RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 EIF2AQ9BY44 585 aaKnown RBP16.35■□□□□ 0.21
CCHCR1-229ENST00000512418 CSRNP2Q9H175 543 aa16.35■□□□□ 0.21
CCHCR1-229ENST00000512418 POTEMA6NI47 508 aa16.34■□□□□ 0.21
CCHCR1-229ENST00000512418 MLH1P40692 756 aa16.34■□□□□ 0.21
CCHCR1-229ENST00000512418 MBTD1Q05BQ5 628 aa16.34■□□□□ 0.21
CCHCR1-229ENST00000512418 ST3GAL1Q11201 340 aa16.34■□□□□ 0.21
CCHCR1-229ENST00000512418 SAFBQ15424 915 aaKnown RBP eCLIP16.34■□□□□ 0.21
CCHCR1-229ENST00000512418 ATAT1Q5SQI0 421 aa16.34■□□□□ 0.21
CCHCR1-229ENST00000512418 HACE1Q8IYU2 909 aa16.34■□□□□ 0.21
CCHCR1-229ENST00000512418 C12orf76Q8N812 135 aaPredicted RBP16.34■□□□□ 0.21
CCHCR1-229ENST00000512418 PIGOQ8TEQ8 1089 aa16.34■□□□□ 0.21
CCHCR1-229ENST00000512418 CPB2Q96IY4 423 aa16.34■□□□□ 0.21
CCHCR1-229ENST00000512418 TRIM6Q9C030 488 aaPredicted RBP16.34■□□□□ 0.21
CCHCR1-229ENST00000512418 SFXN1Q9H9B4 322 aa16.34■□□□□ 0.21
CCHCR1-229ENST00000512418 MRPL17Q9NRX2 175 aaKnown RBP16.34■□□□□ 0.21
CCHCR1-229ENST00000512418 ZDBF2Q9HCK1 2354 aa16.33■□□□□ 0.2
CCHCR1-229ENST00000512418 ARL5CA6NH57 179 aa16.33■□□□□ 0.2
CCHCR1-229ENST00000512418 C2CD4DB7Z1M9 353 aa16.33■□□□□ 0.2
CCHCR1-229ENST00000512418 SOD2P04179 222 aa16.33■□□□□ 0.2
CCHCR1-229ENST00000512418 SSBP05455 408 aaKnown RBP eCLIP16.33■□□□□ 0.2
CCHCR1-229ENST00000512418 WEE2P0C1S8 567 aa16.33■□□□□ 0.2
CCHCR1-229ENST00000512418 XRCC6P12956 609 aaKnown RBP eCLIP16.33■□□□□ 0.2
CCHCR1-229ENST00000512418 ARF4P18085 180 aaPredicted RBP16.33■□□□□ 0.2
CCHCR1-229ENST00000512418 GLRA2P23416 452 aa16.33■□□□□ 0.2
CCHCR1-229ENST00000512418 MTMR3Q13615 1198 aa16.33■□□□□ 0.2
CCHCR1-229ENST00000512418 AMHR2Q16671 573 aa16.33■□□□□ 0.2
CCHCR1-229ENST00000512418 ALYREFQ86V81 257 aaKnown RBP16.33■□□□□ 0.2
CCHCR1-229ENST00000512418 COLGALT2Q8IYK4 626 aa16.33■□□□□ 0.2
CCHCR1-229ENST00000512418 TDRD5Q8NAT2 981 aaKnown RBP16.33■□□□□ 0.2
CCHCR1-229ENST00000512418 KREMEN2Q8NCW0 462 aa16.33■□□□□ 0.2
CCHCR1-229ENST00000512418 GAD1Q99259 594 aa16.33■□□□□ 0.2
CCHCR1-229ENST00000512418 PRRX2Q99811 253 aa16.33■□□□□ 0.2
CCHCR1-229ENST00000512418 POLR3FQ9H1D9 316 aaPredicted RBP16.33■□□□□ 0.2
CCHCR1-229ENST00000512418 MARCH5Q9NX47 278 aa16.33■□□□□ 0.2
CCHCR1-229ENST00000512418 DBR1Q9UK59 544 aaKnown RBP16.33■□□□□ 0.2
CCHCR1-229ENST00000512418 SORCS3Q9UPU3 1222 aa16.33■□□□□ 0.2
CCHCR1-229ENST00000512418 USTQ9Y2C2 406 aa16.33■□□□□ 0.2
CCHCR1-229ENST00000512418 HES2Q9Y543 173 aa16.33■□□□□ 0.2
CCHCR1-229ENST00000512418 SPDYE4A6NLX3 237 aa16.32■□□□□ 0.2
CCHCR1-229ENST00000512418 USO1O60763 962 aaKnown RBP16.32■□□□□ 0.2
CCHCR1-229ENST00000512418 LILRB3O75022 631 aa16.32■□□□□ 0.2
CCHCR1-229ENST00000512418 URODP06132 367 aa16.32■□□□□ 0.2
CCHCR1-229ENST00000512418 CNPP09543 421 aaKnown RBP16.32■□□□□ 0.2
CCHCR1-229ENST00000512418 KLRC2P26717 231 aa16.32■□□□□ 0.2
CCHCR1-229ENST00000512418 MCM7P33993 719 aa16.32■□□□□ 0.2
CCHCR1-229ENST00000512418 OR1G1P47890 313 aa16.32■□□□□ 0.2
CCHCR1-229ENST00000512418 CLCN4P51793 760 aa16.32■□□□□ 0.2
CCHCR1-229ENST00000512418 DSC1Q08554 894 aa16.32■□□□□ 0.2
CCHCR1-229ENST00000512418 SLC27A1Q6PCB7 646 aa16.32■□□□□ 0.2
CCHCR1-229ENST00000512418 TMC5Q6UXY8 1006 aa16.32■□□□□ 0.2
CCHCR1-229ENST00000512418 UBALD2Q8IYN6 164 aa16.32■□□□□ 0.2
CCHCR1-229ENST00000512418 MCPH1Q8NEM0 835 aa16.32■□□□□ 0.2
CCHCR1-229ENST00000512418 ZFP42Q96MM3 310 aa16.32■□□□□ 0.2
CCHCR1-229ENST00000512418 KLHL5Q96PQ7 755 aa16.32■□□□□ 0.2
CCHCR1-229ENST00000512418 HERC2P3Q9BVR0 1158 aa16.32■□□□□ 0.2
CCHCR1-229ENST00000512418 TMEM60Q9H2L4 133 aa16.32■□□□□ 0.2
CCHCR1-229ENST00000512418 RNF39Q9H2S5 420 aa16.32■□□□□ 0.2
CCHCR1-229ENST00000512418 NXF3Q9H4D5 531 aaKnown RBP16.32■□□□□ 0.2
CCHCR1-229ENST00000512418 TUFT1Q9NNX1 390 aa16.32■□□□□ 0.2
CCHCR1-229ENST00000512418 SSX2IPQ9Y2D8 614 aa16.32■□□□□ 0.2
CCHCR1-229ENST00000512418 GIT1Q9Y2X7 761 aa16.32■□□□□ 0.2
CCHCR1-229ENST00000512418 PRG3Q9Y2Y8 225 aaPredicted RBP16.32■□□□□ 0.2
CCHCR1-229ENST00000512418 DENND4AQ7Z401 1863 aa16.31■□□□□ 0.2
CCHCR1-229ENST00000512418 KMT2EQ8IZD2 1858 aa16.31■□□□□ 0.2
CCHCR1-229ENST00000512418 ZMYM2Q9UBW7 1377 aa16.31■□□□□ 0.2
CCHCR1-229ENST00000512418 B4GALT5O43286 388 aa16.31■□□□□ 0.2
CCHCR1-229ENST00000512418 NR1I2O75469 434 aa16.31■□□□□ 0.2
CCHCR1-229ENST00000512418 SPATA31C1P0DKV0 1188 aa16.31■□□□□ 0.2
CCHCR1-229ENST00000512418 ATP2B1P20020 1258 aa16.31■□□□□ 0.2
CCHCR1-229ENST00000512418 SCNN1GP51170 649 aa16.31■□□□□ 0.2
CCHCR1-229ENST00000512418 GUCY1B3Q02153 619 aa16.31■□□□□ 0.2
CCHCR1-229ENST00000512418 ORC2Q13416 577 aaPredicted RBP16.31■□□□□ 0.2
CCHCR1-229ENST00000512418 IER5LQ5T953 404 aa16.31■□□□□ 0.2
CCHCR1-229ENST00000512418 KANK3Q6NY19 840 aa16.31■□□□□ 0.2
CCHCR1-229ENST00000512418 CATSPER3Q86XQ3 398 aa16.31■□□□□ 0.2
CCHCR1-229ENST00000512418 RNF168Q8IYW5 571 aaPredicted RBP16.31■□□□□ 0.2
CCHCR1-229ENST00000512418 ZDHHC14Q8IZN3 488 aa16.31■□□□□ 0.2
CCHCR1-229ENST00000512418 PLCD3Q8N3E9 789 aa16.31■□□□□ 0.2
CCHCR1-229ENST00000512418 C8orf76Q96K31 380 aa16.31■□□□□ 0.2
CCHCR1-229ENST00000512418 RPS6KC1Q96S38 1066 aa16.31■□□□□ 0.2
CCHCR1-229ENST00000512418 LLPHQ9BRT6 129 aaKnown RBP16.31■□□□□ 0.2
CCHCR1-229ENST00000512418 APOL6Q9BWW8 343 aa16.31■□□□□ 0.2
CCHCR1-229ENST00000512418 LIMCH1Q9UPQ0 1083 aa16.31■□□□□ 0.2
CCHCR1-229ENST00000512418 TDRD15B5MCY1 1934 aaKnown RBP16.31■□□□□ 0.2
CCHCR1-229ENST00000512418 A0A087WWV3 80 aa16.3■□□□□ 0.2
CCHCR1-229ENST00000512418 A0A1B0GUA9 196 aa16.3■□□□□ 0.2
CCHCR1-229ENST00000512418 LRRIQ4A6NIV6 560 aa16.3■□□□□ 0.2
CCHCR1-229ENST00000512418 C2CD2LO14523 706 aa16.3■□□□□ 0.2
CCHCR1-229ENST00000512418 SEC24BO95487 1268 aa16.3■□□□□ 0.2
CCHCR1-229ENST00000512418 EFEMP2O95967 443 aa16.3■□□□□ 0.2
CCHCR1-229ENST00000512418 ADH1AP07327 375 aa16.3■□□□□ 0.2
CCHCR1-229ENST00000512418 GLUD2P49448 558 aa16.3■□□□□ 0.2
CCHCR1-229ENST00000512418 MRE11P49959 708 aa16.3■□□□□ 0.2
CCHCR1-229ENST00000512418 PTPN5P54829 565 aa16.3■□□□□ 0.2
CCHCR1-229ENST00000512418 PPP4R3CPQ6ZMV5 832 aa16.3■□□□□ 0.2
CCHCR1-229ENST00000512418 C15orf39Q6ZRI6 1047 aa16.3■□□□□ 0.2
CCHCR1-229ENST00000512418 GPR149Q86SP6 731 aa16.3■□□□□ 0.2
CCHCR1-229ENST00000512418 CCDC83Q8IWF9 413 aa16.3■□□□□ 0.2
CCHCR1-229ENST00000512418 PRSS33Q8NF86 280 aa16.3■□□□□ 0.2
CCHCR1-229ENST00000512418 ERMNQ8TAM6 284 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms