 aa25.09■■□□□ 1.61
NKX6-3-201ENST00000518699 ZNF623O75123 536 aa25.08■■□□□ 1.61
NKX6-3-201ENST00000518699 HOXD13P35453 343 aa25.08■■□□□ 1.61
NKX6-3-201ENST00000518699 DCAF4L1Q3SXM0 396 aa25.08■■□□□ 1.61
NKX6-3-201ENST00000518699 COBLL1Q53SF7 1204 aa25.08■■□□□ 1.61
NKX6-3-201ENST00000518699 SLC39A4Q6P5W5 647 aa25.08■■□□□ 1.61
NKX6-3-201ENST00000518699 MPZL3Q6UWV2 235 aa25.08■■□□□ 1.61
NKX6-3-201ENST00000518699 RBM43Q6ZSC3 357 aaKnown RBP25.08■■□□□ 1.61
NKX6-3-201ENST00000518699 APBB1IPQ7Z5R6 666 aaPredicted RBP25.08■■□□□ 1.61
NKX6-3-201ENST00000518699 CDR2LQ86X02 465 aaPredicted RBP25.08■■□□□ 1.61
NKX6-3-201ENST00000518699 TDHQ8IZJ6 230 aa25.08■■□□□ 1.61
NKX6-3-201ENST00000518699 MYOCDQ8IZQ8 938 aa25.08■■□□□ 1.61
NKX6-3-201ENST00000518699 TRIML1Q8N9V2 468 aa25.08■■□□□ 1.61
NKX6-3-201ENST00000518699 RNF216Q9NWF9 866 aaPredicted RBP25.08■■□□□ 1.61
NKX6-3-201ENST00000518699 SLC4A7Q9Y6M7 1214 aa25.08■■□□□ 1.61
NKX6-3-201ENST00000518699 COL4A6Q14031 1691 aa25.08■■□□□ 1.61
NKX6-3-201ENST00000518699 GBF1Q92538 1859 aa25.08■■□□□ 1.6
NKX6-3-201ENST00000518699 ATF7P17544 494 aaPredicted RBP25.07■■□□□ 1.6
NKX6-3-201ENST00000518699 ZNF568Q3ZCX4 644 aa25.07■■□□□ 1.6
NKX6-3-201ENST00000518699 CCDC183Q5T5S1 534 aa25.07■■□□□ 1.6
NKX6-3-201ENST00000518699 ZNF598Q86UK7 904 aaKnown RBP25.07■■□□□ 1.6
NKX6-3-201ENST00000518699 ECHDC2Q86YB7 292 aa25.07■■□□□ 1.6
NKX6-3-201ENST00000518699 NPAS4Q8IUM7 802 aa25.07■■□□□ 1.6
NKX6-3-201ENST00000518699 PHOSPHO2Q8TCD6 241 aa25.07■■□□□ 1.6
NKX6-3-201ENST00000518699 EIF2AQ9BY44 585 aaKnown RBP25.07■■□□□ 1.6
NKX6-3-201ENST00000518699 CDT1Q9H211 546 aa25.07■■□□□ 1.6
NKX6-3-201ENST00000518699 TMEM161AQ9NX61 479 aa25.07■■□□□ 1.6
NKX6-3-201ENST00000518699 PCDHB2Q9Y5E7 798 aa25.07■■□□□ 1.6
NKX6-3-201ENST00000518699 STYXL1Q9Y6J8 313 aa25.07■■□□□ 1.6
NKX6-3-201ENST00000518699 A0A1W2PPC1 479 aa25.06■■□□□ 1.6
NKX6-3-201ENST00000518699 KIF20AO95235 890 aa25.06■■□□□ 1.6
NKX6-3-201ENST00000518699 NPTXRO95502 500 aa25.06■■□□□ 1.6
NKX6-3-201ENST00000518699 MCL1Q07820 350 aa25.06■■□□□ 1.6
NKX6-3-201ENST00000518699 MORC3Q14149 939 aa25.06■■□□□ 1.6
NKX6-3-201ENST00000518699 NOLC1Q14978 699 aaKnown RBP eCLIP25.06■■□□□ 1.6
NKX6-3-201ENST00000518699 RALGAPA2Q2PPJ7 1873 aa25.06■■□□□ 1.6
NKX6-3-201ENST00000518699 GUF1Q8N442 669 aaKnown RBP25.06■■□□□ 1.6
NKX6-3-201ENST00000518699 TOP1MTQ969P6 601 aa25.06■■□□□ 1.6
NKX6-3-201ENST00000518699 TRIM6Q9C030 488 aaPredicted RBP25.06■■□□□ 1.6
NKX6-3-201ENST00000518699 ANKFY1Q9P2R3 1169 aa25.06■■□□□ 1.6
NKX6-3-201ENST00000518699 FNDC1Q4ZHG4 1894 aaPredicted RBP25.06■■□□□ 1.6
NKX6-3-201ENST00000518699 MCF2P10911 925 aa25.05■■□□□ 1.6
NKX6-3-201ENST00000518699 MRPL10Q7Z7H8 261 aaKnown RBP25.05■■□□□ 1.6
NKX6-3-201ENST00000518699 SYCP3Q8IZU3 236 aa25.05■■□□□ 1.6
NKX6-3-201ENST00000518699 SMG8Q8ND04 991 aaKnown RBP25.05■■□□□ 1.6
NKX6-3-201ENST00000518699 GBP3Q9H0R5 595 aa25.05■■□□□ 1.6
NKX6-3-201ENST00000518699 TMEM63CQ9P1W3 806 aa25.05■■□□□ 1.6
NKX6-3-201ENST00000518699 IPPQ9Y573 584 aa25.05■■□□□ 1.6
NKX6-3-201ENST00000518699 CLDN3O15551 220 aa25.05■■□□□ 1.6
NKX6-3-201ENST00000518699 EOMESO95936 686 aa25.05■■□□□ 1.6
NKX6-3-201ENST00000518699 STAG3L1P0CL83 205 aa25.05■■□□□ 1.6
NKX6-3-201ENST00000518699 SNRPFP62306 86 aaKnown RBP25.05■■□□□ 1.6
NKX6-3-201ENST00000518699 NFKBIBQ15653 356 aa25.05■■□□□ 1.6
NKX6-3-201ENST00000518699 KNOP1Q1ED39 458 aaKnown RBP25.05■■□□□ 1.6
NKX6-3-201ENST00000518699 SLFN12LQ6IEE8 588 aa25.05■■□□□ 1.6
NKX6-3-201ENST00000518699 SMYD4Q8IYR2 804 aaPredicted RBP25.05■■□□□ 1.6
NKX6-3-201ENST00000518699 SYAP1Q96A49 352 aaPredicted RBP25.05■■□□□ 1.6
NKX6-3-201ENST00000518699 IKZF4Q9H2S9 585 aa25.05■■□□□ 1.6
NKX6-3-201ENST00000518699 TISP43B9A030 160 aa25.04■■□□□ 1.6
NKX6-3-201ENST00000518699 ANKRD63C9JTQ0 380 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms