RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 RHPN2Q8IUC4 686 aa15.62■□□□□ 0.09
SPCS3-204ENST00000513139 RNF168Q8IYW5 571 aaPredicted RBP15.62■□□□□ 0.09
SPCS3-204ENST00000513139 SLC5A5Q92911 643 aa15.62■□□□□ 0.09
SPCS3-204ENST00000513139 AGPAT5Q9NUQ2 364 aa15.62■□□□□ 0.09
SPCS3-204ENST00000513139 ZDHHC7Q9NXF8 308 aa15.62■□□□□ 0.09
SPCS3-204ENST00000513139 SUCLA2Q9P2R7 463 aaPredicted RBP15.62■□□□□ 0.09
SPCS3-204ENST00000513139 SEPT9Q9UHD8 586 aaPredicted RBP15.62■□□□□ 0.09
SPCS3-204ENST00000513139 FBXO4Q9UKT5 387 aa15.62■□□□□ 0.09
SPCS3-204ENST00000513139 CHD6Q8TD26 2715 aa15.61■□□□□ 0.09
SPCS3-204ENST00000513139 CFAP47Q6ZTR5 3102 aa15.61■□□□□ 0.09
SPCS3-204ENST00000513139 GOLGA8AA7E2F4 631 aa15.61■□□□□ 0.09
SPCS3-204ENST00000513139 GOLGA8BA8MQT2 603 aa15.61■□□□□ 0.09
SPCS3-204ENST00000513139 ADAMTS3O15072 1205 aa15.61■□□□□ 0.09
SPCS3-204ENST00000513139 MAFO75444 373 aaPredicted RBP15.61■□□□□ 0.09
SPCS3-204ENST00000513139 RFPL2O75678 378 aa15.61■□□□□ 0.09
SPCS3-204ENST00000513139 GLULP15104 373 aa15.61■□□□□ 0.09
SPCS3-204ENST00000513139 CDC27P30260 824 aa15.61■□□□□ 0.09
SPCS3-204ENST00000513139 GLUD2P49448 558 aa15.61■□□□□ 0.09
SPCS3-204ENST00000513139 USP11P51784 963 aa15.61■□□□□ 0.09
SPCS3-204ENST00000513139 LRCH2Q5VUJ6 765 aa15.61■□□□□ 0.09
SPCS3-204ENST00000513139 GPR65Q8IYL9 337 aa15.61■□□□□ 0.09
SPCS3-204ENST00000513139 MAML2Q8IZL2 1156 aaPredicted RBP15.61■□□□□ 0.09
SPCS3-204ENST00000513139 BICD2Q8TD16 824 aa15.61■□□□□ 0.09
SPCS3-204ENST00000513139 JPH2Q9BR39 696 aaPredicted RBP15.61■□□□□ 0.09
SPCS3-204ENST00000513139 TEKT3Q9BXF9 490 aa15.61■□□□□ 0.09
SPCS3-204ENST00000513139 NT5C3AQ9H0P0 336 aa15.61■□□□□ 0.09
SPCS3-204ENST00000513139 PIDD1Q9HB75 910 aa15.61■□□□□ 0.09
SPCS3-204ENST00000513139 IFT122Q9HBG6 1241 aa15.61■□□□□ 0.09
SPCS3-204ENST00000513139 UBN1Q9NPG3 1134 aa15.61■□□□□ 0.09
SPCS3-204ENST00000513139 CCDC196A0A1B0GTZ2 297 aa15.6■□□□□ 0.09
SPCS3-204ENST00000513139 STBD1O95210 358 aa15.6■□□□□ 0.09
SPCS3-204ENST00000513139 AFF1P51825 1210 aaKnown RBP15.6■□□□□ 0.09
SPCS3-204ENST00000513139 DSG1Q02413 1049 aa15.6■□□□□ 0.09
SPCS3-204ENST00000513139 VARS2Q5ST30 1063 aaKnown RBP15.6■□□□□ 0.09
SPCS3-204ENST00000513139 RNF20Q5VTR2 975 aa15.6■□□□□ 0.09
SPCS3-204ENST00000513139 DHX32Q7L7V1 743 aaKnown RBP15.6■□□□□ 0.09
SPCS3-204ENST00000513139 OSBPL6Q9BZF3 934 aa15.6■□□□□ 0.09
SPCS3-204ENST00000513139 UNC45AQ9H3U1 944 aa15.6■□□□□ 0.09
SPCS3-204ENST00000513139 MARCH5Q9NX47 278 aa15.6■□□□□ 0.09
SPCS3-204ENST00000513139 POTEMA6NI47 508 aa15.59■□□□□ 0.09
SPCS3-204ENST00000513139 CHMP2AO43633 222 aa15.59■□□□□ 0.09
SPCS3-204ENST00000513139 PSMD10O75832 226 aa15.59■□□□□ 0.09
SPCS3-204ENST00000513139 POMCP01189 267 aa15.59■□□□□ 0.09
SPCS3-204ENST00000513139 NCLP19338 710 aaKnown RBP15.59■□□□□ 0.09
SPCS3-204ENST00000513139 MAGEA9P43362 315 aa15.59■□□□□ 0.09
SPCS3-204ENST00000513139 PDAP1Q13442 181 aaKnown RBP15.59■□□□□ 0.09
SPCS3-204ENST00000513139 POTEGQ6S5H5 508 aa15.59■□□□□ 0.09
SPCS3-204ENST00000513139 TAS1R1Q7RTX1 841 aa15.59■□□□□ 0.09
SPCS3-204ENST00000513139 MIER3Q7Z3K6 550 aa15.59■□□□□ 0.09
SPCS3-204ENST00000513139 SRGAP1Q7Z6B7 1085 aa15.59■□□□□ 0.09
SPCS3-204ENST00000513139 KSR1Q8IVT5 923 aa15.59■□□□□ 0.09
SPCS3-204ENST00000513139 COLGALT2Q8IYK4 626 aa15.59■□□□□ 0.09
SPCS3-204ENST00000513139 CNNM3Q8NE01 707 aa15.59■□□□□ 0.09
SPCS3-204ENST00000513139 PHKBQ93100 1093 aa15.59■□□□□ 0.09
SPCS3-204ENST00000513139 KIF12Q96FN5 646 aa15.59■□□□□ 0.09
SPCS3-204ENST00000513139 NLRP4Q96MN2 994 aa15.59■□□□□ 0.09
SPCS3-204ENST00000513139 DDX23Q9BUQ8 820 aaKnown RBP15.59■□□□□ 0.09
SPCS3-204ENST00000513139 BCO2Q9BYV7 579 aa15.59■□□□□ 0.09
SPCS3-204ENST00000513139 PRKD2Q9BZL6 878 aa15.59■□□□□ 0.09
SPCS3-204ENST00000513139 FOXQ1Q9C009 403 aa15.59■□□□□ 0.09
SPCS3-204ENST00000513139 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.59■□□□□ 0.09
SPCS3-204ENST00000513139 CHST7Q9NS84 486 aa15.59■□□□□ 0.09
SPCS3-204ENST00000513139 NCDNQ9UBB6 729 aa15.59■□□□□ 0.09
SPCS3-204ENST00000513139 PCDHGA2Q9Y5H1 932 aa15.59■□□□□ 0.09
SPCS3-204ENST00000513139 NUMBLQ9Y6R0 609 aa15.59■□□□□ 0.09
SPCS3-204ENST00000513139 RALGAPA1Q6GYQ0 2036 aa15.58■□□□□ 0.09
SPCS3-204ENST00000513139 KLF18A0A0U1RQI7 1052 aa15.58■□□□□ 0.08
SPCS3-204ENST00000513139 KANSL1LA0AUZ9 987 aa15.58■□□□□ 0.08
SPCS3-204ENST00000513139 PRR5-ARHGAP8B1AHC4 643 aa15.58■□□□□ 0.08
SPCS3-204ENST00000513139 LAMTOR5O43504 91 aa15.58■□□□□ 0.08
SPCS3-204ENST00000513139 EDIL3O43854 480 aa15.58■□□□□ 0.08
SPCS3-204ENST00000513139 GAS2O43903 313 aaKnown RBP15.58■□□□□ 0.08
SPCS3-204ENST00000513139 HOXA11P31270 313 aaPredicted RBP15.58■□□□□ 0.08
SPCS3-204ENST00000513139 ARHGAP8P85298 464 aa15.58■□□□□ 0.08
SPCS3-204ENST00000513139 PRKCQQ04759 706 aa15.58■□□□□ 0.08
SPCS3-204ENST00000513139 DSC1Q08554 894 aa15.58■□□□□ 0.08
SPCS3-204ENST00000513139 LILRA6Q6PI73 481 aa15.58■□□□□ 0.08
SPCS3-204ENST00000513139 B3GNT9Q6UX72 402 aa15.58■□□□□ 0.08
SPCS3-204ENST00000513139 GET4Q7L5D6 327 aaPredicted RBP15.58■□□□□ 0.08
SPCS3-204ENST00000513139 EXOC8Q8IYI6 725 aa15.58■□□□□ 0.08
SPCS3-204ENST00000513139 SECISBP2LQ93073 1101 aaKnown RBP15.58■□□□□ 0.08
SPCS3-204ENST00000513139 ESYT1Q9BSJ8 1104 aa15.58■□□□□ 0.08
SPCS3-204ENST00000513139 FNIP2Q9P278 1114 aa15.58■□□□□ 0.08
SPCS3-204ENST00000513139 PRG3Q9Y2Y8 225 aaPredicted RBP15.58■□□□□ 0.08
SPCS3-204ENST00000513139 COL4A3BPQ9Y5P4 624 aa15.58■□□□□ 0.08
SPCS3-204ENST00000513139 USP24Q9UPU5 2620 aa15.58■□□□□ 0.08
SPCS3-204ENST00000513139 ARID2Q68CP9 1835 aa15.57■□□□□ 0.08
SPCS3-204ENST00000513139 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.57■□□□□ 0.08
SPCS3-204ENST00000513139 TMEM150BA6NC51 233 aa15.57■□□□□ 0.08
SPCS3-204ENST00000513139 DDX11L8A8MPP1 907 aa15.57■□□□□ 0.08
SPCS3-204ENST00000513139 HAX1O00165 279 aa15.57■□□□□ 0.08
SPCS3-204ENST00000513139 PRPF3O43395 683 aaKnown RBP15.57■□□□□ 0.08
SPCS3-204ENST00000513139 TGM5O43548 720 aa15.57■□□□□ 0.08
SPCS3-204ENST00000513139 NR1I2O75469 434 aa15.57■□□□□ 0.08
SPCS3-204ENST00000513139 SPATA31D3P0C874 917 aa15.57■□□□□ 0.08
SPCS3-204ENST00000513139 ADD1P35611 737 aaKnown RBP15.57■□□□□ 0.08
SPCS3-204ENST00000513139 OR1G1P47890 313 aa15.57■□□□□ 0.08
SPCS3-204ENST00000513139 ATXN1P54253 815 aaKnown RBP15.57■□□□□ 0.08
SPCS3-204ENST00000513139 CREMQ03060 361 aa15.57■□□□□ 0.08
SPCS3-204ENST00000513139 UBXN11Q5T124 520 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms