RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 TLR2O60603 784 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 TRPA1O75762 1119 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 NPTXRO95502 500 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 RARGP13631 454 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 PPP2R2AP63151 447 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 OTUD4Q01804 1114 aaKnown RBP7.75□□□□□ -1.17
NIPBL-208ENST00000514335 KIF5AQ12840 1032 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 BLMHQ13867 455 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 SNCBQ16143 134 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 SGCAQ16586 387 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 ANO4Q32M45 955 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 TMEM164Q5U3C3 297 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 TPGS2Q68CL5 300 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 ABRAXAS1Q6UWZ7 409 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 BRAPQ7Z569 592 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 ZNF467Q7Z7K2 595 aaPredicted RBP7.75□□□□□ -1.17
NIPBL-208ENST00000514335 ITPRIPQ8IWB1 547 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 PSD4Q8NDX1 1056 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 DQX1Q8TE96 717 aaKnown RBP7.75□□□□□ -1.17
NIPBL-208ENST00000514335 DDI1Q8WTU0 396 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 PMEPA1Q969W9 287 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 RADILQ96JH8 1075 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 PPP1R14DQ9NXH3 145 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 VPS18Q9P253 973 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 PDP2Q9P2J9 529 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 FAM50BQ9Y247 325 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 PCDHGA8Q9Y5G5 932 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.75□□□□□ -1.17
NIPBL-208ENST00000514335 NSD2O96028 1365 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 OR6C65A6NJZ3 312 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 WDR46O15213 610 aaKnown RBP7.74□□□□□ -1.17
NIPBL-208ENST00000514335 AKAP10O43572 662 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 ATP9AO75110 1047 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 FSBPO95073 299 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 TBC1D8O95759 1140 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 CHRNB1P11230 501 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 SOX6P35712 828 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 PCP4P48539 62 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 KRT85P78386 507 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 TBL3Q12788 808 aaKnown RBP7.74□□□□□ -1.17
NIPBL-208ENST00000514335 MTMR3Q13615 1198 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 MMEL1Q495T6 779 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 ATP13A4Q4VNC1 1196 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 CCDC38Q502W7 563 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 ZNF619Q8N2I2 560 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 CEP112Q8N8E3 955 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 SCAIQ8N9R8 606 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 DNAJB8Q8NHS0 232 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 TNFRSF25Q93038 417 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 ZNF845Q96IR2 970 aaPredicted RBP7.74□□□□□ -1.17
NIPBL-208ENST00000514335 CAMKK2Q96RR4 588 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 SMAD5Q99717 465 aaKnown RBP7.74□□□□□ -1.17
NIPBL-208ENST00000514335 NUDT12Q9BQG2 462 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 NLRC4Q9NPP4 1024 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 ZFATQ9P243 1243 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 DUSP12Q9UNI6 340 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 C5P01031 1676 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 SPDYE2BA6NHP3 402 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 HNRNPRO43390 633 aaKnown RBP7.74□□□□□ -1.17
NIPBL-208ENST00000514335 RASSF9O75901 435 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 PIGNO95427 931 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 DNTTP04053 509 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 SPDYE6P0CI01 402 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 TXLNAP40222 546 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 CPT1AP50416 773 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 ETV1P50549 477 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 MLLT6P55198 1093 aaPredicted RBP7.74□□□□□ -1.17
NIPBL-208ENST00000514335 POLE2P56282 527 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 RPP38P78345 283 aaKnown RBP7.74□□□□□ -1.17
NIPBL-208ENST00000514335 PPFIA1Q13136 1202 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 HLTFQ14527 1009 aaKnown RBP eCLIP7.74□□□□□ -1.17
NIPBL-208ENST00000514335 ERCC6LQ2NKX8 1250 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 SPDYE2Q495Y8 402 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 TTBK2Q6IQ55 1244 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 NUP54Q7Z3B4 507 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 PPP1R42Q7Z4L9 355 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 NRSN1Q8IZ57 195 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 CFAP61Q8NHU2 1237 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 HS6ST2Q96MM7 605 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 SIKE1Q9BRV8 207 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 GBP3Q9H0R5 595 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 POLR3EQ9NVU0 708 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 ASB3Q9Y575 518 aa7.74□□□□□ -1.17
NIPBL-208ENST00000514335 RGPD8O14715 1765 aaPredicted RBP7.74□□□□□ -1.17
NIPBL-208ENST00000514335 KDM2BQ8NHM5 1336 aa7.73□□□□□ -1.17
NIPBL-208ENST00000514335 SSH2Q76I76 1423 aa7.73□□□□□ -1.17
NIPBL-208ENST00000514335 NUTM2BA6NNL0 878 aaPredicted RBP7.73□□□□□ -1.17
NIPBL-208ENST00000514335 A8MVJ9 347 aa7.73□□□□□ -1.17
NIPBL-208ENST00000514335 NUTM2EB1AL46 878 aaPredicted RBP7.73□□□□□ -1.17
NIPBL-208ENST00000514335 UBXN8O00124 270 aa7.73□□□□□ -1.17
NIPBL-208ENST00000514335 ENC1O14682 589 aa7.73□□□□□ -1.17
NIPBL-208ENST00000514335 URODP06132 367 aa7.73□□□□□ -1.17
NIPBL-208ENST00000514335 SYT1P21579 422 aa7.73□□□□□ -1.17
NIPBL-208ENST00000514335 CDH3P22223 829 aa7.73□□□□□ -1.17
NIPBL-208ENST00000514335 ACSL1P33121 698 aa7.73□□□□□ -1.17
NIPBL-208ENST00000514335 ECE1P42892 770 aa7.73□□□□□ -1.17
NIPBL-208ENST00000514335 MAPK9P45984 424 aa7.73□□□□□ -1.17
NIPBL-208ENST00000514335 POU3F4P49335 361 aa7.73□□□□□ -1.17
NIPBL-208ENST00000514335 SERPINB8P50452 374 aa7.73□□□□□ -1.17
NIPBL-208ENST00000514335 PDE1BQ01064 536 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms