RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 MCF2P10911 925 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 ARF4P18085 180 aaPredicted RBP5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 SARSP49591 514 aaKnown RBP5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 SNRPFP62306 86 aaKnown RBP5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 GTF2BQ00403 316 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 RNASELQ05823 741 aaKnown RBP5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 FAM187BQ17R55 369 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 KNOP1Q1ED39 458 aaKnown RBP5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 ZC2HC1CQ53FD0 456 aaPredicted RBP5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 KLHL10Q6JEL2 608 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 FAM117BQ6P1L5 589 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 GLB1LQ6UWU2 654 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 MPZL3Q6UWV2 235 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 USP37Q86T82 979 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 NPAS4Q8IUM7 802 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 CREBRFQ8IUR6 639 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 MAP4K3Q8IVH8 894 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 THNSL1Q8IYQ7 743 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 GUF1Q8N442 669 aaKnown RBP5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 MLKLQ8NB16 471 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 GPT2Q8TD30 523 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 LRRC15Q8TF66 581 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 ERCC4Q92889 916 aaPredicted RBP5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 HPS3Q969F9 1004 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 FAM212AQ96EL1 285 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 DHTKD1Q96HY7 919 aaPredicted RBP5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 FAM193BQ96PV7 902 aaPredicted RBP5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 CTAGE1Q96RT6 745 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 SLC9A7Q96T83 725 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 YME1L1Q96TA2 773 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 ACO2Q99798 780 aaKnown RBP5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 APOL6Q9BWW8 343 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 AGO3Q9H9G7 860 aaKnown RBP5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 KIAA1586Q9HCI6 787 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 RGS18Q9NS28 235 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 AGPAT5Q9NUQ2 364 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 ARHGAP28Q9P2N2 729 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 MSRAQ9UJ68 235 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 MAN1B1Q9UKM7 699 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 MAPK8IP1Q9UQF2 711 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 TNFSF13BQ9Y275 285 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 FRMD4BQ9Y2L6 1034 aa5.96□□□□□ -1.46
SCARNA16.4-201ENST00000516956 TCHHQ07283 1943 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 ARID2Q68CP9 1835 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 A0A1B0GUA9 196 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 ZNF233A6NK53 670 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 BECN2A8MW95 431 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 PDXKO00764 312 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 ENPP3O14638 875 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 CETN3O15182 167 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 OGTO15294 1046 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 B4GALT5O43286 388 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 XPOTO43592 962 aaKnown RBP5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 KLRC4O43908 158 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 KRT13P13646 458 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 ATP2A2P16615 1042 aaKnown RBP5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 GARTP22102 1010 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 ITGB8P26012 769 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 CYP2J2P51589 502 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 NLRP12P59046 1061 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 OSTNP61366 133 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 PPP2R3AQ06190 1150 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 STK4Q13043 487 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 MBTPS1Q14703 1052 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 NOLC1Q14978 699 aaKnown RBP eCLIP5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 SURF1Q15526 300 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 STX1AQ16623 288 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 TMEM240Q5SV17 173 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 CHRDL2Q6WN34 429 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 CDR2LQ86X02 465 aaPredicted RBP5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 ECHDC2Q86YB7 292 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 ANKRD20A12PQ8NF67 263 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 PHOSPHO2Q8TCD6 241 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 ZNF507Q8TCN5 953 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 TMEM40Q8WWA1 233 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 RSPH1Q8WYR4 309 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 HERVK_113Q902F9 699 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 ACAP3Q96P50 834 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 MRPL9Q9BYD2 267 aaKnown RBP5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 CCDC113Q9H0I3 377 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 TSPYL2Q9H2G4 693 aaPredicted RBP5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 PCIF1Q9H4Z3 704 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 PDZD7Q9H5P4 517 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 MINDY3Q9H8M7 445 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 RPF1Q9H9Y2 349 aaKnown RBP5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 AAASQ9NRG9 546 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 FAM105AQ9NUU6 356 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 TYW1Q9NV66 732 aaKnown RBP5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 TMEM161AQ9NX61 479 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 KANSL3Q9P2N6 904 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 MAGEC2Q9UBF1 373 aaPredicted RBP5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 AGO2Q9UKV8 859 aaKnown RBP5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 INPP5FQ9Y2H2 1132 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 GDAQ9Y2T3 454 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 PCDHB2Q9Y5E7 798 aa5.95□□□□□ -1.46
SCARNA16.4-201ENST00000516956 A0A0U1RQF3 1178 aa5.94□□□□□ -1.46
SCARNA16.4-201ENST00000516956 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.94□□□□□ -1.46
SCARNA16.4-201ENST00000516956 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.94□□□□□ -1.46
SCARNA16.4-201ENST00000516956 CARNS1A5YM72 827 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms