RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 MXRA7P84157 204 aa5.78□□□□□ -1.48
NEDD4-211ENST00000514893 CD69Q07108 199 aa5.78□□□□□ -1.48
NEDD4-211ENST00000514893 RASA3Q14644 834 aa5.78□□□□□ -1.48
NEDD4-211ENST00000514893 SPATA31D4Q6ZUB0 917 aa5.78□□□□□ -1.48
NEDD4-211ENST00000514893 GPRIN1Q7Z2K8 1008 aa5.78□□□□□ -1.48
NEDD4-211ENST00000514893 CPEB3Q8NE35 698 aaKnown RBP5.78□□□□□ -1.48
NEDD4-211ENST00000514893 PIK3C3Q8NEB9 887 aa5.78□□□□□ -1.48
NEDD4-211ENST00000514893 TANGO6Q9C0B7 1094 aa5.78□□□□□ -1.48
NEDD4-211ENST00000514893 LEFTY2O00292 366 aa5.77□□□□□ -1.49
NEDD4-211ENST00000514893 OPA1O60313 960 aa5.77□□□□□ -1.49
NEDD4-211ENST00000514893 PCDH8O95206 1070 aa5.77□□□□□ -1.49
NEDD4-211ENST00000514893 RBP3P10745 1247 aa5.77□□□□□ -1.49
NEDD4-211ENST00000514893 ZSCAN20P17040 1043 aaPredicted RBP5.77□□□□□ -1.49
NEDD4-211ENST00000514893 TYRP1P17643 537 aa5.77□□□□□ -1.49
NEDD4-211ENST00000514893 XPAP23025 273 aaPredicted RBP5.77□□□□□ -1.49
NEDD4-211ENST00000514893 DDX6P26196 483 aaKnown RBP eCLIP5.77□□□□□ -1.49
NEDD4-211ENST00000514893 RNASE9P60153 205 aaKnown RBP5.77□□□□□ -1.49
NEDD4-211ENST00000514893 NHLH2Q02577 135 aa5.77□□□□□ -1.49
NEDD4-211ENST00000514893 FOXI1Q12951 378 aa5.77□□□□□ -1.49
NEDD4-211ENST00000514893 SERINC3Q13530 473 aa5.77□□□□□ -1.49
NEDD4-211ENST00000514893 ARMC6Q6NXE6 501 aa5.77□□□□□ -1.49
NEDD4-211ENST00000514893 CDYL2Q8N8U2 506 aa5.77□□□□□ -1.49
NEDD4-211ENST00000514893 BOLLQ8N9W6 283 aaKnown RBP5.77□□□□□ -1.49
NEDD4-211ENST00000514893 POFUT1Q9H488 388 aa5.77□□□□□ -1.49
NEDD4-211ENST00000514893 TOMM22Q9NS69 142 aa5.77□□□□□ -1.49
NEDD4-211ENST00000514893 SNTG2Q9NY99 539 aa5.77□□□□□ -1.49
NEDD4-211ENST00000514893 PCDHB6Q9Y5E3 794 aa5.77□□□□□ -1.49
NEDD4-211ENST00000514893 ZNF185O15231 689 aa5.76□□□□□ -1.49
NEDD4-211ENST00000514893 NRP2O60462 931 aa5.76□□□□□ -1.49
NEDD4-211ENST00000514893 LY86O95711 162 aa5.76□□□□□ -1.49
NEDD4-211ENST00000514893 FNDC3BQ53EP0 1204 aaKnown RBP5.76□□□□□ -1.49
NEDD4-211ENST00000514893 ESRP1Q6NXG1 681 aaKnown RBP5.76□□□□□ -1.49
NEDD4-211ENST00000514893 EFCAB12Q6NXP0 572 aa5.76□□□□□ -1.49
NEDD4-211ENST00000514893 MICALCLQ6ZW33 695 aa5.76□□□□□ -1.49
NEDD4-211ENST00000514893 BHLHA9Q7RTU4 235 aa5.76□□□□□ -1.49
NEDD4-211ENST00000514893 XYLT1Q86Y38 959 aa5.76□□□□□ -1.49
NEDD4-211ENST00000514893 RTF1Q92541 710 aaKnown RBP5.76□□□□□ -1.49
NEDD4-211ENST00000514893 SRPK1Q96SB4 655 aaKnown RBP5.76□□□□□ -1.49
NEDD4-211ENST00000514893 PRDM13Q9H4Q3 707 aa5.76□□□□□ -1.49
NEDD4-211ENST00000514893 PODXL2Q9NZ53 605 aa5.76□□□□□ -1.49
NEDD4-211ENST00000514893 RNF181Q9P0P0 153 aa5.76□□□□□ -1.49
NEDD4-211ENST00000514893 RAPGEF3O95398 923 aa5.75□□□□□ -1.49
NEDD4-211ENST00000514893 CLEC2LP0C7M8 214 aa5.75□□□□□ -1.49
NEDD4-211ENST00000514893 MPP3Q13368 585 aa5.75□□□□□ -1.49
NEDD4-211ENST00000514893 PIK3R6Q5UE93 754 aa5.75□□□□□ -1.49
NEDD4-211ENST00000514893 FAM98AQ8NCA5 519 aaKnown RBP5.75□□□□□ -1.49
NEDD4-211ENST00000514893 MKL1Q969V6 931 aa5.75□□□□□ -1.49
NEDD4-211ENST00000514893 LRFN3Q9BTN0 628 aa5.75□□□□□ -1.49
NEDD4-211ENST00000514893 INTS7Q9NVH2 962 aaKnown RBP5.75□□□□□ -1.49
NEDD4-211ENST00000514893 POGKQ9P215 609 aa5.75□□□□□ -1.49
NEDD4-211ENST00000514893 TLK1Q9UKI8 766 aa5.75□□□□□ -1.49
NEDD4-211ENST00000514893 ST20-MTHFSA0A0A6YYL1 179 aa5.74□□□□□ -1.49
NEDD4-211ENST00000514893 CBX4O00257 560 aa5.74□□□□□ -1.49
NEDD4-211ENST00000514893 CD40P25942 277 aa5.74□□□□□ -1.49
NEDD4-211ENST00000514893 GTF2F1P35269 517 aaKnown RBP eCLIP5.74□□□□□ -1.49
NEDD4-211ENST00000514893 PTH2RP49190 550 aa5.74□□□□□ -1.49
NEDD4-211ENST00000514893 GPR15P49685 360 aa5.74□□□□□ -1.49
NEDD4-211ENST00000514893 NRG3P56975 720 aa5.74□□□□□ -1.49
NEDD4-211ENST00000514893 APBA1Q02410 837 aa5.74□□□□□ -1.49
NEDD4-211ENST00000514893 RBL2Q08999 1139 aa5.74□□□□□ -1.49
NEDD4-211ENST00000514893 NAALADL2Q58DX5 795 aa5.74□□□□□ -1.49
NEDD4-211ENST00000514893 CCDC178Q5BJE1 867 aa5.74□□□□□ -1.49
NEDD4-211ENST00000514893 ZNF362Q5T0B9 420 aaPredicted RBP5.74□□□□□ -1.49
NEDD4-211ENST00000514893 PASD1Q8IV76 773 aa5.74□□□□□ -1.49
NEDD4-211ENST00000514893 ARMC5Q96C12 935 aa5.74□□□□□ -1.49
NEDD4-211ENST00000514893 DUSP26Q9BV47 211 aa5.74□□□□□ -1.49
NEDD4-211ENST00000514893 IFT57Q9NWB7 429 aa5.74□□□□□ -1.49
NEDD4-211ENST00000514893 OXSMQ9NWU1 459 aa5.74□□□□□ -1.49
NEDD4-211ENST00000514893 TESQ9UGI8 421 aaKnown RBP5.74□□□□□ -1.49
NEDD4-211ENST00000514893 ZKSCAN5Q9Y2L8 839 aa5.74□□□□□ -1.49
NEDD4-211ENST00000514893 FPGT-TNNI3KV9GXZ4 949 aa5.74□□□□□ -1.49
NEDD4-211ENST00000514893 UNC119BA6NIH7 251 aa5.73□□□□□ -1.49
NEDD4-211ENST00000514893 EGR2P11161 476 aaPredicted RBP5.73□□□□□ -1.49
NEDD4-211ENST00000514893 MPLP40238 635 aa5.73□□□□□ -1.49
NEDD4-211ENST00000514893 LRRC32Q14392 662 aa5.73□□□□□ -1.49
NEDD4-211ENST00000514893 C2orf27AQ580R0 203 aa5.73□□□□□ -1.49
NEDD4-211ENST00000514893 SOGA3Q5TF21 947 aa5.73□□□□□ -1.49
NEDD4-211ENST00000514893 LMBR1LQ6UX01 489 aa5.73□□□□□ -1.49
NEDD4-211ENST00000514893 ESPNLQ6ZVH7 1005 aa5.73□□□□□ -1.49
NEDD4-211ENST00000514893 OR10H5Q8NGA6 315 aa5.73□□□□□ -1.49
NEDD4-211ENST00000514893 GAB3Q8WWW8 586 aa5.73□□□□□ -1.49
NEDD4-211ENST00000514893 USP18Q9UMW8 372 aa5.73□□□□□ -1.49
NEDD4-211ENST00000514893 PTCH2Q9Y6C5 1203 aa5.73□□□□□ -1.49
NEDD4-211ENST00000514893 TBKBP1A7MCY6 615 aa5.72□□□□□ -1.49
NEDD4-211ENST00000514893 B5MCH6 92 aa5.72□□□□□ -1.49
NEDD4-211ENST00000514893 PLA2G5P39877 138 aa5.72□□□□□ -1.49
NEDD4-211ENST00000514893 RESTQ13127 1097 aa5.72□□□□□ -1.49
NEDD4-211ENST00000514893 TP53BP2Q13625 1128 aa5.72□□□□□ -1.49
NEDD4-211ENST00000514893 CFAP100Q494V2 611 aa5.72□□□□□ -1.49
NEDD4-211ENST00000514893 PDCD4Q53EL6 469 aaKnown RBP5.72□□□□□ -1.49
NEDD4-211ENST00000514893 CDCA2Q69YH5 1023 aaPredicted RBP5.72□□□□□ -1.49
NEDD4-211ENST00000514893 SYT12Q8IV01 421 aa5.72□□□□□ -1.49
NEDD4-211ENST00000514893 CLUHP3Q96NS8 147 aa5.72□□□□□ -1.49
NEDD4-211ENST00000514893 CDC5LQ99459 802 aaKnown RBP5.72□□□□□ -1.49
NEDD4-211ENST00000514893 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.72□□□□□ -1.49
NEDD4-211ENST00000514893 MAST3O60307 1309 aa5.72□□□□□ -1.49
NEDD4-211ENST00000514893 A0A1W2PR48 441 aa5.71□□□□□ -1.5
NEDD4-211ENST00000514893 PROB1E7EW31 1015 aa5.71□□□□□ -1.5
NEDD4-211ENST00000514893 SEC24DO94855 1032 aaPredicted RBP5.71□□□□□ -1.5
NEDD4-211ENST00000514893 FOSP01100 380 aaPredicted RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms