RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 ADRM1Q16186 407 aa7.17□□□□□ -1.26
CHD1-209ENST00000512844 C19orf54Q5BKX5 351 aa7.17□□□□□ -1.26
CHD1-209ENST00000512844 KCNK18Q7Z418 384 aa7.17□□□□□ -1.26
CHD1-209ENST00000512844 GSPT2Q8IYD1 628 aaKnown RBP7.17□□□□□ -1.26
CHD1-209ENST00000512844 DNERQ8NFT8 737 aa7.17□□□□□ -1.26
CHD1-209ENST00000512844 TSPEARQ8WU66 669 aa7.17□□□□□ -1.26
CHD1-209ENST00000512844 GPR20Q99678 358 aa7.17□□□□□ -1.26
CHD1-209ENST00000512844 TRIM8Q9BZR9 551 aa7.17□□□□□ -1.26
CHD1-209ENST00000512844 KLC2Q9H0B6 622 aa7.17□□□□□ -1.26
CHD1-209ENST00000512844 CCDC8Q9H0W5 538 aaPredicted RBP7.17□□□□□ -1.26
CHD1-209ENST00000512844 AGO3Q9H9G7 860 aaKnown RBP7.17□□□□□ -1.26
CHD1-209ENST00000512844 DNM3Q9UQ16 869 aa7.17□□□□□ -1.26
CHD1-209ENST00000512844 SPEF1Q9Y4P9 236 aa7.17□□□□□ -1.26
CHD1-209ENST00000512844 WASHC2CQ9Y4E1 1318 aa7.17□□□□□ -1.26
CHD1-209ENST00000512844 CASRP41180 1078 aa7.16□□□□□ -1.26
CHD1-209ENST00000512844 SLC16A1P53985 500 aa7.16□□□□□ -1.26
CHD1-209ENST00000512844 FOXL1Q12952 345 aa7.16□□□□□ -1.26
CHD1-209ENST00000512844 MALLQ13021 153 aa7.16□□□□□ -1.26
CHD1-209ENST00000512844 CRHR2Q13324 411 aa7.16□□□□□ -1.26
CHD1-209ENST00000512844 ELAVL1Q15717 326 aaKnown RBP7.16□□□□□ -1.26
CHD1-209ENST00000512844 PTPN21Q16825 1174 aa7.16□□□□□ -1.26
CHD1-209ENST00000512844 C1orf162Q8NEQ5 155 aaPredicted RBP7.16□□□□□ -1.26
CHD1-209ENST00000512844 GPR156Q8NFN8 814 aa7.16□□□□□ -1.26
CHD1-209ENST00000512844 RIN2Q8WYP3 895 aaPredicted RBP7.16□□□□□ -1.26
CHD1-209ENST00000512844 IL17RAQ96F46 866 aa7.16□□□□□ -1.26
CHD1-209ENST00000512844 BORCS6Q96GS4 357 aa7.16□□□□□ -1.26
CHD1-209ENST00000512844 FAXDC2Q96IV6 333 aa7.16□□□□□ -1.26
CHD1-209ENST00000512844 RBM12Q9NTZ6 932 aaKnown RBP7.16□□□□□ -1.26
CHD1-209ENST00000512844 GASTP01350 101 aa7.15□□□□□ -1.26
CHD1-209ENST00000512844 AGXTP21549 392 aa7.15□□□□□ -1.26
CHD1-209ENST00000512844 ADSLP30566 484 aaPredicted RBP7.15□□□□□ -1.26
CHD1-209ENST00000512844 MTNR1BP49286 362 aa7.15□□□□□ -1.26
CHD1-209ENST00000512844 DUSP8Q13202 625 aa7.15□□□□□ -1.26
CHD1-209ENST00000512844 PALM2Q8IXS6 379 aa7.15□□□□□ -1.26
CHD1-209ENST00000512844 MSL3Q8N5Y2 521 aaKnown RBP7.15□□□□□ -1.26
CHD1-209ENST00000512844 FUBP3Q96I24 572 aaKnown RBP eCLIP7.15□□□□□ -1.26
CHD1-209ENST00000512844 ZNF512Q96ME7 567 aaPredicted RBP7.15□□□□□ -1.26
CHD1-209ENST00000512844 TYW1Q9NV66 732 aaKnown RBP7.15□□□□□ -1.26
CHD1-209ENST00000512844 PCDHGA2Q9Y5H1 932 aa7.15□□□□□ -1.26
CHD1-209ENST00000512844 NCANO14594 1321 aa7.15□□□□□ -1.26
CHD1-209ENST00000512844 FAM171A2A8MVW0 826 aa7.14□□□□□ -1.27
CHD1-209ENST00000512844 TMEM127O75204 238 aa7.14□□□□□ -1.27
CHD1-209ENST00000512844 SNUPNO95149 360 aaKnown RBP7.14□□□□□ -1.27
CHD1-209ENST00000512844 ADRB1P08588 477 aa7.14□□□□□ -1.27
CHD1-209ENST00000512844 HSP90B1P14625 803 aaKnown RBP7.14□□□□□ -1.27
CHD1-209ENST00000512844 HIBADHP31937 336 aaKnown RBP7.14□□□□□ -1.27
CHD1-209ENST00000512844 GZMKP49863 264 aa7.14□□□□□ -1.27
CHD1-209ENST00000512844 ADAM8P78325 824 aa7.14□□□□□ -1.27
CHD1-209ENST00000512844 ADAM17P78536 824 aa7.14□□□□□ -1.27
CHD1-209ENST00000512844 EXOSC10Q01780 885 aaKnown RBP7.14□□□□□ -1.27
CHD1-209ENST00000512844 NOMO1Q15155 1222 aa7.14□□□□□ -1.27
CHD1-209ENST00000512844 BRDTQ58F21 947 aaPredicted RBP7.14□□□□□ -1.27
CHD1-209ENST00000512844 LCE4AQ5TA78 99 aa7.14□□□□□ -1.27
CHD1-209ENST00000512844 EFCAB2Q5VUJ9 269 aa7.14□□□□□ -1.27
CHD1-209ENST00000512844 ABHD15Q6UXT9 468 aa7.14□□□□□ -1.27
CHD1-209ENST00000512844 ZBTB46Q86UZ6 589 aa7.14□□□□□ -1.27
CHD1-209ENST00000512844 THEMISQ8N1K5 641 aaPredicted RBP7.14□□□□□ -1.27
CHD1-209ENST00000512844 PPM1NQ8N819 430 aa7.14□□□□□ -1.27
CHD1-209ENST00000512844 MIEF2Q96C03 454 aa7.14□□□□□ -1.27
CHD1-209ENST00000512844 CD248Q9HCU0 757 aa7.14□□□□□ -1.27
CHD1-209ENST00000512844 GPRC5DQ9NZD1 345 aa7.14□□□□□ -1.27
CHD1-209ENST00000512844 GABRDO14764 452 aa7.13□□□□□ -1.27
CHD1-209ENST00000512844 ITGA10O75578 1167 aa7.13□□□□□ -1.27
CHD1-209ENST00000512844 ENDOD1O94919 500 aa7.13□□□□□ -1.27
CHD1-209ENST00000512844 RBP3P10745 1247 aa7.13□□□□□ -1.27
CHD1-209ENST00000512844 GSPT1P15170 499 aaKnown RBP7.13□□□□□ -1.27
CHD1-209ENST00000512844 ZNF20P17024 532 aa7.13□□□□□ -1.27
CHD1-209ENST00000512844 CRHR1P34998 444 aa7.13□□□□□ -1.27
CHD1-209ENST00000512844 APBA1Q02410 837 aa7.13□□□□□ -1.27
CHD1-209ENST00000512844 CBARPQ8N350 705 aaPredicted RBP7.13□□□□□ -1.27
CHD1-209ENST00000512844 EDAQ92838 391 aa7.13□□□□□ -1.27
CHD1-209ENST00000512844 SLC2A13Q96QE2 648 aa7.13□□□□□ -1.27
CHD1-209ENST00000512844 GIT1Q9Y2X7 761 aa7.13□□□□□ -1.27
CHD1-209ENST00000512844 SH3BP1Q9Y3L3 701 aa7.13□□□□□ -1.27
CHD1-209ENST00000512844 PTPN7P35236 360 aa7.12□□□□□ -1.27
CHD1-209ENST00000512844 CNGB1Q14028 1251 aaPredicted RBP7.12□□□□□ -1.27
CHD1-209ENST00000512844 INAVAQ3KP66 663 aa7.12□□□□□ -1.27
CHD1-209ENST00000512844 MIGA2Q7L4E1 593 aa7.12□□□□□ -1.27
CHD1-209ENST00000512844 APBB1IPQ7Z5R6 666 aaPredicted RBP7.12□□□□□ -1.27
CHD1-209ENST00000512844 ZNF808Q8N4W9 903 aaPredicted RBP7.12□□□□□ -1.27
CHD1-209ENST00000512844 MB21D1Q8N884 522 aa7.12□□□□□ -1.27
CHD1-209ENST00000512844 CPPED1Q9BRF8 314 aaPredicted RBP7.12□□□□□ -1.27
CHD1-209ENST00000512844 ASPSCR1Q9BZE9 553 aa7.12□□□□□ -1.27
CHD1-209ENST00000512844 ZNF277Q9NRM2 450 aaPredicted RBP7.12□□□□□ -1.27
CHD1-209ENST00000512844 CLCA2Q9UQC9 943 aa7.12□□□□□ -1.27
CHD1-209ENST00000512844 HOXA3O43365 443 aaPredicted RBP7.11□□□□□ -1.27
CHD1-209ENST00000512844 NDUFS2O75306 463 aa7.11□□□□□ -1.27
CHD1-209ENST00000512844 MCAMP43121 646 aa7.11□□□□□ -1.27
CHD1-209ENST00000512844 KRT85P78386 507 aa7.11□□□□□ -1.27
CHD1-209ENST00000512844 MRPL49Q13405 166 aaKnown RBP7.11□□□□□ -1.27
CHD1-209ENST00000512844 MST1LQ2TV78 715 aa7.11□□□□□ -1.27
CHD1-209ENST00000512844 FAM83AQ86UY5 434 aa7.11□□□□□ -1.27
CHD1-209ENST00000512844 ANKRD13AQ8IZ07 590 aa7.11□□□□□ -1.27
CHD1-209ENST00000512844 MDM1Q8TC05 714 aa7.11□□□□□ -1.27
CHD1-209ENST00000512844 ST8SIA2Q92186 375 aa7.11□□□□□ -1.27
CHD1-209ENST00000512844 C7orf25Q9BPX7 421 aa7.11□□□□□ -1.27
CHD1-209ENST00000512844 SENP6Q9GZR1 1112 aaPredicted RBP7.11□□□□□ -1.27
CHD1-209ENST00000512844 MANSC1Q9H8J5 431 aa7.11□□□□□ -1.27
CHD1-209ENST00000512844 BCO1Q9HAY6 547 aa7.11□□□□□ -1.27
CHD1-209ENST00000512844 DMRT3Q9NQL9 472 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms