RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 CDX2Q99626 313 aaPredicted RBP9.03□□□□□ -0.96
NEDD4-210ENST00000513957 ADPGKQ9BRR6 497 aa9.03□□□□□ -0.96
NEDD4-210ENST00000513957 C11orf84Q9BUA3 381 aaPredicted RBP9.03□□□□□ -0.96
NEDD4-210ENST00000513957 RUSC1Q9BVN2 902 aa9.03□□□□□ -0.96
NEDD4-210ENST00000513957 LRRC27Q9C0I9 530 aa9.03□□□□□ -0.96
NEDD4-210ENST00000513957 SCAND2PQ9GZW5 306 aaPredicted RBP9.03□□□□□ -0.96
NEDD4-210ENST00000513957 CCDC113Q9H0I3 377 aa9.03□□□□□ -0.96
NEDD4-210ENST00000513957 LMAN2LQ9H0V9 348 aa9.03□□□□□ -0.96
NEDD4-210ENST00000513957 TNMDQ9H2S6 317 aa9.03□□□□□ -0.96
NEDD4-210ENST00000513957 TMEM134Q9H6X4 195 aa9.03□□□□□ -0.96
NEDD4-210ENST00000513957 MINDY3Q9H8M7 445 aa9.03□□□□□ -0.96
NEDD4-210ENST00000513957 GPRC5CQ9NQ84 441 aa9.03□□□□□ -0.96
NEDD4-210ENST00000513957 AAASQ9NRG9 546 aa9.03□□□□□ -0.96
NEDD4-210ENST00000513957 BLOC1S4Q9NUP1 217 aa9.03□□□□□ -0.96
NEDD4-210ENST00000513957 ARHGAP28Q9P2N2 729 aa9.03□□□□□ -0.96
NEDD4-210ENST00000513957 SEL1LQ9UBV2 794 aa9.03□□□□□ -0.96
NEDD4-210ENST00000513957 STK39Q9UEW8 545 aa9.03□□□□□ -0.96
NEDD4-210ENST00000513957 CHD7Q9P2D1 2997 aa9.02□□□□□ -0.97
NEDD4-210ENST00000513957 CHD9Q3L8U1 2897 aa9.02□□□□□ -0.97
NEDD4-210ENST00000513957 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.02□□□□□ -0.97
NEDD4-210ENST00000513957 A0A1B0GUA9 196 aa9.02□□□□□ -0.97
NEDD4-210ENST00000513957 LCHNA4D1U4 455 aa9.02□□□□□ -0.97
NEDD4-210ENST00000513957 INPPL1O15357 1258 aa9.02□□□□□ -0.97
NEDD4-210ENST00000513957 SSBP05455 408 aaKnown RBP eCLIP9.02□□□□□ -0.97
NEDD4-210ENST00000513957 PRKCBP05771 671 aa9.02□□□□□ -0.97
NEDD4-210ENST00000513957 FOSL2P15408 326 aa9.02□□□□□ -0.97
NEDD4-210ENST00000513957 ARF4P18085 180 aaPredicted RBP9.02□□□□□ -0.97
NEDD4-210ENST00000513957 LAG3P18627 525 aa9.02□□□□□ -0.97
NEDD4-210ENST00000513957 NCLP19338 710 aaKnown RBP9.02□□□□□ -0.97
NEDD4-210ENST00000513957 HOXA11P31270 313 aaPredicted RBP9.02□□□□□ -0.97
NEDD4-210ENST00000513957 PPM1AP35813 382 aa9.02□□□□□ -0.97
NEDD4-210ENST00000513957 ANP32AP39687 249 aaKnown RBP9.02□□□□□ -0.97
NEDD4-210ENST00000513957 STAT6P42226 847 aa9.02□□□□□ -0.97
NEDD4-210ENST00000513957 NPTX2P47972 431 aa9.02□□□□□ -0.97
NEDD4-210ENST00000513957 ZNF131P52739 623 aa9.02□□□□□ -0.97
NEDD4-210ENST00000513957 MAPK7Q13164 816 aa9.02□□□□□ -0.97
NEDD4-210ENST00000513957 GRIN2CQ14957 1233 aa9.02□□□□□ -0.97
NEDD4-210ENST00000513957 GLB1LQ6UWU2 654 aa9.02□□□□□ -0.97
NEDD4-210ENST00000513957 MAEAQ7L5Y9 396 aa9.02□□□□□ -0.97
NEDD4-210ENST00000513957 TMCO2Q7Z6W1 182 aaPredicted RBP9.02□□□□□ -0.97
NEDD4-210ENST00000513957 MRPL10Q7Z7H8 261 aaKnown RBP9.02□□□□□ -0.97
NEDD4-210ENST00000513957 GPBP1Q86WP2 473 aa9.02□□□□□ -0.97
NEDD4-210ENST00000513957 DAW1Q8N136 415 aa9.02□□□□□ -0.97
NEDD4-210ENST00000513957 EPSTI1Q96J88 318 aa9.02□□□□□ -0.97
NEDD4-210ENST00000513957 ZNF668Q96K58 619 aaPredicted RBP9.02□□□□□ -0.97
NEDD4-210ENST00000513957 PHOX2BQ99453 314 aa9.02□□□□□ -0.97
NEDD4-210ENST00000513957 TRIM6Q9C030 488 aaPredicted RBP9.02□□□□□ -0.97
NEDD4-210ENST00000513957 PARVGQ9HBI0 331 aa9.02□□□□□ -0.97
NEDD4-210ENST00000513957 KMT5AQ9NQR1 393 aa9.02□□□□□ -0.97
NEDD4-210ENST00000513957 KANSL3Q9P2N6 904 aa9.02□□□□□ -0.97
NEDD4-210ENST00000513957 RCOR1Q9UKL0 485 aa9.02□□□□□ -0.97
NEDD4-210ENST00000513957 PCDHB2Q9Y5E7 798 aa9.02□□□□□ -0.97
NEDD4-210ENST00000513957 TRANK1O15050 2925 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 TRIP11Q15643 1979 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 A0A087WWV3 80 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 H3BNC9 293 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 K7ERI5 159 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 TBCAO75347 108 aaKnown RBP9.01□□□□□ -0.97
NEDD4-210ENST00000513957 CSDE1O75534 798 aaKnown RBP9.01□□□□□ -0.97
NEDD4-210ENST00000513957 FAM13AO94988 1023 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 KRT18P05783 430 aaKnown RBP9.01□□□□□ -0.97
NEDD4-210ENST00000513957 LINC00271P0C7V0 271 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 MAPTP10636 758 aaKnown RBP9.01□□□□□ -0.97
NEDD4-210ENST00000513957 ATF7P17544 494 aaPredicted RBP9.01□□□□□ -0.97
NEDD4-210ENST00000513957 FGFR4P22455 802 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 RFX1P22670 979 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 BMPR1AP36894 532 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 ME1P48163 572 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 NCKAP1LP55160 1127 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 PEX3P56589 373 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 AMPD3Q01432 767 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 UBE3AQ05086 875 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 DNM1Q05193 864 aaKnown RBP9.01□□□□□ -0.97
NEDD4-210ENST00000513957 PRPF4BQ13523 1007 aaKnown RBP9.01□□□□□ -0.97
NEDD4-210ENST00000513957 PTPROQ16827 1216 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 DCAF4L1Q3SXM0 396 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 EPC2Q52LR7 807 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 AXDND1Q5T1B0 1012 aaPredicted RBP9.01□□□□□ -0.97
NEDD4-210ENST00000513957 ZPBP2Q6X784 338 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 SV2BQ7L1I2 683 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 TMEM192Q8IY95 271 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 IQUBQ8NA54 791 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 URGCPQ8TCY9 931 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 BSNDQ8WZ55 320 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 HVCN1Q96D96 273 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 FAM161BQ96MY7 647 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 CLIC6Q96NY7 704 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 REEP2Q9BRK0 252 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 MRPL4Q9BYD3 311 aaKnown RBP9.01□□□□□ -0.97
NEDD4-210ENST00000513957 ST6GALNAC4Q9H4F1 302 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 PRDM12Q9H4Q4 367 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 FAM13BQ9NYF5 915 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 USP25Q9UHP3 1055 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 GIT1Q9Y2X7 761 aa9.01□□□□□ -0.97
NEDD4-210ENST00000513957 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.01□□□□□ -0.97
NEDD4-210ENST00000513957 FSD2A1L4K1 749 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 C2orf72A6NCS6 295 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 CCDC169A6NNP5 214 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 TBKBP1A7MCY6 615 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 GAP43P17677 238 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms