RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 TRIM27P14373 513 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 NTF4P34130 210 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 PREPP48147 710 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 ZXDAP98168 799 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 ZNF200P98182 395 aaPredicted RBP5.7□□□□□ -1.5
HTT-211ENST00000513326 HYAL1Q12794 435 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 SMAD2Q15796 467 aaKnown RBP5.7□□□□□ -1.5
HTT-211ENST00000513326 PTGISQ16647 500 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 DUSP28Q4G0W2 176 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 CTR9Q6PD62 1173 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 ANKS3Q6ZW76 656 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 LRRC8DQ7L1W4 858 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 AACSQ86V21 672 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 LSRQ86X29 649 aaPredicted RBP5.7□□□□□ -1.5
HTT-211ENST00000513326 HID1Q8IV36 788 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 FBXL6Q8N531 539 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 PRPF38AQ8NAV1 312 aaKnown RBP5.7□□□□□ -1.5
HTT-211ENST00000513326 CHST13Q8NET6 341 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 OR6J1Q8NGC5 347 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 SSH3Q8TE77 659 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 TMEM40Q8WWA1 233 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 WFDC12Q8WWY7 111 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 ATOH1Q92858 354 aaPredicted RBP5.7□□□□□ -1.5
HTT-211ENST00000513326 ASIC4Q96FT7 647 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 CCDC17Q96LX7 622 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 RAD9AQ99638 391 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 TM9SF2Q99805 663 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 MTG1Q9BT17 334 aaPredicted RBP5.7□□□□□ -1.5
HTT-211ENST00000513326 FSD1Q9BTV5 496 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 ACAD9Q9H845 621 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 FAM105AQ9NUU6 356 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 VPS13AQ96RL7 3174 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 MICAL3Q7RTP6 2002 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 ZBED9Q6R2W3 1325 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 MYH4Q9Y623 1939 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 ZFHX4Q86UP3 3567 aa5.7□□□□□ -1.5
HTT-211ENST00000513326 EP300Q09472 2414 aaPredicted RBP5.69□□□□□ -1.5
HTT-211ENST00000513326 NLRC5Q86WI3 1866 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.69□□□□□ -1.5
HTT-211ENST00000513326 ASB14A6NK59 587 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 SLC22A31A6NKX4 558 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 NFIBO00712 420 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 GAS2O43903 313 aaKnown RBP5.69□□□□□ -1.5
HTT-211ENST00000513326 PRDM1O75626 825 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 CKBP12277 381 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 ALAS1P13196 640 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 NOS3P29474 1203 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 USP11P51784 963 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 YARSP54577 528 aaKnown RBP5.69□□□□□ -1.5
HTT-211ENST00000513326 HTRA4P83105 476 aaPredicted RBP5.69□□□□□ -1.5
HTT-211ENST00000513326 RBM10P98175 930 aaKnown RBP5.69□□□□□ -1.5
HTT-211ENST00000513326 GPM6BQ13491 265 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 TRIM71Q2Q1W2 868 aaKnown RBP5.69□□□□□ -1.5
HTT-211ENST00000513326 UVSSAQ2YD98 709 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 TIGD5Q53EQ6 642 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 SLC6A19Q695T7 634 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 IQSEC1Q6DN90 963 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 NFRKBQ6P4R8 1299 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 CNKSR3Q6P9H4 555 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 NSMFQ6X4W1 530 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 SLC30A10Q6XR72 485 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 DPH6Q7L8W6 267 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 BMP8AQ7Z5Y6 402 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 CERS3Q8IU89 383 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 MCATQ8IVS2 390 aaKnown RBP5.69□□□□□ -1.5
HTT-211ENST00000513326 SMYD4Q8IYR2 804 aaPredicted RBP5.69□□□□□ -1.5
HTT-211ENST00000513326 TAB3Q8N5C8 712 aaPredicted RBP5.69□□□□□ -1.5
HTT-211ENST00000513326 C19orf47Q8N9M1 422 aaKnown RBP5.69□□□□□ -1.5
HTT-211ENST00000513326 MORC4Q8TE76 937 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 KAT2BQ92831 832 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 ACSF2Q96CM8 615 aaPredicted RBP5.69□□□□□ -1.5
HTT-211ENST00000513326 CEP95Q96GE4 821 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 FAM46AQ96IP4 442 aaKnown RBP5.69□□□□□ -1.5
HTT-211ENST00000513326 WDR11Q9BZH6 1224 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 SMOC2Q9H3U7 446 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 NSUN3Q9H649 340 aaKnown RBP5.69□□□□□ -1.5
HTT-211ENST00000513326 IL1RAPL2Q9NP60 686 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 CYP39A1Q9NYL5 469 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 CLIP2Q9UDT6 1046 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 Q9Y3F1 56 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 R3HCC1Q9Y3T6 440 aaKnown RBP5.69□□□□□ -1.5
HTT-211ENST00000513326 SPTBN2O15020 2390 aa5.69□□□□□ -1.5
HTT-211ENST00000513326 TMEM232C9JQI7 657 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 H3BNC9 293 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 STXBP3O00186 592 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 SMAD7O15105 426 aaKnown RBP5.68□□□□□ -1.5
HTT-211ENST00000513326 GRM6O15303 877 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 KLF4O43474 513 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 RNGTTO60942 597 aaKnown RBP5.68□□□□□ -1.5
HTT-211ENST00000513326 AVPR2P30518 371 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 ADD2P35612 726 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 ALDH5A1P51649 535 aaPredicted RBP5.68□□□□□ -1.5
HTT-211ENST00000513326 RARSP54136 660 aaKnown RBP5.68□□□□□ -1.5
HTT-211ENST00000513326 SMAD4Q13485 552 aaKnown RBP5.68□□□□□ -1.5
HTT-211ENST00000513326 BFSP2Q13515 415 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 ZNF618Q5T7W0 954 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 CDCP2Q5VXM1 449 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 OVOS1Q6IE37 1185 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 NLRC3Q7RTR2 1065 aa5.68□□□□□ -1.5
HTT-211ENST00000513326 FRMD5Q7Z6J6 570 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms