RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 CHAMP1Q96JM3 812 aa0.25□□□□□ -2.37
RNU6-539P-201ENST00000516665 TRAF4Q9BUZ4 470 aaPredicted RBP0.25□□□□□ -2.37
RNU6-539P-201ENST00000516665 RBCK1Q9BYM8 510 aa0.25□□□□□ -2.37
RNU6-539P-201ENST00000516665 CDCP1Q9H5V8 836 aa0.25□□□□□ -2.37
RNU6-539P-201ENST00000516665 EHMT1Q9H9B1 1298 aa0.25□□□□□ -2.37
RNU6-539P-201ENST00000516665 INCENPQ9NQS7 918 aa0.25□□□□□ -2.37
RNU6-539P-201ENST00000516665 SLC7A10Q9NS82 523 aa0.25□□□□□ -2.37
RNU6-539P-201ENST00000516665 GALNT8Q9NY28 637 aa0.25□□□□□ -2.37
RNU6-539P-201ENST00000516665 WHRNQ9P202 907 aa0.25□□□□□ -2.37
RNU6-539P-201ENST00000516665 VWA7Q9Y334 891 aa0.25□□□□□ -2.37
RNU6-539P-201ENST00000516665 FPGT-TNNI3KV9GXZ4 949 aa0.25□□□□□ -2.37
RNU6-539P-201ENST00000516665 PRR23AA6NEV1 266 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 SRRM3A6NNA2 597 aaPredicted RBP0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 TISP43B9A030 160 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 E5RJQ4 531 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 ACOT8O14734 319 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 TOX4O94842 621 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 MPIG6BO95866 241 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 CFIP05156 583 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 PSG1P11464 419 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 GAS1P54826 345 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 CLCQ05315 142 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 FAM160A1Q05DH4 1040 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 LSAMPQ13449 338 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 BFSP2Q13515 415 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 KCNC3Q14003 757 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 TCEAL1Q15170 157 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 RBMS2Q15434 407 aaKnown RBP0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 ZNF618Q5T7W0 954 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 ADAM5Q6NVV9 412 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 KLHDC10Q6PID8 442 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 TMC7Q7Z402 723 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 KRT77Q7Z794 578 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 AARSD1Q9BTE6 412 aaKnown RBP0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 JAM3Q9BX67 310 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 BTBD2Q9BX70 525 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 AMNQ9BXJ7 453 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 KLHL25Q9H0H3 589 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 ACSS2Q9NR19 701 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 TBCCD1Q9NVR7 557 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 ARHGAP28Q9P2N2 729 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 WWC3Q9ULE0 1092 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 PADI4Q9UM07 663 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 PCDHB1Q9Y5F3 818 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 PCDHA2Q9Y5H9 948 aa0.24□□□□□ -2.37
RNU6-539P-201ENST00000516665 B4DGG1 531 aa0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 DIRC3C9JPN6 131 aa0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 HOXA3O43365 443 aaPredicted RBP0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 PAK4O96013 591 aaPredicted RBP0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 ELANEP08246 267 aa0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 DNAH10OSP0CZ25 163 aa0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 VSIG10L2P0DP72 767 aa0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 GARTP22102 1010 aa0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 PTGS1P23219 599 aa0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 EPHA5P54756 1037 aa0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 PROSER3Q2NL68 480 aa0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 C14orf177Q52M58 125 aa0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 ZDHHC20Q5W0Z9 365 aa0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 METRNLQ641Q3 311 aa0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 KRT40Q6A162 431 aa0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 GLB1L3Q8NCI6 653 aaPredicted RBP0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 C16orf52Q8NHV5 167 aa0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 UHMK1Q8TAS1 419 aaKnown RBP0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 SLC7A14Q8TBB6 771 aa0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 PIGOQ8TEQ8 1089 aa0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 DIO2Q92813 273 aa0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 COQ8BQ96D53 544 aa0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 NEU1Q99519 415 aa0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 PDCD2LQ9BRP1 358 aa0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 PYGO2Q9BRQ0 406 aa0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 FAM234AQ9H0X4 552 aa0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 MLXIPQ9HAP2 919 aa0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 PDGFCQ9NRA1 345 aa0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 KCTD5Q9NXV2 234 aa0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 SELENONQ9NZV5 590 aa0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 EFR3BQ9Y2G0 817 aa0.23□□□□□ -2.37
RNU6-539P-201ENST00000516665 SYT5O00445 386 aa0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 NKRFO15226 690 aaKnown RBP eCLIP0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 DNAJC6O75061 913 aa0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 SPATA31D3P0C874 917 aa0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 RLBP1P12271 317 aa0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 CD19P15391 556 aa0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 CRKP46108 304 aa0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 LMO4P61968 165 aa0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 ZYXQ15942 572 aaKnown RBP0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 FAM76BQ5HYJ3 339 aa0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 FAM102AQ5T9C2 384 aaPredicted RBP0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 MEI1Q5TIA1 1274 aa0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 B3GNTL1Q67FW5 361 aaPredicted RBP0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 KIAA0895LQ68EN5 471 aa0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 IQCEQ6IPM2 695 aa0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 FAM196AQ6ZSG2 479 aa0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 SPATA31D4Q6ZUB0 917 aa0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 OTOP3Q7RTS5 596 aa0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 PROSER2Q86WR7 435 aaPredicted RBP0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 RASAL3Q86YV0 1011 aa0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 KRTAP7-1Q8IUC3 87 aa0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 CMTM4Q8IZR5 234 aa0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 GOLM1Q8NBJ4 401 aa0.22□□□□□ -2.37
RNU6-539P-201ENST00000516665 FGD4Q96M96 766 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms