RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 EMC2Q15006 297 aa14□□□□□ -0.17
VEGFA-216ENST00000512683 XKR9Q5GH70 373 aa14□□□□□ -0.17
VEGFA-216ENST00000512683 BCL7CQ8WUZ0 217 aaPredicted RBP14□□□□□ -0.17
VEGFA-216ENST00000512683 AUTS2Q8WXX7 1259 aa14□□□□□ -0.17
VEGFA-216ENST00000512683 STAMQ92783 540 aa14□□□□□ -0.17
VEGFA-216ENST00000512683 RPS6KC1Q96S38 1066 aa14□□□□□ -0.17
VEGFA-216ENST00000512683 MTRQ99707 1265 aa14□□□□□ -0.17
VEGFA-216ENST00000512683 GBP3Q9H0R5 595 aa14□□□□□ -0.17
VEGFA-216ENST00000512683 PLEKHA4Q9H4M7 779 aa14□□□□□ -0.17
VEGFA-216ENST00000512683 MINDY3Q9H8M7 445 aa14□□□□□ -0.17
VEGFA-216ENST00000512683 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14□□□□□ -0.17
VEGFA-216ENST00000512683 PCDHA12Q9UN75 941 aa14□□□□□ -0.17
VEGFA-216ENST00000512683 ZMYM2Q9UBW7 1377 aa13.99□□□□□ -0.17
VEGFA-216ENST00000512683 SPDYE4A6NLX3 237 aa13.99□□□□□ -0.17
VEGFA-216ENST00000512683 GFRA3O60609 400 aa13.99□□□□□ -0.17
VEGFA-216ENST00000512683 LARGE1O95461 756 aa13.99□□□□□ -0.17
VEGFA-216ENST00000512683 EFEMP2O95967 443 aa13.99□□□□□ -0.17
VEGFA-216ENST00000512683 FDPSP14324 419 aaKnown RBP13.99□□□□□ -0.17
VEGFA-216ENST00000512683 DSC1Q08554 894 aa13.99□□□□□ -0.17
VEGFA-216ENST00000512683 ME3Q16798 604 aa13.99□□□□□ -0.17
VEGFA-216ENST00000512683 KIAA0319Q5VV43 1072 aa13.99□□□□□ -0.17
VEGFA-216ENST00000512683 TMC5Q6UXY8 1006 aa13.99□□□□□ -0.17
VEGFA-216ENST00000512683 PIK3AP1Q6ZUJ8 805 aa13.99□□□□□ -0.17
VEGFA-216ENST00000512683 COLGALT2Q8IYK4 626 aa13.99□□□□□ -0.17
VEGFA-216ENST00000512683 RNF168Q8IYW5 571 aaPredicted RBP13.99□□□□□ -0.17
VEGFA-216ENST00000512683 ZNF579Q8NAF0 562 aaKnown RBP13.99□□□□□ -0.17
VEGFA-216ENST00000512683 SMG8Q8ND04 991 aaKnown RBP13.99□□□□□ -0.17
VEGFA-216ENST00000512683 RTP3Q9BQQ7 232 aa13.99□□□□□ -0.17
VEGFA-216ENST00000512683 HERC2P3Q9BVR0 1158 aa13.99□□□□□ -0.17
VEGFA-216ENST00000512683 VN1R3Q9BXE9 311 aa13.99□□□□□ -0.17
VEGFA-216ENST00000512683 CSRNP2Q9H175 543 aa13.99□□□□□ -0.17
VEGFA-216ENST00000512683 MFSD1Q9H3U5 465 aa13.99□□□□□ -0.17
VEGFA-216ENST00000512683 CHST7Q9NS84 486 aa13.99□□□□□ -0.17
VEGFA-216ENST00000512683 RGL1Q9NZL6 768 aa13.99□□□□□ -0.17
VEGFA-216ENST00000512683 WRAP73Q9P2S5 460 aaPredicted RBP13.99□□□□□ -0.17
VEGFA-216ENST00000512683 IPPQ9Y573 584 aa13.99□□□□□ -0.17
VEGFA-216ENST00000512683 TRIOO75962 3097 aa13.99□□□□□ -0.17
VEGFA-216ENST00000512683 ZFHX2Q9C0A1 2572 aaPredicted RBP13.99□□□□□ -0.17
VEGFA-216ENST00000512683 C5orf42Q9H799 3197 aa13.99□□□□□ -0.17
VEGFA-216ENST00000512683 ARL5CA6NH57 179 aa13.98□□□□□ -0.17
VEGFA-216ENST00000512683 SP100P23497 879 aaPredicted RBP13.98□□□□□ -0.17
VEGFA-216ENST00000512683 NBL1P41271 181 aa13.98□□□□□ -0.17
VEGFA-216ENST00000512683 FOXK2Q01167 660 aa13.98□□□□□ -0.17
VEGFA-216ENST00000512683 DSG1Q02413 1049 aa13.98□□□□□ -0.17
VEGFA-216ENST00000512683 CREMQ03060 361 aa13.98□□□□□ -0.17
VEGFA-216ENST00000512683 SPIRE1Q08AE8 756 aa13.98□□□□□ -0.17
VEGFA-216ENST00000512683 LONRF3Q496Y0 759 aa13.98□□□□□ -0.17
VEGFA-216ENST00000512683 TPH2Q8IWU9 490 aa13.98□□□□□ -0.17
VEGFA-216ENST00000512683 NECAB1Q8N987 351 aa13.98□□□□□ -0.17
VEGFA-216ENST00000512683 OXER1Q8TDS5 423 aa13.98□□□□□ -0.17
VEGFA-216ENST00000512683 DYDC2Q96IM9 177 aa13.98□□□□□ -0.17
VEGFA-216ENST00000512683 PHOX2BQ99453 314 aa13.98□□□□□ -0.17
VEGFA-216ENST00000512683 KCNK12Q9HB15 430 aa13.98□□□□□ -0.17
VEGFA-216ENST00000512683 WDR6Q9NNW5 1121 aaKnown RBP13.98□□□□□ -0.17
VEGFA-216ENST00000512683 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.98□□□□□ -0.174e-7■■■■■ 28.5
VEGFA-216ENST00000512683 FNIP2Q9P278 1114 aa13.98□□□□□ -0.17
VEGFA-216ENST00000512683 WNT16Q9UBV4 365 aa13.98□□□□□ -0.17
VEGFA-216ENST00000512683 PLXNA4Q9HCM2 1894 aa13.97□□□□□ -0.17
VEGFA-216ENST00000512683 ARID2Q68CP9 1835 aa13.97□□□□□ -0.17
VEGFA-216ENST00000512683 A0A1B0GUA9 196 aa13.97□□□□□ -0.17
VEGFA-216ENST00000512683 TSPAN1O60635 241 aa13.97□□□□□ -0.17
VEGFA-216ENST00000512683 GLUD1P00367 558 aa13.97□□□□□ -0.17
VEGFA-216ENST00000512683 PDGFBP01127 241 aaPredicted RBP13.97□□□□□ -0.17
VEGFA-216ENST00000512683 POMCP01189 267 aa13.97□□□□□ -0.17
VEGFA-216ENST00000512683 CENPBP07199 599 aaPredicted RBP13.97□□□□□ -0.17
VEGFA-216ENST00000512683 ASGR2P07307 311 aa13.97□□□□□ -0.17
VEGFA-216ENST00000512683 WEE2P0C1S8 567 aa13.97□□□□□ -0.17
VEGFA-216ENST00000512683 KRT2P35908 639 aa13.97□□□□□ -0.17
VEGFA-216ENST00000512683 ARL2P36404 184 aa13.97□□□□□ -0.17
VEGFA-216ENST00000512683 OR1G1P47890 313 aa13.97□□□□□ -0.17
VEGFA-216ENST00000512683 GLUD2P49448 558 aa13.97□□□□□ -0.17
VEGFA-216ENST00000512683 NCAPH2Q6IBW4 605 aa13.97□□□□□ -0.17
VEGFA-216ENST00000512683 TMEM105Q8N8V8 129 aa13.97□□□□□ -0.17
VEGFA-216ENST00000512683 GTF3C6Q969F1 213 aa13.97□□□□□ -0.17
VEGFA-216ENST00000512683 PRIMPOLQ96LW4 560 aa13.97□□□□□ -0.17
VEGFA-216ENST00000512683 GAD1Q99259 594 aa13.97□□□□□ -0.17
VEGFA-216ENST00000512683 EIF2AK1Q9BQI3 630 aaKnown RBP13.97□□□□□ -0.17
VEGFA-216ENST00000512683 TRIM6Q9C030 488 aaPredicted RBP13.97□□□□□ -0.17
VEGFA-216ENST00000512683 ZDHHC7Q9NXF8 308 aa13.97□□□□□ -0.17
VEGFA-216ENST00000512683 EPS15L1Q9UBC2 864 aa13.97□□□□□ -0.17
VEGFA-216ENST00000512683 ORC3Q9UBD5 711 aaPredicted RBP13.97□□□□□ -0.17
VEGFA-216ENST00000512683 CDH22Q9UJ99 828 aa13.97□□□□□ -0.17
VEGFA-216ENST00000512683 DUSP12Q9UNI6 340 aa13.97□□□□□ -0.17
VEGFA-216ENST00000512683 ZFP37Q9Y6Q3 630 aaPredicted RBP13.97□□□□□ -0.17
VEGFA-216ENST00000512683 PTPRZ1P23471 2315 aaPredicted RBP13.97□□□□□ -0.17
VEGFA-216ENST00000512683 CCDC195A0A1B0GUA6 201 aa13.96□□□□□ -0.17
VEGFA-216ENST00000512683 H0Y858 1186 aa13.96□□□□□ -0.17
VEGFA-216ENST00000512683 INO80B-WBP1J3KQ70 363 aa13.96□□□□□ -0.17
VEGFA-216ENST00000512683 TEX28O15482 410 aa13.96□□□□□ -0.17
VEGFA-216ENST00000512683 B4GALT3O60512 393 aa13.96□□□□□ -0.17
VEGFA-216ENST00000512683 AOC1P19801 751 aa13.96□□□□□ -0.17
VEGFA-216ENST00000512683 AFF1P51825 1210 aaKnown RBP13.96□□□□□ -0.17
VEGFA-216ENST00000512683 NEK4P51957 841 aa13.96□□□□□ -0.17
VEGFA-216ENST00000512683 CTTNQ14247 550 aaKnown RBP13.96□□□□□ -0.17
VEGFA-216ENST00000512683 AMHR2Q16671 573 aa13.96□□□□□ -0.17
VEGFA-216ENST00000512683 USP41Q3LFD5 358 aa13.96□□□□□ -0.17
VEGFA-216ENST00000512683 EARS2Q5JPH6 523 aaKnown RBP13.96□□□□□ -0.17
VEGFA-216ENST00000512683 POTEDQ86YR6 584 aa13.96□□□□□ -0.17
VEGFA-216ENST00000512683 SEMA4AQ9H3S1 761 aa13.96□□□□□ -0.17
VEGFA-216ENST00000512683 XPNPEP1Q9NQW7 623 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms