RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 SHROOM3Q8TF72 1996 aa13.46□□□□□ -0.25
SFXN1-210ENST00000513725 SPAARA0A1B0GVQ0 90 aa13.46□□□□□ -0.25
SFXN1-210ENST00000513725 NRP1O14786 923 aa13.46□□□□□ -0.25
SFXN1-210ENST00000513725 KHNYNO15037 678 aaKnown RBP13.46□□□□□ -0.25
SFXN1-210ENST00000513725 ATXN7O15265 892 aaPredicted RBP13.46□□□□□ -0.25
SFXN1-210ENST00000513725 MAFGO15525 162 aa13.46□□□□□ -0.25
SFXN1-210ENST00000513725 CCNE1P24864 410 aa13.46□□□□□ -0.25
SFXN1-210ENST00000513725 ELF2Q15723 593 aa13.46□□□□□ -0.25
SFXN1-210ENST00000513725 LONRF3Q496Y0 759 aa13.46□□□□□ -0.25
SFXN1-210ENST00000513725 PPM1LQ5SGD2 360 aa13.46□□□□□ -0.25
SFXN1-210ENST00000513725 LIN9Q5TKA1 542 aa13.46□□□□□ -0.25
SFXN1-210ENST00000513725 C1orf228Q6PIY5 440 aa13.46□□□□□ -0.25
SFXN1-210ENST00000513725 IQCA1Q86XH1 822 aa13.46□□□□□ -0.25
SFXN1-210ENST00000513725 TMEFF1Q8IYR6 380 aa13.46□□□□□ -0.25
SFXN1-210ENST00000513725 SMARCC2Q8TAQ2 1214 aa13.46□□□□□ -0.25
SFXN1-210ENST00000513725 ESR2Q92731 530 aa13.46□□□□□ -0.25
SFXN1-210ENST00000513725 GPATCH3Q96I76 525 aa13.46□□□□□ -0.25
SFXN1-210ENST00000513725 TRMT61BQ9BVS5 477 aaKnown RBP13.46□□□□□ -0.25
SFXN1-210ENST00000513725 TRPV5Q9NQA5 729 aa13.46□□□□□ -0.25
SFXN1-210ENST00000513725 CHST12Q9NRB3 414 aa13.46□□□□□ -0.25
SFXN1-210ENST00000513725 GDE1Q9NZC3 331 aa13.46□□□□□ -0.25
SFXN1-210ENST00000513725 AKT3Q9Y243 479 aa13.46□□□□□ -0.25
SFXN1-210ENST00000513725 KLRF2D3W0D1 207 aa13.45□□□□□ -0.26
SFXN1-210ENST00000513725 CDX4O14627 284 aaPredicted RBP13.45□□□□□ -0.26
SFXN1-210ENST00000513725 B4GALT3O60512 393 aa13.45□□□□□ -0.26
SFXN1-210ENST00000513725 DDHD2O94830 711 aa13.45□□□□□ -0.26
SFXN1-210ENST00000513725 RHOBTB1O94844 696 aa13.45□□□□□ -0.26
SFXN1-210ENST00000513725 NTRK1P04629 796 aa13.45□□□□□ -0.26
SFXN1-210ENST00000513725 ITGB5P18084 799 aa13.45□□□□□ -0.26
SFXN1-210ENST00000513725 ACTR2P61160 394 aa13.45□□□□□ -0.26
SFXN1-210ENST00000513725 CREMQ03060 361 aa13.45□□□□□ -0.26
SFXN1-210ENST00000513725 ALX1Q15699 326 aa13.45□□□□□ -0.26
SFXN1-210ENST00000513725 PLK5Q496M5 336 aa13.45□□□□□ -0.26
SFXN1-210ENST00000513725 TANGO2Q6ICL3 276 aa13.45□□□□□ -0.26
SFXN1-210ENST00000513725 GLYCTKQ8IVS8 523 aa13.45□□□□□ -0.26
SFXN1-210ENST00000513725 ZNF843Q8N446 348 aa13.45□□□□□ -0.26
SFXN1-210ENST00000513725 LSM14AQ8ND56 463 aaKnown RBP13.45□□□□□ -0.26
SFXN1-210ENST00000513725 CUL5Q93034 780 aa13.45□□□□□ -0.26
SFXN1-210ENST00000513725 MAP7D2Q96T17 732 aa13.45□□□□□ -0.26
SFXN1-210ENST00000513725 TRAIPQ9BWF2 469 aa13.45□□□□□ -0.26
SFXN1-210ENST00000513725 ZNF334Q9HCZ1 680 aaPredicted RBP13.45□□□□□ -0.26
SFXN1-210ENST00000513725 RBM12Q9NTZ6 932 aaKnown RBP13.45□□□□□ -0.26
SFXN1-210ENST00000513725 FNIP2Q9P278 1114 aa13.45□□□□□ -0.26
SFXN1-210ENST00000513725 KANSL3Q9P2N6 904 aa13.45□□□□□ -0.26
SFXN1-210ENST00000513725 APC2O95996 2303 aa13.44□□□□□ -0.26
SFXN1-210ENST00000513725 BCLAF3A2AJT9 711 aaKnown RBP13.44□□□□□ -0.26
SFXN1-210ENST00000513725 CCL16O15467 120 aa13.44□□□□□ -0.26
SFXN1-210ENST00000513725 ANP32CO43423 234 aa13.44□□□□□ -0.26
SFXN1-210ENST00000513725 C22orf31O95567 290 aa13.44□□□□□ -0.26
SFXN1-210ENST00000513725 HOXA9P31269 272 aa13.44□□□□□ -0.26
SFXN1-210ENST00000513725 GRM2Q14416 872 aa13.44□□□□□ -0.26
SFXN1-210ENST00000513725 ZNF423Q2M1K9 1284 aa13.44□□□□□ -0.26
SFXN1-210ENST00000513725 PABPC1LQ4VXU2 614 aaKnown RBP13.44□□□□□ -0.26
SFXN1-210ENST00000513725 DGKKQ5KSL6 1271 aa13.44□□□□□ -0.26
SFXN1-210ENST00000513725 VPS53Q5VIR6 699 aa13.44□□□□□ -0.26
SFXN1-210ENST00000513725 TWF2Q6IBS0 349 aaKnown RBP13.44□□□□□ -0.26
SFXN1-210ENST00000513725 Q6ZS52 159 aa13.44□□□□□ -0.26
SFXN1-210ENST00000513725 MIER1Q8N108 512 aa13.44□□□□□ -0.26
SFXN1-210ENST00000513725 STAG2Q8N3U4 1231 aa13.44□□□□□ -0.26
SFXN1-210ENST00000513725 ING5Q8WYH8 240 aa13.44□□□□□ -0.26
SFXN1-210ENST00000513725 PGBD4Q96DM1 585 aa13.44□□□□□ -0.26
SFXN1-210ENST00000513725 MCRS1Q96EZ8 462 aa13.44□□□□□ -0.26
SFXN1-210ENST00000513725 MSANTD3Q96H12 275 aa13.44□□□□□ -0.26
SFXN1-210ENST00000513725 MBOAT7Q96N66 472 aa13.44□□□□□ -0.26
SFXN1-210ENST00000513725 SCLT1Q96NL6 688 aa13.44□□□□□ -0.26
SFXN1-210ENST00000513725 JADE2Q9NQC1 790 aa13.44□□□□□ -0.26
SFXN1-210ENST00000513725 PRG3Q9Y2Y8 225 aaPredicted RBP13.44□□□□□ -0.26
SFXN1-210ENST00000513725 MRPS23Q9Y3D9 190 aaKnown RBP13.44□□□□□ -0.26
SFXN1-210ENST00000513725 WDR81Q562E7 1941 aa13.43□□□□□ -0.26
SFXN1-210ENST00000513725 CAPN8A6NHC0 703 aa13.43□□□□□ -0.26
SFXN1-210ENST00000513725 BACH1O14867 736 aa13.43□□□□□ -0.26
SFXN1-210ENST00000513725 DARSP14868 501 aaKnown RBP13.43□□□□□ -0.26
SFXN1-210ENST00000513725 FGFR4P22455 802 aa13.43□□□□□ -0.26
SFXN1-210ENST00000513725 TMOD1P28289 359 aa13.43□□□□□ -0.26
SFXN1-210ENST00000513725 KCNC4Q03721 635 aa13.43□□□□□ -0.26
SFXN1-210ENST00000513725 SRSF1Q07955 248 aaKnown RBP eCLIP13.43□□□□□ -0.262e-7■□□□□ 10.3
SFXN1-210ENST00000513725 FAM160B1Q5W0V3 765 aa13.43□□□□□ -0.26
SFXN1-210ENST00000513725 RAB44Q7Z6P3 723 aaPredicted RBP13.43□□□□□ -0.26
SFXN1-210ENST00000513725 GPR65Q8IYL9 337 aa13.43□□□□□ -0.26
SFXN1-210ENST00000513725 RNF168Q8IYW5 571 aaPredicted RBP13.43□□□□□ -0.26
SFXN1-210ENST00000513725 MDM1Q8TC05 714 aa13.43□□□□□ -0.26
SFXN1-210ENST00000513725 SDF4Q9BRK5 362 aa13.43□□□□□ -0.26
SFXN1-210ENST00000513725 LRRCC1Q9C099 1032 aa13.43□□□□□ -0.26
SFXN1-210ENST00000513725 RNF41Q9H4P4 317 aaPredicted RBP13.43□□□□□ -0.26
SFXN1-210ENST00000513725 CHST7Q9NS84 486 aa13.43□□□□□ -0.26
SFXN1-210ENST00000513725 C2orf42Q9NWW7 574 aa13.43□□□□□ -0.26
SFXN1-210ENST00000513725 MARCH5Q9NX47 278 aa13.43□□□□□ -0.26
SFXN1-210ENST00000513725 PCNX2A6NKB5 2137 aa13.43□□□□□ -0.26
SFXN1-210ENST00000513725 MEIS3P2A8K0S8 358 aa13.42□□□□□ -0.26
SFXN1-210ENST00000513725 ZBTB42B2RXF5 422 aa13.42□□□□□ -0.26
SFXN1-210ENST00000513725 CAPN9O14815 690 aa13.42□□□□□ -0.26
SFXN1-210ENST00000513725 FGAP02671 866 aa13.42□□□□□ -0.26
SFXN1-210ENST00000513725 C8AP07357 584 aa13.42□□□□□ -0.26
SFXN1-210ENST00000513725 GDI1P31150 447 aa13.42□□□□□ -0.26
SFXN1-210ENST00000513725 HOXC13P31276 330 aa13.42□□□□□ -0.26
SFXN1-210ENST00000513725 OR1G1P47890 313 aa13.42□□□□□ -0.26
SFXN1-210ENST00000513725 PXNP49023 591 aaPredicted RBP13.42□□□□□ -0.26
SFXN1-210ENST00000513725 RAB27AP51159 221 aa13.42□□□□□ -0.26
SFXN1-210ENST00000513725 CLCN3P51790 818 aa13.42□□□□□ -0.26
SFXN1-210ENST00000513725 MLLT6P55198 1093 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms