RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 PPM1JQ5JR12 505 aa13.54□□□□□ -0.24
PTPN20-229ENST00000513756 TTC22Q5TAA0 569 aa13.54□□□□□ -0.24
PTPN20-229ENST00000513756 GPR65Q8IYL9 337 aa13.54□□□□□ -0.24
PTPN20-229ENST00000513756 NETO1Q8TDF5 533 aa13.54□□□□□ -0.24
PTPN20-229ENST00000513756 NELL1Q92832 810 aa13.54□□□□□ -0.24
PTPN20-229ENST00000513756 FGF14Q92915 247 aa13.54□□□□□ -0.24
PTPN20-229ENST00000513756 JPH2Q9BR39 696 aaPredicted RBP13.54□□□□□ -0.24
PTPN20-229ENST00000513756 NIFKQ9BYG3 293 aaKnown RBP13.54□□□□□ -0.24
PTPN20-229ENST00000513756 AGPAT5Q9NUQ2 364 aa13.54□□□□□ -0.24
PTPN20-229ENST00000513756 FNIP2Q9P278 1114 aa13.54□□□□□ -0.24
PTPN20-229ENST00000513756 SEPT9Q9UHD8 586 aaPredicted RBP13.54□□□□□ -0.24
PTPN20-229ENST00000513756 CDH7Q9ULB5 785 aa13.54□□□□□ -0.24
PTPN20-229ENST00000513756 PATJQ8NI35 1801 aa13.54□□□□□ -0.24
PTPN20-229ENST00000513756 IGKV6-21A0A0C4DH24 114 aa13.53□□□□□ -0.24
PTPN20-229ENST00000513756 GAS7O60861 476 aa13.53□□□□□ -0.24
PTPN20-229ENST00000513756 GSPT1P15170 499 aaKnown RBP13.53□□□□□ -0.24
PTPN20-229ENST00000513756 TGM1P22735 817 aa13.53□□□□□ -0.24
PTPN20-229ENST00000513756 CIITAP33076 1130 aa13.53□□□□□ -0.24
PTPN20-229ENST00000513756 RPS9P46781 194 aaKnown RBP13.53□□□□□ -0.24
PTPN20-229ENST00000513756 NRLP54845 237 aa13.53□□□□□ -0.24
PTPN20-229ENST00000513756 UGCGQ16739 394 aa13.53□□□□□ -0.24
PTPN20-229ENST00000513756 RTN1Q16799 776 aa13.53□□□□□ -0.24
PTPN20-229ENST00000513756 XKR3Q5GH77 459 aa13.53□□□□□ -0.24
PTPN20-229ENST00000513756 PARM1Q6UWI2 310 aa13.53□□□□□ -0.24
PTPN20-229ENST00000513756 COLGALT2Q8IYK4 626 aa13.53□□□□□ -0.24
PTPN20-229ENST00000513756 RNF168Q8IYW5 571 aaPredicted RBP13.53□□□□□ -0.24
PTPN20-229ENST00000513756 CNNM3Q8NE01 707 aa13.53□□□□□ -0.24
PTPN20-229ENST00000513756 NLRP4Q96MN2 994 aa13.53□□□□□ -0.24
PTPN20-229ENST00000513756 RPP25Q9BUL9 199 aaKnown RBP13.53□□□□□ -0.24
PTPN20-229ENST00000513756 LTB4R2Q9NPC1 389 aa13.53□□□□□ -0.24
PTPN20-229ENST00000513756 MARCH5Q9NX47 278 aa13.53□□□□□ -0.24
PTPN20-229ENST00000513756 MTF2Q9Y483 593 aaPredicted RBP13.53□□□□□ -0.24
PTPN20-229ENST00000513756 BAHCC1Q9P281 2608 aa13.52□□□□□ -0.24
PTPN20-229ENST00000513756 SLC30A4O14863 429 aa13.52□□□□□ -0.25
PTPN20-229ENST00000513756 CHMP2AO43633 222 aa13.52□□□□□ -0.25
PTPN20-229ENST00000513756 LRP3O75074 770 aa13.52□□□□□ -0.25
PTPN20-229ENST00000513756 ZMYND10O75800 440 aa13.52□□□□□ -0.25
PTPN20-229ENST00000513756 EFEMP2O95967 443 aa13.52□□□□□ -0.25
PTPN20-229ENST00000513756 IGHDP01880 384 aa13.52□□□□□ -0.25
PTPN20-229ENST00000513756 NCLP19338 710 aaKnown RBP13.52□□□□□ -0.25
PTPN20-229ENST00000513756 AFF1P51825 1210 aaKnown RBP13.52□□□□□ -0.25
PTPN20-229ENST00000513756 FUT2Q10981 343 aa13.52□□□□□ -0.25
PTPN20-229ENST00000513756 PPP2R5DQ14738 602 aa13.52□□□□□ -0.25
PTPN20-229ENST00000513756 USP41Q3LFD5 358 aa13.52□□□□□ -0.25
PTPN20-229ENST00000513756 LILRA6Q6PI73 481 aa13.52□□□□□ -0.25
PTPN20-229ENST00000513756 REXO1Q8N1G1 1221 aaKnown RBP13.52□□□□□ -0.25
PTPN20-229ENST00000513756 ST13P5Q8NFI4 369 aaPredicted RBP13.52□□□□□ -0.25
PTPN20-229ENST00000513756 RDM1Q8NG50 284 aa13.52□□□□□ -0.25
PTPN20-229ENST00000513756 EXOC6Q8TAG9 804 aa13.52□□□□□ -0.25
PTPN20-229ENST00000513756 CCDC12Q8WUD4 166 aaPredicted RBP13.52□□□□□ -0.25
PTPN20-229ENST00000513756 CLDN23Q96B33 292 aa13.52□□□□□ -0.25
PTPN20-229ENST00000513756 RIT2Q99578 217 aa13.52□□□□□ -0.25
PTPN20-229ENST00000513756 COLEC11Q9BWP8 271 aa13.52□□□□□ -0.25
PTPN20-229ENST00000513756 LRRC2Q9BYS8 371 aa13.52□□□□□ -0.25
PTPN20-229ENST00000513756 C6orf50Q9HD87 102 aa13.52□□□□□ -0.25
PTPN20-229ENST00000513756 PARD6AQ9NPB6 346 aa13.52□□□□□ -0.25
PTPN20-229ENST00000513756 CHST7Q9NS84 486 aa13.52□□□□□ -0.25
PTPN20-229ENST00000513756 MRPS17Q9Y2R5 130 aaKnown RBP13.52□□□□□ -0.25
PTPN20-229ENST00000513756 MYH15Q9Y2K3 1946 aa13.52□□□□□ -0.25
PTPN20-229ENST00000513756 ESYT2A0FGR8 921 aa13.51□□□□□ -0.25
PTPN20-229ENST00000513756 ZBTB43O43298 467 aa13.51□□□□□ -0.25
PTPN20-229ENST00000513756 MAFO75444 373 aaPredicted RBP13.51□□□□□ -0.25
PTPN20-229ENST00000513756 HNRNPA1P09651 372 aaKnown RBP eCLIP13.51□□□□□ -0.25
PTPN20-229ENST00000513756 ITGA4P13612 1032 aa13.51□□□□□ -0.25
PTPN20-229ENST00000513756 DMWDQ09019 674 aa13.51□□□□□ -0.25
PTPN20-229ENST00000513756 LAIR1Q6GTX8 287 aa13.51□□□□□ -0.25
PTPN20-229ENST00000513756 APOA5Q6Q788 366 aa13.51□□□□□ -0.25
PTPN20-229ENST00000513756 ZNF852Q6ZMS4 543 aa13.51□□□□□ -0.25
PTPN20-229ENST00000513756 GRASPQ7Z6J2 395 aaPredicted RBP13.51□□□□□ -0.25
PTPN20-229ENST00000513756 CELF5Q8N6W0 485 aaKnown RBP13.51□□□□□ -0.25
PTPN20-229ENST00000513756 DDX1Q92499 740 aaKnown RBP13.51□□□□□ -0.25
PTPN20-229ENST00000513756 CEP89Q96ST8 783 aa13.51□□□□□ -0.25
PTPN20-229ENST00000513756 TEKT3Q9BXF9 490 aa13.51□□□□□ -0.25
PTPN20-229ENST00000513756 ZMYND12Q9H0C1 365 aa13.51□□□□□ -0.25
PTPN20-229ENST00000513756 PRMT8Q9NR22 394 aaPredicted RBP13.51□□□□□ -0.25
PTPN20-229ENST00000513756 MSH4O15457 936 aa13.5□□□□□ -0.25
PTPN20-229ENST00000513756 XYLBO75191 536 aa13.5□□□□□ -0.25
PTPN20-229ENST00000513756 GNA11P29992 359 aa13.5□□□□□ -0.25
PTPN20-229ENST00000513756 SPEM2Q0P670 501 aa13.5□□□□□ -0.25
PTPN20-229ENST00000513756 PFKFB3Q16875 520 aaPredicted RBP13.5□□□□□ -0.25
PTPN20-229ENST00000513756 LIN9Q5TKA1 542 aa13.5□□□□□ -0.25
PTPN20-229ENST00000513756 LRCH2Q5VUJ6 765 aa13.5□□□□□ -0.25
PTPN20-229ENST00000513756 MIER3Q7Z3K6 550 aa13.5□□□□□ -0.25
PTPN20-229ENST00000513756 SRGAP1Q7Z6B7 1085 aa13.5□□□□□ -0.25
PTPN20-229ENST00000513756 GLYCTKQ8IVS8 523 aa13.5□□□□□ -0.25
PTPN20-229ENST00000513756 KSR1Q8IVT5 923 aa13.5□□□□□ -0.25
PTPN20-229ENST00000513756 EXOC8Q8IYI6 725 aa13.5□□□□□ -0.25
PTPN20-229ENST00000513756 BICD2Q8TD16 824 aa13.5□□□□□ -0.25
PTPN20-229ENST00000513756 LENG9Q96B70 501 aa13.5□□□□□ -0.25
PTPN20-229ENST00000513756 MBOAT7Q96N66 472 aa13.5□□□□□ -0.25
PTPN20-229ENST00000513756 PHF20Q9BVI0 1012 aa13.5□□□□□ -0.25
PTPN20-229ENST00000513756 UNC45AQ9H3U1 944 aa13.5□□□□□ -0.25
PTPN20-229ENST00000513756 IFT122Q9HBG6 1241 aa13.5□□□□□ -0.25
PTPN20-229ENST00000513756 FAM217BQ9NTX9 383 aaPredicted RBP13.5□□□□□ -0.25
PTPN20-229ENST00000513756 COL4A3BPQ9Y5P4 624 aa13.5□□□□□ -0.25
PTPN20-229ENST00000513756 ARL5CA6NH57 179 aa13.49□□□□□ -0.25
PTPN20-229ENST00000513756 DDX11L8A8MPP1 907 aa13.49□□□□□ -0.25
PTPN20-229ENST00000513756 SLC27A2O14975 620 aa13.49□□□□□ -0.25
PTPN20-229ENST00000513756 FOXD2O60548 495 aaPredicted RBP13.49□□□□□ -0.25
PTPN20-229ENST00000513756 RETP07949 1114 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms