RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 KRT9P35527 623 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 TXKP42681 527 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 CD97P48960 835 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 EHHADHQ08426 723 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 MSLNQ13421 630 aaPredicted RBP8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 ECM1Q16610 540 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 UBE2SQ16763 222 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 CCDC153Q494R4 210 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 FAM209AQ5JX71 171 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 PPP1R18Q6NYC8 613 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 KCNK18Q7Z418 384 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 MAATS1Q7Z4T9 603 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 BRSK2Q8IWQ3 736 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 TEX9Q8N6V9 391 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 TRIM47Q96LD4 638 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 NUP88Q99567 741 aaPredicted RBP8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 SEMA6BQ9H3T3 888 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 ABCB6Q9NP58 842 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 PCSK1NQ9UHG2 260 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 L1RE1Q9UN81 338 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 CLEC11AQ9Y240 323 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 PNMA6FA0A0J9YX94 578 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 POTEB2H3BUK9 544 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 VARSP26640 1264 aaKnown RBP8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 KLK7P49862 253 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 CALCRLQ16602 461 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 TMEM119Q4V9L6 283 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 ZNF569Q5MCW4 686 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 CCDC122Q5T0U0 273 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 SMYD5Q6GMV2 418 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 CYP26C1Q6V0L0 522 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 ZSCAN29Q8IWY8 852 aaPredicted RBP8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 GOLM1Q8NBJ4 401 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 HAS1Q92839 578 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 CDHR1Q96JP9 859 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 SCYL1Q96KG9 808 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 ZC3H12CQ9C0D7 883 aaKnown RBP8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 CAPN11Q9UMQ6 739 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 ZNF711Q9Y462 761 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 USP17L10C9JJH3 530 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 PYGMP11217 842 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 S100A1P23297 94 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 CHKAP35790 457 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 ASIC1P78348 528 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 ADAM9Q13443 819 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 PCSK7Q16549 785 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 BBS9Q3SYG4 887 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 PPP4R3AQ6IN85 833 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 SH3BP5LQ7L8J4 393 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 FAM20CQ8IXL6 584 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 CCHCR1Q8TD31 782 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 KIFAP3Q92845 792 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 VPS50Q96JG6 964 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 C1orf74Q96LT6 269 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 ARHGEF38Q9NXL2 777 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 TFR2Q9UP52 801 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 KCNJ13O60928 360 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 FLOT1O75955 427 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 CETN2P41208 172 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 GEMIN4P57678 1058 aaKnown RBP8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 MEA1Q16626 185 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 CENPPQ6IPU0 288 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 CNNM4Q6P4Q7 775 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 KCTD1Q719H9 257 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 CSGALNACT2Q8N6G5 542 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 RBM46Q8TBY0 533 aaKnown RBP8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 NOC3LQ8WTT2 800 aaKnown RBP8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 GJA10Q969M2 543 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 CNOT6LQ96LI5 555 aaKnown RBP8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 UQCC2Q9BRT2 126 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 TUBGCP2Q9BSJ2 902 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 MOV10L1Q9BXT6 1211 aaKnown RBP8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 NDFIP2Q9NV92 336 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 FKBP14Q9NWM8 211 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 LRWD1Q9UFC0 647 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 SFMBT1Q9UHJ3 866 aa8.01□□□□□ -1.13
PDLIM5-219ENST00000514743 DDTLA6NHG4 134 aaPredicted RBP8□□□□□ -1.13
PDLIM5-219ENST00000514743 SPDYE16A6NNV3 312 aaPredicted RBP8□□□□□ -1.13
PDLIM5-219ENST00000514743 TSPAN1O60635 241 aa8□□□□□ -1.13
PDLIM5-219ENST00000514743 SNX2O60749 519 aa8□□□□□ -1.13
PDLIM5-219ENST00000514743 PRPF6O94906 941 aaKnown RBP8□□□□□ -1.13
PDLIM5-219ENST00000514743 PRLRP16471 622 aa8□□□□□ -1.13
PDLIM5-219ENST00000514743 CRKP46108 304 aa8□□□□□ -1.13
PDLIM5-219ENST00000514743 HERVK_113P62684 666 aa8□□□□□ -1.13
PDLIM5-219ENST00000514743 STIM1Q13586 685 aa8□□□□□ -1.13
PDLIM5-219ENST00000514743 TRIM68Q6AZZ1 485 aa8□□□□□ -1.13
PDLIM5-219ENST00000514743 IQCEQ6IPM2 695 aa8□□□□□ -1.13
PDLIM5-219ENST00000514743 SIAH1Q8IUQ4 282 aa8□□□□□ -1.13
PDLIM5-219ENST00000514743 SLC35F6Q8N357 371 aa8□□□□□ -1.13
PDLIM5-219ENST00000514743 LARP4BQ92615 738 aaKnown RBP8□□□□□ -1.13
PDLIM5-219ENST00000514743 SGCDQ92629 289 aa8□□□□□ -1.13
PDLIM5-219ENST00000514743 GLMNQ92990 594 aa8□□□□□ -1.13
PDLIM5-219ENST00000514743 CNKSR1Q969H4 720 aa8□□□□□ -1.13
PDLIM5-219ENST00000514743 ZDHHC15Q96MV8 337 aa8□□□□□ -1.13
PDLIM5-219ENST00000514743 HNRNPABQ99729 332 aaKnown RBP8□□□□□ -1.13
PDLIM5-219ENST00000514743 SLF1Q9BQI6 1058 aa8□□□□□ -1.13
PDLIM5-219ENST00000514743 PARVGQ9HBI0 331 aa8□□□□□ -1.13
PDLIM5-219ENST00000514743 AGPAT5Q9NUQ2 364 aa8□□□□□ -1.13
PDLIM5-219ENST00000514743 STK17AQ9UEE5 414 aa8□□□□□ -1.13
PDLIM5-219ENST00000514743 FAM198AQ9UFP1 575 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms