RNA–Protein interactions for RNA: ENST00000512925.1

PFDN1-205, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 900 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-205ENST00000512925 CHD8Q9HCK8 2581 aa11.68□□□□□ -0.54
PFDN1-205ENST00000512925 MSH4O15457 936 aa11.68□□□□□ -0.54
PFDN1-205ENST00000512925 KINO60870 393 aaKnown RBP11.68□□□□□ -0.54
PFDN1-205ENST00000512925 GLUD1P00367 558 aa11.68□□□□□ -0.54
PFDN1-205ENST00000512925 URODP06132 367 aa11.68□□□□□ -0.54
PFDN1-205ENST00000512925 ADH1AP07327 375 aa11.68□□□□□ -0.54
PFDN1-205ENST00000512925 SPATA31D3P0C874 917 aa11.68□□□□□ -0.54
PFDN1-205ENST00000512925 CDC27P30260 824 aa11.68□□□□□ -0.54
PFDN1-205ENST00000512925 GPC5P78333 572 aa11.68□□□□□ -0.54
PFDN1-205ENST00000512925 UBXN11Q5T124 520 aa11.68□□□□□ -0.54
PFDN1-205ENST00000512925 TMEM92Q6UXU6 159 aa11.68□□□□□ -0.54
PFDN1-205ENST00000512925 SPATA31D4Q6ZUB0 917 aa11.68□□□□□ -0.54
PFDN1-205ENST00000512925 ZNF410Q86VK4 478 aa11.68□□□□□ -0.54
PFDN1-205ENST00000512925 KSR1Q8IVT5 923 aa11.68□□□□□ -0.54
PFDN1-205ENST00000512925 COLGALT2Q8IYK4 626 aa11.68□□□□□ -0.54
PFDN1-205ENST00000512925 HDAC7Q8WUI4 952 aa11.68□□□□□ -0.54
PFDN1-205ENST00000512925 PGBD4Q96DM1 585 aa11.68□□□□□ -0.54
PFDN1-205ENST00000512925 BORCS6Q96GS4 357 aa11.68□□□□□ -0.54
PFDN1-205ENST00000512925 SH2D3AQ9BRG2 576 aa11.68□□□□□ -0.54
PFDN1-205ENST00000512925 DDX23Q9BUQ8 820 aaKnown RBP11.68□□□□□ -0.54
PFDN1-205ENST00000512925 INO80BQ9C086 356 aaPredicted RBP11.68□□□□□ -0.54
PFDN1-205ENST00000512925 ZMYND12Q9H0C1 365 aa11.68□□□□□ -0.54
PFDN1-205ENST00000512925 IFT122Q9HBG6 1241 aa11.68□□□□□ -0.54
PFDN1-205ENST00000512925 MTF2Q9Y483 593 aaPredicted RBP11.68□□□□□ -0.54
PFDN1-205ENST00000512925 MYH9P35579 1960 aaKnown RBP11.68□□□□□ -0.54
PFDN1-205ENST00000512925 DOCK8Q8NF50 2099 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 ESYT2A0FGR8 921 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 SPTLC1O15269 473 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 MAFO75444 373 aaPredicted RBP11.67□□□□□ -0.54
PFDN1-205ENST00000512925 C1RP00736 705 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 POMCP01189 267 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 HOXA11P31270 313 aaPredicted RBP11.67□□□□□ -0.54
PFDN1-205ENST00000512925 EXOSC10Q01780 885 aaKnown RBP11.67□□□□□ -0.54
PFDN1-205ENST00000512925 DSG1Q02413 1049 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 RTN1Q16799 776 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 PFKFB3Q16875 520 aaPredicted RBP11.67□□□□□ -0.54
PFDN1-205ENST00000512925 MTERF2Q49AM1 385 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 ERICH6BQ5W0A0 696 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 CREB3L3Q68CJ9 461 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 LILRA6Q6PI73 481 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 SYNE3Q6ZMZ3 975 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 CATSPER4Q7RTX7 472 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 RHPN2Q8IUC4 686 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 ZBTB44Q8NCP5 570 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 URGCPQ8TCY9 931 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 NELL1Q92832 810 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 FGF14Q92915 247 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 GJA10Q969M2 543 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 PRKD2Q9BZL6 878 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 UNC45AQ9H3U1 944 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 RSAD1Q9HA92 442 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 CHST7Q9NS84 486 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 AGPAT5Q9NUQ2 364 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 KANSL3Q9P2N6 904 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 SUCLA2Q9P2R7 463 aaPredicted RBP11.67□□□□□ -0.54
PFDN1-205ENST00000512925 DPP7Q9UHL4 492 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 TCEAL9Q9UHQ7 104 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 FBXO4Q9UKT5 387 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 SSX2IPQ9Y2D8 614 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 COL4A3Q01955 1670 aa11.67□□□□□ -0.54
PFDN1-205ENST00000512925 MAP1BP46821 2468 aaKnown RBP11.66□□□□□ -0.54
PFDN1-205ENST00000512925 KANSL1LA0AUZ9 987 aa11.66□□□□□ -0.54
PFDN1-205ENST00000512925 F8W810 466 aa11.66□□□□□ -0.54
PFDN1-205ENST00000512925 TGM5O43548 720 aa11.66□□□□□ -0.54
PFDN1-205ENST00000512925 GAS2O43903 313 aaKnown RBP11.66□□□□□ -0.54
PFDN1-205ENST00000512925 LILRB5O75023 590 aa11.66□□□□□ -0.54
PFDN1-205ENST00000512925 PPP1R37O75864 691 aa11.66□□□□□ -0.54
PFDN1-205ENST00000512925 SDHBP21912 280 aa11.66□□□□□ -0.54
PFDN1-205ENST00000512925 GLUD2P49448 558 aa11.66□□□□□ -0.54
PFDN1-205ENST00000512925 JAK3P52333 1124 aa11.66□□□□□ -0.54
PFDN1-205ENST00000512925 SNW1Q13573 536 aaKnown RBP11.66□□□□□ -0.54
PFDN1-205ENST00000512925 XKR3Q5GH77 459 aa11.66□□□□□ -0.54
PFDN1-205ENST00000512925 PARM1Q6UWI2 310 aa11.66□□□□□ -0.54
PFDN1-205ENST00000512925 B3GNT9Q6UX72 402 aa11.66□□□□□ -0.54
PFDN1-205ENST00000512925 GET4Q7L5D6 327 aaPredicted RBP11.66□□□□□ -0.54
PFDN1-205ENST00000512925 PALB2Q86YC2 1186 aa11.66□□□□□ -0.54
PFDN1-205ENST00000512925 GPR161Q8N6U8 529 aaKnown RBP11.66□□□□□ -0.54
PFDN1-205ENST00000512925 SLC5A5Q92911 643 aa11.66□□□□□ -0.54
PFDN1-205ENST00000512925 FAM193BQ96PV7 902 aaPredicted RBP11.66□□□□□ -0.54
PFDN1-205ENST00000512925 RIT2Q99578 217 aa11.66□□□□□ -0.54
PFDN1-205ENST00000512925 PLEKHA4Q9H4M7 779 aa11.66□□□□□ -0.54
PFDN1-205ENST00000512925 MINDY3Q9H8M7 445 aa11.66□□□□□ -0.54
PFDN1-205ENST00000512925 MIOSQ9NXC5 875 aa11.66□□□□□ -0.54
PFDN1-205ENST00000512925 ZDHHC7Q9NXF8 308 aa11.66□□□□□ -0.54
PFDN1-205ENST00000512925 NCDNQ9UBB6 729 aa11.66□□□□□ -0.54
PFDN1-205ENST00000512925 SEPT9Q9UHD8 586 aaPredicted RBP11.66□□□□□ -0.54
PFDN1-205ENST00000512925 PRG3Q9Y2Y8 225 aaPredicted RBP11.66□□□□□ -0.54
PFDN1-205ENST00000512925 PCDHGA2Q9Y5H1 932 aa11.66□□□□□ -0.54
PFDN1-205ENST00000512925 USP24Q9UPU5 2620 aa11.66□□□□□ -0.54
PFDN1-205ENST00000512925 CNTNAP2Q9UHC6 1331 aa11.65□□□□□ -0.54
PFDN1-205ENST00000512925 DCDC2BA2VCK2 349 aa11.65□□□□□ -0.54
PFDN1-205ENST00000512925 PRR5-ARHGAP8B1AHC4 643 aa11.65□□□□□ -0.54
PFDN1-205ENST00000512925 ZBTB43O43298 467 aa11.65□□□□□ -0.54
PFDN1-205ENST00000512925 LAMTOR5O43504 91 aa11.65□□□□□ -0.54
PFDN1-205ENST00000512925 CHMP2AO43633 222 aa11.65□□□□□ -0.54
PFDN1-205ENST00000512925 PSMD10O75832 226 aa11.65□□□□□ -0.54
PFDN1-205ENST00000512925 SFNP31947 248 aa11.65□□□□□ -0.54
PFDN1-205ENST00000512925 ADD1P35611 737 aaKnown RBP11.65□□□□□ -0.54
PFDN1-205ENST00000512925 OR1G1P47890 313 aa11.65□□□□□ -0.54
PFDN1-205ENST00000512925 DNM2P50570 870 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms