RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 RPLP2P05387 115 aaKnown RBP5.86□□□□□ -1.47
SQLE-202ENST00000518604 POU2F2P09086 479 aa5.86□□□□□ -1.47
SQLE-202ENST00000518604 GYPEP15421 78 aa5.86□□□□□ -1.47
SQLE-202ENST00000518604 HSPA6P17066 643 aa5.86□□□□□ -1.47
SQLE-202ENST00000518604 BMP7P18075 431 aa5.86□□□□□ -1.47
SQLE-202ENST00000518604 ECHS1P30084 290 aa5.86□□□□□ -1.47
SQLE-202ENST00000518604 CRHR1P34998 444 aa5.86□□□□□ -1.47
SQLE-202ENST00000518604 EPHB4P54760 987 aa5.86□□□□□ -1.47
SQLE-202ENST00000518604 MST1LQ2TV78 715 aa5.86□□□□□ -1.47
SQLE-202ENST00000518604 MINDY4Q4G0A6 757 aa5.86□□□□□ -1.47
SQLE-202ENST00000518604 KRT40Q6A162 431 aa5.86□□□□□ -1.47
SQLE-202ENST00000518604 PPP4R3AQ6IN85 833 aa5.86□□□□□ -1.47
SQLE-202ENST00000518604 ABHD15Q6UXT9 468 aa5.86□□□□□ -1.47
SQLE-202ENST00000518604 FRMD5Q7Z6J6 570 aa5.86□□□□□ -1.47
SQLE-202ENST00000518604 MAGEB6Q8N7X4 407 aa5.86□□□□□ -1.47
SQLE-202ENST00000518604 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.86□□□□□ -1.475e-6■■□□□ 11.5
SQLE-202ENST00000518604 ZNF480Q8WV37 535 aa5.86□□□□□ -1.47
SQLE-202ENST00000518604 CYFIP2Q96F07 1278 aa5.86□□□□□ -1.47
SQLE-202ENST00000518604 C7orf25Q9BPX7 421 aa5.86□□□□□ -1.47
SQLE-202ENST00000518604 BCO1Q9HAY6 547 aa5.86□□□□□ -1.47
SQLE-202ENST00000518604 INTUQ9ULD6 942 aa5.86□□□□□ -1.47
SQLE-202ENST00000518604 IPPQ9Y573 584 aa5.86□□□□□ -1.47
SQLE-202ENST00000518604 HTRA2O43464 458 aaPredicted RBP5.85□□□□□ -1.47
SQLE-202ENST00000518604 LAMTOR5O43504 91 aa5.85□□□□□ -1.47
SQLE-202ENST00000518604 DTNBO60941 627 aa5.85□□□□□ -1.47
SQLE-202ENST00000518604 PDCP20941 246 aa5.85□□□□□ -1.47
SQLE-202ENST00000518604 ADAM8P78325 824 aa5.85□□□□□ -1.47
SQLE-202ENST00000518604 MLC1Q15049 377 aa5.85□□□□□ -1.47
SQLE-202ENST00000518604 NOMO1Q15155 1222 aa5.85□□□□□ -1.47
SQLE-202ENST00000518604 UAP1L1Q3KQV9 507 aa5.85□□□□□ -1.47
SQLE-202ENST00000518604 ZFYVE27Q5T4F4 411 aa5.85□□□□□ -1.47
SQLE-202ENST00000518604 MIGA2Q7L4E1 593 aa5.85□□□□□ -1.47
SQLE-202ENST00000518604 TPH2Q8IWU9 490 aa5.85□□□□□ -1.47
SQLE-202ENST00000518604 CMTM4Q8IZR5 234 aa5.85□□□□□ -1.47
SQLE-202ENST00000518604 PRR18Q8N4B5 295 aa5.85□□□□□ -1.47
SQLE-202ENST00000518604 MSL3Q8N5Y2 521 aaKnown RBP5.85□□□□□ -1.47
SQLE-202ENST00000518604 ANKRD53Q8N9V6 530 aa5.85□□□□□ -1.47
SQLE-202ENST00000518604 OR7D4Q8NG98 312 aa5.85□□□□□ -1.47
SQLE-202ENST00000518604 OR14K1Q8NGZ2 314 aa5.85□□□□□ -1.47
SQLE-202ENST00000518604 CFHR4Q92496 578 aa5.85□□□□□ -1.47
SQLE-202ENST00000518604 HOXB13Q92826 284 aaPredicted RBP5.85□□□□□ -1.47
SQLE-202ENST00000518604 TSR2Q969E8 191 aaKnown RBP5.85□□□□□ -1.47
SQLE-202ENST00000518604 NEIL1Q96FI4 390 aaPredicted RBP5.85□□□□□ -1.47
SQLE-202ENST00000518604 CCDC136Q96JN2 1154 aa5.85□□□□□ -1.47
SQLE-202ENST00000518604 NELFAQ9H3P2 528 aa5.85□□□□□ -1.47
SQLE-202ENST00000518604 MANSC1Q9H8J5 431 aa5.85□□□□□ -1.47
SQLE-202ENST00000518604 NMRK2Q9NPI5 230 aa5.85□□□□□ -1.47
SQLE-202ENST00000518604 ING3Q9NXR8 418 aa5.85□□□□□ -1.47
SQLE-202ENST00000518604 CFAP20Q9Y6A4 193 aaKnown RBP5.85□□□□□ -1.47
SQLE-202ENST00000518604 CCDC154A6NI56 674 aa5.84□□□□□ -1.47
SQLE-202ENST00000518604 KIF3BO15066 747 aa5.84□□□□□ -1.47
SQLE-202ENST00000518604 SGTAO43765 313 aa5.84□□□□□ -1.47
SQLE-202ENST00000518604 OFD1O75665 1012 aa5.84□□□□□ -1.47
SQLE-202ENST00000518604 LPOP22079 712 aaPredicted RBP5.84□□□□□ -1.47
SQLE-202ENST00000518604 DUSP2Q05923 314 aa5.84□□□□□ -1.47
SQLE-202ENST00000518604 GFOD2Q3B7J2 385 aa5.84□□□□□ -1.47
SQLE-202ENST00000518604 ATAT1Q5SQI0 421 aa5.84□□□□□ -1.47
SQLE-202ENST00000518604 SLFN13Q68D06 897 aa5.84□□□□□ -1.47
SQLE-202ENST00000518604 LCNL1Q6ZST4 164 aa5.84□□□□□ -1.47
SQLE-202ENST00000518604 USP45Q70EL2 814 aa5.84□□□□□ -1.47
SQLE-202ENST00000518604 PDZD4Q76G19 769 aaPredicted RBP5.84□□□□□ -1.47
SQLE-202ENST00000518604 SYT8Q8NBV8 401 aa5.84□□□□□ -1.47
SQLE-202ENST00000518604 CLIP3Q96DZ5 547 aa5.84□□□□□ -1.47
SQLE-202ENST00000518604 DMRT3Q9NQL9 472 aa5.84□□□□□ -1.47
SQLE-202ENST00000518604 TLR9Q9NR96 1032 aa5.84□□□□□ -1.47
SQLE-202ENST00000518604 GPRC5DQ9NZD1 345 aa5.84□□□□□ -1.47
SQLE-202ENST00000518604 SERPINB13Q9UIV8 391 aa5.84□□□□□ -1.47
SQLE-202ENST00000518604 OAZ3Q9UMX2 235 aa5.84□□□□□ -1.47
SQLE-202ENST00000518604 LIMCH1Q9UPQ0 1083 aa5.84□□□□□ -1.47
SQLE-202ENST00000518604 MATN2O00339 956 aa5.83□□□□□ -1.48
SQLE-202ENST00000518604 ERC2O15083 957 aa5.83□□□□□ -1.48
SQLE-202ENST00000518604 CR2P20023 1033 aa5.83□□□□□ -1.48
SQLE-202ENST00000518604 EDNRBP24530 442 aa5.83□□□□□ -1.48
SQLE-202ENST00000518604 ADSLP30566 484 aaPredicted RBP5.83□□□□□ -1.48
SQLE-202ENST00000518604 RPS19P39019 145 aaKnown RBP5.83□□□□□ -1.48
SQLE-202ENST00000518604 PER3P56645 1201 aa5.83□□□□□ -1.48
SQLE-202ENST00000518604 HLTFQ14527 1009 aaKnown RBP eCLIP5.83□□□□□ -1.48
SQLE-202ENST00000518604 IFIT1BQ5T764 474 aaKnown RBP5.83□□□□□ -1.48
SQLE-202ENST00000518604 Q6ZVL8 140 aa5.83□□□□□ -1.48
SQLE-202ENST00000518604 EPM2AIP1Q7L775 607 aaPredicted RBP5.83□□□□□ -1.48
SQLE-202ENST00000518604 WDR75Q8IWA0 830 aaKnown RBP5.83□□□□□ -1.48
SQLE-202ENST00000518604 SHCBP1Q8NEM2 672 aa5.83□□□□□ -1.48
SQLE-202ENST00000518604 HPS3Q969F9 1004 aa5.83□□□□□ -1.48
SQLE-202ENST00000518604 RPL10LQ96L21 214 aaKnown RBP5.83□□□□□ -1.48
SQLE-202ENST00000518604 LMF1Q96S06 567 aa5.83□□□□□ -1.48
SQLE-202ENST00000518604 GPHA2Q96T91 129 aa5.83□□□□□ -1.48
SQLE-202ENST00000518604 SLC12A5Q9H2X9 1139 aa5.83□□□□□ -1.48
SQLE-202ENST00000518604 ZCCHC4Q9H5U6 513 aa5.83□□□□□ -1.48
SQLE-202ENST00000518604 PARD6AQ9NPB6 346 aa5.83□□□□□ -1.48
SQLE-202ENST00000518604 TRPS1Q9UHF7 1281 aa5.83□□□□□ -1.48
SQLE-202ENST00000518604 RCAN3Q9UKA8 241 aa5.83□□□□□ -1.48
SQLE-202ENST00000518604 NOB1Q9ULX3 412 aaKnown RBP5.83□□□□□ -1.48
SQLE-202ENST00000518604 NPEPPSP55786 919 aa5.82□□□□□ -1.48
SQLE-202ENST00000518604 RIN1Q13671 783 aa5.82□□□□□ -1.48
SQLE-202ENST00000518604 SEPT2Q15019 361 aa5.82□□□□□ -1.48
SQLE-202ENST00000518604 THEMIS2Q5TEJ8 643 aa5.82□□□□□ -1.48
SQLE-202ENST00000518604 LILRA6Q6PI73 481 aa5.82□□□□□ -1.48
SQLE-202ENST00000518604 ADGRE4PQ86SQ3 457 aa5.82□□□□□ -1.48
SQLE-202ENST00000518604 TTC7BQ86TV6 843 aa5.82□□□□□ -1.48
SQLE-202ENST00000518604 TTC8Q8TAM2 541 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms