RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 TIPINQ9BVW5 301 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 NSRP1Q9H0G5 558 aaKnown RBP5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 CARD9Q9H257 536 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 PRDM7Q9NQW5 492 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 HAUS2Q9NVX0 235 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 FKBP14Q9NWM8 211 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 HYPKQ9NX55 129 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 HESX1Q9UBX0 185 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 CYP8B1Q9UNU6 501 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 ZNF652Q9Y2D9 606 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 C9orf84Q5VXU9 1444 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 TTC21AQ8NDW8 1320 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 ADGRL1O94910 1474 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 CDK13Q14004 1512 aaKnown RBP5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 SMIM31A0A1B0GVY4 71 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 GOLGA8TH3BQL2 631 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 IFIT3O14879 490 aaKnown RBP5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 GFPT2O94808 682 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 RHOXF2BP0C7M4 288 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 GOLGA8HP0CJ92 632 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 HSPA1AP0DMV8 641 aaKnown RBP5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 HSPA1BP0DMV9 641 aaKnown RBP5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 NAT2P11245 290 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 TRIM27P14373 513 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 EIF2S2P20042 333 aaKnown RBP5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 NR1D1P20393 614 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 IBSPP21815 317 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 TNFRSF8P28908 595 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 LIFRP42702 1097 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 GUCY2FP51841 1108 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 VAV2P52735 878 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 ADARP55265 1226 aaKnown RBP5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 UBASH3AP57075 661 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 GEMIN4P57678 1058 aaKnown RBP5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 GUCY1B3Q02153 619 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 RING1Q06587 406 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 MESP2Q0VG99 397 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 PAK2Q13177 524 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 RASGRF1Q13972 1273 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 TAF1CQ15572 869 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 ACCSLQ4AC99 568 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 PPM1JQ5JR12 505 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 KAZNQ674X7 775 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 CCSAPQ6IQ19 270 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 TMEM53Q6P2H8 277 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 TUBA3EQ6PEY2 450 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 SPOCD1Q6ZMY3 1216 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 UNC13DQ70J99 1090 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 CPLX4Q7Z7G2 160 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 PNMA8AQ86V59 439 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 C12orf40Q86WS4 652 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 DHX40Q8IX18 779 aaKnown RBP5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 SPACA3Q8IXA5 215 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 KIRREL3Q8IZU9 778 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 LSMEM2Q8N112 164 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 CNBD1Q8NA66 436 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 SLC43A3Q8NBI5 491 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 CCDC197Q8NCU1 140 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 PPFIBP2Q8ND30 876 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 FBXO41Q8TF61 875 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 APPBP2Q92624 585 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 ELMO3Q96BJ8 720 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 ANKRD36BP1Q96IX9 119 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 SEC16BQ96JE7 1060 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 ZNF570Q96NI8 536 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 HAPLN3Q96S86 360 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 PNKPQ96T60 521 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 SEC62Q99442 399 aaKnown RBP5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 RHOXF2Q9BQY4 288 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 XPO4Q9C0E2 1151 aaKnown RBP5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 NDST4Q9H3R1 872 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 IFT122Q9HBG6 1241 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 AS3MTQ9HBK9 375 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 ZNF304Q9HCX3 659 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 RRP7BPQ9NSQ0 103 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 BTBD7Q9P203 1132 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 LRCH1Q9Y2L9 728 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 L3MBTL1Q9Y468 752 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 PCDHB5Q9Y5E4 795 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 SNX11Q9Y5W9 270 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 KDM6AO15550 1401 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 CDC42BPAQ5VT25 1732 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 FGD5Q6ZNL6 1462 aa5.19□□□□□ -1.58
HMGB1P19-201ENST00000517578 SETD1BQ9UPS6 1966 aaKnown RBP5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 LAMC3Q9Y6N6 1575 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 NUP160Q12769 1436 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 A0A1B0GVL5 298 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 VPS37CA5D8V6 355 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 F6X3S4 739 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 IGF2BP3O00425 579 aaKnown RBP eCLIP5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 FYB1O15117 783 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 ASAP2O43150 1006 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 DIAPH1O60610 1272 aaKnown RBP5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 TSPAN1O60635 241 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 ZC3H11AO75152 810 aaKnown RBP eCLIP5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 SUPT3HO75486 399 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 FGFR1OPO95684 399 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms