RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 EEF1DP3Q658K8 133 aa23.08■■□□□ 1.28
NEIL3-202ENST00000513321 SLC27A1Q6PCB7 646 aa23.08■■□□□ 1.28
NEIL3-202ENST00000513321 NPAS4Q8IUM7 802 aa23.08■■□□□ 1.28
NEIL3-202ENST00000513321 GLIS3Q8NEA6 775 aa23.08■■□□□ 1.28
NEIL3-202ENST00000513321 ZBED2Q9BTP6 218 aa23.08■■□□□ 1.28
NEIL3-202ENST00000513321 EIF2AQ9BY44 585 aaKnown RBP23.08■■□□□ 1.28
NEIL3-202ENST00000513321 LRFN2Q9ULH4 789 aa23.08■■□□□ 1.28
NEIL3-202ENST00000513321 TNFSF13BQ9Y275 285 aa23.08■■□□□ 1.28
NEIL3-202ENST00000513321 ZNF623O75123 536 aa23.07■■□□□ 1.28
NEIL3-202ENST00000513321 STAG3L1P0CL83 205 aa23.07■■□□□ 1.28
NEIL3-202ENST00000513321 SKIP12755 728 aa23.07■■□□□ 1.28
NEIL3-202ENST00000513321 ALCAMQ13740 583 aa23.07■■□□□ 1.28
NEIL3-202ENST00000513321 ZPBP2Q6X784 338 aa23.07■■□□□ 1.28
NEIL3-202ENST00000513321 MAP4K3Q8IVH8 894 aa23.07■■□□□ 1.28
NEIL3-202ENST00000513321 RNF169Q8NCN4 708 aa23.07■■□□□ 1.28
NEIL3-202ENST00000513321 ERCC4Q92889 916 aaPredicted RBP23.07■■□□□ 1.28
NEIL3-202ENST00000513321 CCDC47Q96A33 483 aaKnown RBP23.07■■□□□ 1.28
NEIL3-202ENST00000513321 HVCN1Q96D96 273 aa23.07■■□□□ 1.28
NEIL3-202ENST00000513321 BICD1Q96G01 975 aa23.07■■□□□ 1.28
NEIL3-202ENST00000513321 ELAC1Q9H777 363 aaKnown RBP23.07■■□□□ 1.28
NEIL3-202ENST00000513321 SLC39A2Q9NP94 309 aa23.07■■□□□ 1.28
NEIL3-202ENST00000513321 RNF216Q9NWF9 866 aaPredicted RBP23.07■■□□□ 1.28
NEIL3-202ENST00000513321 TMEM161AQ9NX61 479 aa23.07■■□□□ 1.28
NEIL3-202ENST00000513321 GJB5O95377 273 aa23.06■■□□□ 1.28
NEIL3-202ENST00000513321 NPTXRO95502 500 aa23.06■■□□□ 1.28
NEIL3-202ENST00000513321 EOMESO95936 686 aa23.06■■□□□ 1.28
NEIL3-202ENST00000513321 MCM4P33991 863 aa23.06■■□□□ 1.28
NEIL3-202ENST00000513321 RAB27AP51159 221 aa23.06■■□□□ 1.28
NEIL3-202ENST00000513321 RABGGTBP53611 331 aa23.06■■□□□ 1.28
NEIL3-202ENST00000513321 KCNA1Q09470 495 aa23.06■■□□□ 1.28
NEIL3-202ENST00000513321 PSMD2Q13200 908 aa23.06■■□□□ 1.28
NEIL3-202ENST00000513321 LRIT3Q3SXY7 679 aa23.06■■□□□ 1.28
NEIL3-202ENST00000513321 STXBP4Q6ZWJ1 553 aa23.06■■□□□ 1.28
NEIL3-202ENST00000513321 ADPGKQ9BRR6 497 aa23.06■■□□□ 1.28
NEIL3-202ENST00000513321 TCHPQ9BT92 498 aa23.06■■□□□ 1.28
NEIL3-202ENST00000513321 TRIM6Q9C030 488 aaPredicted RBP23.06■■□□□ 1.28
NEIL3-202ENST00000513321 PTPRHQ9HD43 1115 aa23.06■■□□□ 1.28
NEIL3-202ENST00000513321 PCDHA5Q9Y5H7 936 aa23.06■■□□□ 1.28
NEIL3-202ENST00000513321 PRPF6O94906 941 aaKnown RBP23.05■■□□□ 1.28
NEIL3-202ENST00000513321 SMC2O95347 1197 aa23.05■■□□□ 1.28
NEIL3-202ENST00000513321 STK4Q13043 487 aa23.05■■□□□ 1.28
NEIL3-202ENST00000513321 L1TD1Q5T7N2 865 aaKnown RBP23.05■■□□□ 1.28
NEIL3-202ENST00000513321 MRPL10Q7Z7H8 261 aaKnown RBP23.05■■□□□ 1.28
NEIL3-202ENST00000513321 ZNF598Q86UK7 904 aaKnown RBP23.05■■□□□ 1.28
NEIL3-202ENST00000513321 ZBTB45Q96K62 511 aaPredicted RBP23.05■■□□□ 1.28
NEIL3-202ENST00000513321 ACCSQ96QU6 501 aa23.05■■□□□ 1.28
NEIL3-202ENST00000513321 TTC3P53804 2025 aa23.05■■□□□ 1.28
NEIL3-202ENST00000513321 HNRNPDLO14979 420 aaKnown RBP23.04■■□□□ 1.28
NEIL3-202ENST00000513321 TOM1L1O75674 476 aa23.04■■□□□ 1.28
NEIL3-202ENST00000513321 RHOBTB3O94955 611 aa23.04■■□□□ 1.28
NEIL3-202ENST00000513321 PIGRP01833 764 aa23.04■■□□□ 1.28
NEIL3-202ENST00000513321 ATF7P17544 494 aaPredicted RBP23.04■■□□□ 1.28
NEIL3-202ENST00000513321 LIG4P49917 911 aa23.04■■□□□ 1.28
NEIL3-202ENST00000513321 KCNB1Q14721 858 aa23.04■■□□□ 1.28
NEIL3-202ENST00000513321 EPM2AIP1Q7L775 607 aaPredicted RBP23.04■■□□□ 1.28
NEIL3-202ENST00000513321 SMG8Q8ND04 991 aaKnown RBP23.04■■□□□ 1.28
NEIL3-202ENST00000513321 GPT2Q8TD30 523 aa23.04■■□□□ 1.28
NEIL3-202ENST00000513321 SMARCE1Q969G3 411 aa23.04■■□□□ 1.28
NEIL3-202ENST00000513321 IPPQ9Y573 584 aa23.04■■□□□ 1.28
NEIL3-202ENST00000513321 TLL1O43897 1013 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 PROZP22891 400 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 CAMK4Q16566 473 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 MPZL3Q6UWV2 235 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 ZBTB33Q86T24 672 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 SPATA20Q8TB22 786 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 ZNF507Q8TCN5 953 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 LPPQ93052 612 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 PGBD4Q96DM1 585 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 GSDMAQ96QA5 445 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 RAD9AQ99638 391 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 IKZF4Q9H2S9 585 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 EXOC7Q9UPT5 735 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 HES2Q9Y543 173 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 TRIOBPQ9H2D6 2365 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 ANKRD63C9JTQ0 380 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 ABLIM1O14639 778 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 EIF3DO15371 548 aaKnown RBP eCLIP23.03■■□□□ 1.28
NEIL3-202ENST00000513321 CLDN3O15551 220 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 DGKIO75912 1065 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 FGFR1P11362 822 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 PBX2P40425 430 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 ZNF568Q3ZCX4 644 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 APBB1IPQ7Z5R6 666 aaPredicted RBP23.03■■□□□ 1.28
NEIL3-202ENST00000513321 SYCP3Q8IZU3 236 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 SCFD1Q8WVM8 642 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 YME1L1Q96TA2 773 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 CDT1Q9H211 546 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 RNF39Q9H2S5 420 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 NXF3Q9H4D5 531 aaKnown RBP23.03■■□□□ 1.28
NEIL3-202ENST00000513321 ANKFY1Q9P2R3 1169 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 INSL6Q9Y581 213 aa23.03■■□□□ 1.28
NEIL3-202ENST00000513321 MEIS3P2A8K0S8 358 aa23.02■■□□□ 1.28
NEIL3-202ENST00000513321 MYOGP15173 224 aa23.02■■□□□ 1.28
NEIL3-202ENST00000513321 HOXD13P35453 343 aa23.02■■□□□ 1.28
NEIL3-202ENST00000513321 GATMP50440 423 aa23.02■■□□□ 1.28
NEIL3-202ENST00000513321 HTRA4P83105 476 aaPredicted RBP23.02■■□□□ 1.28
NEIL3-202ENST00000513321 SMAD3P84022 425 aaKnown RBP23.02■■□□□ 1.28
NEIL3-202ENST00000513321 DCAF4L1Q3SXM0 396 aa23.02■■□□□ 1.28
NEIL3-202ENST00000513321 SLC39A4Q6P5W5 647 aa23.02■■□□□ 1.28
NEIL3-202ENST00000513321 KIAA0895Q8NCT3 520 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms