RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 CAPSQ13938 189 aa16.22■□□□□ 0.19
VCAN-211ENST00000513984 COPS5Q92905 334 aa16.22■□□□□ 0.19
VCAN-211ENST00000513984 MAP7D2Q96T17 732 aa16.22■□□□□ 0.19
VCAN-211ENST00000513984 KIAA1586Q9HCI6 787 aa16.22■□□□□ 0.19
VCAN-211ENST00000513984 SALL4Q9UJQ4 1053 aa16.22■□□□□ 0.19
VCAN-211ENST00000513984 COQ4Q9Y3A0 265 aa16.22■□□□□ 0.19
VCAN-211ENST00000513984 IVNS1ABPQ9Y6Y0 642 aa16.22■□□□□ 0.19
VCAN-211ENST00000513984 IGKV6-21A0A0C4DH24 114 aa16.22■□□□□ 0.19
VCAN-211ENST00000513984 RBM47A0AV96 593 aaKnown RBP16.22■□□□□ 0.19
VCAN-211ENST00000513984 ENC1O14682 589 aa16.22■□□□□ 0.19
VCAN-211ENST00000513984 PNMA6AP0CW24 399 aaPredicted RBP16.22■□□□□ 0.19
VCAN-211ENST00000513984 BMS1Q14692 1282 aaKnown RBP16.22■□□□□ 0.19
VCAN-211ENST00000513984 PLCB4Q15147 1175 aa16.22■□□□□ 0.19
VCAN-211ENST00000513984 FAM110CQ1W6H9 321 aa16.22■□□□□ 0.19
VCAN-211ENST00000513984 KRT39Q6A163 491 aa16.22■□□□□ 0.19
VCAN-211ENST00000513984 TAPT1Q6NXT6 567 aa16.22■□□□□ 0.19
VCAN-211ENST00000513984 VPS36Q86VN1 386 aa16.22■□□□□ 0.19
VCAN-211ENST00000513984 ALS2CR12Q96Q35 445 aa16.22■□□□□ 0.19
VCAN-211ENST00000513984 SMARCAD1Q9H4L7 1026 aa16.22■□□□□ 0.19
VCAN-211ENST00000513984 TMEM8AQ9HCN3 771 aa16.22■□□□□ 0.19
VCAN-211ENST00000513984 NAGPAQ9UK23 515 aa16.22■□□□□ 0.19
VCAN-211ENST00000513984 JRKLQ9Y4A0 524 aa16.22■□□□□ 0.19
VCAN-211ENST00000513984 KAT6AQ92794 2004 aa16.21■□□□□ 0.19
VCAN-211ENST00000513984 BTNL10A8MVZ5 291 aa16.21■□□□□ 0.19
VCAN-211ENST00000513984 K7ERI5 159 aa16.21■□□□□ 0.19
VCAN-211ENST00000513984 EXTL3O43909 919 aa16.21■□□□□ 0.19
VCAN-211ENST00000513984 ADCY3O60266 1144 aa16.21■□□□□ 0.19
VCAN-211ENST00000513984 MOCS3O95396 460 aa16.21■□□□□ 0.19
VCAN-211ENST00000513984 CCDC172P0C7W6 258 aa16.21■□□□□ 0.19
VCAN-211ENST00000513984 MARK3P27448 753 aa16.21■□□□□ 0.19
VCAN-211ENST00000513984 ARHGAP1Q07960 439 aa16.21■□□□□ 0.19
VCAN-211ENST00000513984 GRB14Q14449 540 aa16.21■□□□□ 0.19
VCAN-211ENST00000513984 NAB2Q15742 525 aa16.21■□□□□ 0.19
VCAN-211ENST00000513984 TMEM63BQ5T3F8 832 aa16.21■□□□□ 0.19
VCAN-211ENST00000513984 IER5Q5VY09 327 aa16.21■□□□□ 0.19
VCAN-211ENST00000513984 OLIG1Q8TAK6 271 aa16.21■□□□□ 0.19
VCAN-211ENST00000513984 TCP11Q8WWU5 503 aa16.21■□□□□ 0.19
VCAN-211ENST00000513984 PTPN18Q99952 460 aa16.21■□□□□ 0.19
VCAN-211ENST00000513984 SYT11Q9BT88 431 aa16.21■□□□□ 0.19
VCAN-211ENST00000513984 SAR1BQ9Y6B6 198 aa16.21■□□□□ 0.19
VCAN-211ENST00000513984 ZNF233A6NK53 670 aa16.2■□□□□ 0.18
VCAN-211ENST00000513984 CHMP4BP1P59074 171 aa16.2■□□□□ 0.18
VCAN-211ENST00000513984 DRP2Q13474 957 aa16.2■□□□□ 0.18
VCAN-211ENST00000513984 HSP90AA2PQ14568 343 aaPredicted RBP16.2■□□□□ 0.18
VCAN-211ENST00000513984 SLFN12LQ6IEE8 588 aa16.2■□□□□ 0.18
VCAN-211ENST00000513984 MAMDC4Q6UXC1 1216 aa16.2■□□□□ 0.18
VCAN-211ENST00000513984 GPR142Q7Z601 462 aa16.2■□□□□ 0.18
VCAN-211ENST00000513984 ARHGEF19Q8IW93 802 aa16.2■□□□□ 0.18
VCAN-211ENST00000513984 PDCL2Q8N4E4 241 aa16.2■□□□□ 0.18
VCAN-211ENST00000513984 GOLGA1Q92805 767 aa16.2■□□□□ 0.18
VCAN-211ENST00000513984 CCDC127Q96BQ5 260 aa16.2■□□□□ 0.18
VCAN-211ENST00000513984 NOX5Q96PH1 765 aa16.2■□□□□ 0.18
VCAN-211ENST00000513984 JPH2Q9BR39 696 aaPredicted RBP16.2■□□□□ 0.18
VCAN-211ENST00000513984 FAM213AQ9BRX8 229 aa16.2■□□□□ 0.18
VCAN-211ENST00000513984 KATNBL1Q9H079 304 aa16.2■□□□□ 0.18
VCAN-211ENST00000513984 HDAC6Q9UBN7 1215 aa16.2■□□□□ 0.18
VCAN-211ENST00000513984 HBP1O60381 514 aa16.19■□□□□ 0.18
VCAN-211ENST00000513984 GPC3P51654 580 aa16.19■□□□□ 0.18
VCAN-211ENST00000513984 CLDN10P78369 228 aa16.19■□□□□ 0.18
VCAN-211ENST00000513984 MKRN4PQ13434 485 aaPredicted RBP16.19■□□□□ 0.18
VCAN-211ENST00000513984 LAMC2Q13753 1193 aa16.19■□□□□ 0.18
VCAN-211ENST00000513984 MXD4Q14582 209 aaPredicted RBP16.19■□□□□ 0.18
VCAN-211ENST00000513984 KIF22Q14807 665 aa16.19■□□□□ 0.18
VCAN-211ENST00000513984 KIAA0753Q2KHM9 967 aa16.19■□□□□ 0.18
VCAN-211ENST00000513984 CST9Q5W186 159 aa16.19■□□□□ 0.18
VCAN-211ENST00000513984 CDCA2Q69YH5 1023 aaPredicted RBP16.19■□□□□ 0.18
VCAN-211ENST00000513984 ALKBH5Q6P6C2 394 aaKnown RBP16.19■□□□□ 0.18
VCAN-211ENST00000513984 SLC30A5Q8TAD4 765 aa16.19■□□□□ 0.18
VCAN-211ENST00000513984 PRPF31Q8WWY3 499 aaKnown RBP16.19■□□□□ 0.18
VCAN-211ENST00000513984 PSPC1Q8WXF1 523 aaKnown RBP16.19■□□□□ 0.18
VCAN-211ENST00000513984 RABGGTAQ92696 567 aa16.19■□□□□ 0.18
VCAN-211ENST00000513984 EMID1Q96A84 441 aaPredicted RBP16.19■□□□□ 0.18
VCAN-211ENST00000513984 PACSIN1Q9BY11 444 aa16.19■□□□□ 0.18
VCAN-211ENST00000513984 UBE2TQ9NPD8 197 aaPredicted RBP16.19■□□□□ 0.18
VCAN-211ENST00000513984 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.19■□□□□ 0.18
VCAN-211ENST00000513984 AGO2Q9UKV8 859 aaKnown RBP16.19■□□□□ 0.18
VCAN-211ENST00000513984 DDX3XO00571 662 aaKnown RBP eCLIP16.19■□□□□ 0.18
VCAN-211ENST00000513984 LRRN2O75325 713 aa16.19■□□□□ 0.18
VCAN-211ENST00000513984 GH1P01241 217 aa16.19■□□□□ 0.18
VCAN-211ENST00000513984 KLRC1P26715 233 aa16.19■□□□□ 0.18
VCAN-211ENST00000513984 EFNA5P52803 228 aa16.19■□□□□ 0.18
VCAN-211ENST00000513984 TUBB4BP68371 445 aa16.19■□□□□ 0.18
VCAN-211ENST00000513984 MAP2K1Q02750 393 aaPredicted RBP16.19■□□□□ 0.18
VCAN-211ENST00000513984 PSMD6Q15008 389 aa16.19■□□□□ 0.18
VCAN-211ENST00000513984 ARHGAP44Q17R89 818 aa16.19■□□□□ 0.18
VCAN-211ENST00000513984 HAPLN2Q9GZV7 340 aa16.19■□□□□ 0.18
VCAN-211ENST00000513984 CCDC113Q9H0I3 377 aa16.19■□□□□ 0.18
VCAN-211ENST00000513984 INTUQ9ULD6 942 aa16.19■□□□□ 0.18
VCAN-211ENST00000513984 ANK1P16157 1881 aa16.19■□□□□ 0.18
VCAN-211ENST00000513984 FOXN3O00409 490 aaPredicted RBP16.18■□□□□ 0.18
VCAN-211ENST00000513984 LDHAP00338 332 aaKnown RBP16.18■□□□□ 0.18
VCAN-211ENST00000513984 TFRCP02786 760 aaKnown RBP16.18■□□□□ 0.18
VCAN-211ENST00000513984 EDN1P05305 212 aa16.18■□□□□ 0.18
VCAN-211ENST00000513984 H2AFXP16104 143 aaPredicted RBP16.18■□□□□ 0.18
VCAN-211ENST00000513984 MAPK4P31152 587 aa16.18■□□□□ 0.18
VCAN-211ENST00000513984 TEX35Q5T0J7 233 aa16.18■□□□□ 0.18
VCAN-211ENST00000513984 ZPBP2Q6X784 338 aa16.18■□□□□ 0.18
VCAN-211ENST00000513984 C15orf39Q6ZRI6 1047 aa16.18■□□□□ 0.18
VCAN-211ENST00000513984 FBXL13Q8NEE6 735 aa16.18■□□□□ 0.18
VCAN-211ENST00000513984 LNX1Q8TBB1 728 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms