RNA–Protein interactions for RNA: ENST00000515160.5

CAST-243, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-243ENST00000515160 FXR1P51114 621 aaKnown RBP eCLIP6.9□□□□□ -1.3
CAST-243ENST00000515160 ALDH6A1Q02252 535 aaKnown RBP6.9□□□□□ -1.3
CAST-243ENST00000515160 DUSP4Q13115 394 aa6.9□□□□□ -1.3
CAST-243ENST00000515160 TUSC3Q13454 348 aa6.9□□□□□ -1.3
CAST-243ENST00000515160 MUM1Q2TAK8 710 aa6.9□□□□□ -1.3
CAST-243ENST00000515160 PGS1Q32NB8 556 aa6.9□□□□□ -1.3
CAST-243ENST00000515160 SLCO6A1Q86UG4 719 aa6.9□□□□□ -1.3
CAST-243ENST00000515160 RBM12BQ8IXT5 1001 aaKnown RBP6.9□□□□□ -1.3
CAST-243ENST00000515160 CPXCR1Q8N123 301 aa6.9□□□□□ -1.3
CAST-243ENST00000515160 PRR18Q8N4B5 295 aa6.9□□□□□ -1.3
CAST-243ENST00000515160 PAF1Q8N7H5 531 aa6.9□□□□□ -1.3
CAST-243ENST00000515160 PHOSPHO1Q8TCT1 267 aa6.9□□□□□ -1.3
CAST-243ENST00000515160 NETO1Q8TDF5 533 aa6.9□□□□□ -1.3
CAST-243ENST00000515160 PGBD4Q96DM1 585 aa6.9□□□□□ -1.3
CAST-243ENST00000515160 HHIPL1Q96JK4 782 aa6.9□□□□□ -1.3
CAST-243ENST00000515160 CCDC138Q96M89 665 aa6.9□□□□□ -1.3
CAST-243ENST00000515160 PCDHGB6Q9Y5F9 930 aa6.9□□□□□ -1.3
CAST-243ENST00000515160 SSH2Q76I76 1423 aa6.9□□□□□ -1.31
CAST-243ENST00000515160 YTHDC2Q9H6S0 1430 aaKnown RBP6.9□□□□□ -1.31
CAST-243ENST00000515160 F5H423 210 aaPredicted RBP6.89□□□□□ -1.31
CAST-243ENST00000515160 ELL2O00472 640 aaPredicted RBP6.89□□□□□ -1.31
CAST-243ENST00000515160 B3GALT2O43825 422 aa6.89□□□□□ -1.31
CAST-243ENST00000515160 APOL3O95236 402 aa6.89□□□□□ -1.31
CAST-243ENST00000515160 NTRK1P04629 796 aa6.89□□□□□ -1.31
CAST-243ENST00000515160 CACNB3P54284 484 aa6.89□□□□□ -1.31
CAST-243ENST00000515160 IFIT5Q13325 482 aaKnown RBP6.89□□□□□ -1.31
CAST-243ENST00000515160 SEMA5AQ13591 1074 aa6.89□□□□□ -1.31
CAST-243ENST00000515160 SLC9A5Q14940 896 aa6.89□□□□□ -1.31
CAST-243ENST00000515160 TTC38Q5R3I4 469 aa6.89□□□□□ -1.31
CAST-243ENST00000515160 SKAP1Q86WV1 359 aa6.89□□□□□ -1.31
CAST-243ENST00000515160 TRIM48Q8IWZ4 208 aa6.89□□□□□ -1.31
CAST-243ENST00000515160 PLD6Q8N2A8 252 aaKnown RBP6.89□□□□□ -1.31
CAST-243ENST00000515160 ERCC4Q92889 916 aaPredicted RBP6.89□□□□□ -1.31
CAST-243ENST00000515160 TUBGCP5Q96RT8 1024 aa6.89□□□□□ -1.31
CAST-243ENST00000515160 SELENOOQ9BVL4 669 aa6.89□□□□□ -1.31
CAST-243ENST00000515160 IFT122Q9HBG6 1241 aa6.89□□□□□ -1.31
CAST-243ENST00000515160 CASS4Q9NQ75 786 aa6.89□□□□□ -1.31
CAST-243ENST00000515160 TERF2IPQ9NYB0 399 aa6.89□□□□□ -1.31
CAST-243ENST00000515160 DPP7Q9UHL4 492 aa6.89□□□□□ -1.31
CAST-243ENST00000515160 TELO2Q9Y4R8 837 aa6.89□□□□□ -1.31
CAST-243ENST00000515160 ATP7BP35670 1465 aa6.89□□□□□ -1.31
CAST-243ENST00000515160 LRRC37A3O60309 1634 aa6.89□□□□□ -1.31
CAST-243ENST00000515160 PCNTO95613 3336 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 PIK3C2GO75747 1445 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 ANKARQ7Z5J8 1434 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 ST20-MTHFSA0A0A6YYL1 179 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 GOLIM4O00461 696 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 NBNO60934 754 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 TADA3O75528 432 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 CD53P19397 219 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 KIR2DL1P43626 348 aaPredicted RBP6.88□□□□□ -1.31
CAST-243ENST00000515160 KIR2DL2P43627 348 aaPredicted RBP6.88□□□□□ -1.31
CAST-243ENST00000515160 TM4SF4P48230 202 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 RTP1P59025 263 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 HSF5Q4G112 596 aaPredicted RBP6.88□□□□□ -1.31
CAST-243ENST00000515160 ZBTB41Q5SVQ8 909 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 CABP7Q86V35 215 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 MYLK4Q86YV6 388 aaPredicted RBP6.88□□□□□ -1.31
CAST-243ENST00000515160 KIAA0319LQ8IZA0 1049 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 DNAJC5GQ8N7S2 189 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 ASIC4Q96FT7 647 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 SGCZQ96LD1 299 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 GBP4Q96PP9 640 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 TBCBQ99426 244 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 DBNDD2Q9BQY9 259 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 G6PC3Q9BUM1 346 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 B3GNT5Q9BYG0 378 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 KCTD10Q9H3F6 313 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 LUZP4Q9P127 313 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 MYOTQ9UBF9 498 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 ASH2LQ9UBL3 628 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 ZC3H7BQ9UGR2 993 aaKnown RBP6.88□□□□□ -1.31
CAST-243ENST00000515160 ANAPC4Q9UJX5 808 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 L1RE1Q9UN81 338 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 NUMBLQ9Y6R0 609 aa6.88□□□□□ -1.31
CAST-243ENST00000515160 ARID1BQ8NFD5 2236 aaPredicted RBP6.88□□□□□ -1.31
CAST-243ENST00000515160 SPATA31E1Q6ZUB1 1445 aa6.87□□□□□ -1.31
CAST-243ENST00000515160 PRPF6O94906 941 aaKnown RBP6.87□□□□□ -1.31
CAST-243ENST00000515160 MMEP08473 750 aa6.87□□□□□ -1.31
CAST-243ENST00000515160 ECE1P42892 770 aa6.87□□□□□ -1.31
CAST-243ENST00000515160 SLC6A11P48066 632 aa6.87□□□□□ -1.31
CAST-243ENST00000515160 LGALS4P56470 323 aa6.87□□□□□ -1.31
CAST-243ENST00000515160 BCAR1P56945 870 aa6.87□□□□□ -1.31
CAST-243ENST00000515160 HERVK_113P62684 666 aa6.87□□□□□ -1.31
CAST-243ENST00000515160 NFIAQ12857 509 aa6.87□□□□□ -1.31
CAST-243ENST00000515160 SLC15A2Q16348 729 aa6.87□□□□□ -1.31
CAST-243ENST00000515160 CPSF6Q16630 551 aaKnown RBP eCLIP6.87□□□□□ -1.31
CAST-243ENST00000515160 ANO4Q32M45 955 aa6.87□□□□□ -1.31
CAST-243ENST00000515160 RNF220Q5VTB9 566 aa6.87□□□□□ -1.31
CAST-243ENST00000515160 SPTY2D1Q68D10 685 aaPredicted RBP6.87□□□□□ -1.31
CAST-243ENST00000515160 NPNTQ6UXI9 565 aa6.87□□□□□ -1.31
CAST-243ENST00000515160 HIPK4Q8NE63 616 aa6.87□□□□□ -1.31
CAST-243ENST00000515160 POF1BQ8WVV4 589 aa6.87□□□□□ -1.31
CAST-243ENST00000515160 ASB11Q8WXH4 323 aa6.87□□□□□ -1.31
CAST-243ENST00000515160 ASB15Q8WXK1 588 aa6.87□□□□□ -1.31
CAST-243ENST00000515160 LINC01599Q8WXQ3 324 aa6.87□□□□□ -1.31
CAST-243ENST00000515160 TP53INP1Q96A56 240 aa6.87□□□□□ -1.31
CAST-243ENST00000515160 SCLT1Q96NL6 688 aa6.87□□□□□ -1.31
CAST-243ENST00000515160 MYL10Q9BUA6 226 aa6.87□□□□□ -1.31
CAST-243ENST00000515160 ACE2Q9BYF1 805 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms