RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 PLCD4Q9BRC7 762 aa14.02□□□□□ -0.16
PCDHA4-202ENST00000512229 KIFC3Q9BVG8 833 aa14.02□□□□□ -0.16
PCDHA4-202ENST00000512229 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.02□□□□□ -0.16
PCDHA4-202ENST00000512229 FAN1Q9Y2M0 1017 aa14.02□□□□□ -0.16
PCDHA4-202ENST00000512229 VWA5AO00534 786 aa14.02□□□□□ -0.17
PCDHA4-202ENST00000512229 P4HA2O15460 535 aa14.02□□□□□ -0.17
PCDHA4-202ENST00000512229 ASAP2O43150 1006 aa14.02□□□□□ -0.17
PCDHA4-202ENST00000512229 HBP1O60381 514 aa14.02□□□□□ -0.17
PCDHA4-202ENST00000512229 RNF40O75150 1001 aa14.02□□□□□ -0.17
PCDHA4-202ENST00000512229 OATP04181 439 aa14.02□□□□□ -0.17
PCDHA4-202ENST00000512229 ARL4AP40617 200 aa14.02□□□□□ -0.17
PCDHA4-202ENST00000512229 PMS1P54277 932 aaKnown RBP14.02□□□□□ -0.17
PCDHA4-202ENST00000512229 MDM2Q00987 491 aaPredicted RBP14.02□□□□□ -0.17
PCDHA4-202ENST00000512229 ZNF720Q7Z2F6 126 aa14.02□□□□□ -0.17
PCDHA4-202ENST00000512229 SIX6OS1Q8N1H7 587 aa14.02□□□□□ -0.17
PCDHA4-202ENST00000512229 DDX47Q9H0S4 455 aaKnown RBP14.02□□□□□ -0.17
PCDHA4-202ENST00000512229 CYP26B1Q9NR63 512 aa14.02□□□□□ -0.17
PCDHA4-202ENST00000512229 ERAP1Q9NZ08 941 aa14.02□□□□□ -0.17
PCDHA4-202ENST00000512229 TBX20Q9UMR3 447 aa14.02□□□□□ -0.17
PCDHA4-202ENST00000512229 DSG3P32926 999 aa14.02□□□□□ -0.17
PCDHA4-202ENST00000512229 CASP4P49662 377 aa14.02□□□□□ -0.17
PCDHA4-202ENST00000512229 NAB2Q15742 525 aa14.02□□□□□ -0.17
PCDHA4-202ENST00000512229 FYB2Q5VWT5 728 aa14.02□□□□□ -0.17
PCDHA4-202ENST00000512229 CYP4F22Q6NT55 531 aa14.02□□□□□ -0.17
PCDHA4-202ENST00000512229 SYN2Q92777 582 aaPredicted RBP14.02□□□□□ -0.17
PCDHA4-202ENST00000512229 CCDC97Q96F63 343 aaPredicted RBP14.02□□□□□ -0.17
PCDHA4-202ENST00000512229 KCPQ6ZWJ8 1503 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 HUS1O60921 280 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 HUNKP57058 714 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 MAPK8IP2Q13387 824 aaPredicted RBP14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 SLMAPQ14BN4 828 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 TRIP13Q15645 432 aaPredicted RBP14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 CFAP157Q5JU67 520 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 ALS2CLQ60I27 953 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 REXO1L1PQ8IX06 675 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 C4orf19Q8IY42 314 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 LRRC71Q8N4P6 559 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 TTC39CQ8N584 583 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 OLFML3Q9NRN5 406 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 RTN2O75298 545 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 EPHX2P34913 555 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 TCF7P36402 384 aaPredicted RBP14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 MNAT1P51948 309 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 SF3A3Q12874 501 aaKnown RBP eCLIP14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 NCOA4Q13772 614 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 CCDC13Q8IYE1 715 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 GPC2Q8N158 579 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 CCHCR1Q8TD31 782 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 HEMGNQ9BXL5 484 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 TMEM8AQ9HCN3 771 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 SNX24Q9Y343 169 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 MAD1L1Q9Y6D9 718 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 SCP2P22307 547 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 ZNF157P51786 506 aaPredicted RBP14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 CDO1Q16878 200 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 ATP2A3Q93084 1043 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 RBM41Q96IZ5 413 aaKnown RBP14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 AGO4Q9HCK5 861 aaKnown RBP14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 MEIS2O14770 477 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 SLITRK3O94933 977 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 TJP3O95049 919 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 CCDC6Q16204 474 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 TMEM119Q4V9L6 283 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 TATDN1Q6P1N9 297 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 MORC4Q8TE76 937 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 KIF12Q96FN5 646 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 ACAP3Q96P50 834 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 ZWILCHQ9H900 591 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 SEPT10Q9P0V9 454 aa14.01□□□□□ -0.17
PCDHA4-202ENST00000512229 POC1B-GALNT4F8VUJ3 575 aa14□□□□□ -0.17
PCDHA4-202ENST00000512229 HGSO14964 777 aaPredicted RBP14□□□□□ -0.17
PCDHA4-202ENST00000512229 AKAP3O75969 853 aa14□□□□□ -0.17
PCDHA4-202ENST00000512229 GUCY2CP25092 1073 aa14□□□□□ -0.17
PCDHA4-202ENST00000512229 ERVK-24P63145 666 aa14□□□□□ -0.17
PCDHA4-202ENST00000512229 KCNK18Q7Z418 384 aa14□□□□□ -0.17
PCDHA4-202ENST00000512229 C10orf67Q8IYJ2 551 aa14□□□□□ -0.17
PCDHA4-202ENST00000512229 CCNYQ8ND76 341 aa14□□□□□ -0.17
PCDHA4-202ENST00000512229 DNAJC7Q99615 494 aa14□□□□□ -0.17
PCDHA4-202ENST00000512229 GRID2IPA4D2P6 1211 aa14□□□□□ -0.17
PCDHA4-202ENST00000512229 BUB1BO60566 1050 aaPredicted RBP14□□□□□ -0.17
PCDHA4-202ENST00000512229 YWHAGP61981 247 aaKnown RBP eCLIP14□□□□□ -0.17
PCDHA4-202ENST00000512229 LAMC2Q13753 1193 aa14□□□□□ -0.17
PCDHA4-202ENST00000512229 KYAT1Q16773 422 aa14□□□□□ -0.17
PCDHA4-202ENST00000512229 MFSD14CQ5VZR4 134 aa14□□□□□ -0.17
PCDHA4-202ENST00000512229 ZNF384Q8TF68 577 aa14□□□□□ -0.17
PCDHA4-202ENST00000512229 HAUS2Q9NVX0 235 aa14□□□□□ -0.17
PCDHA4-202ENST00000512229 PLEKP08567 350 aaPredicted RBP14□□□□□ -0.17
PCDHA4-202ENST00000512229 NPTX2P47972 431 aa14□□□□□ -0.17
PCDHA4-202ENST00000512229 RARRES1P49788 294 aa14□□□□□ -0.17
PCDHA4-202ENST00000512229 PSMC1P62191 440 aaKnown RBP14□□□□□ -0.17
PCDHA4-202ENST00000512229 CDC42EP1Q00587 391 aa14□□□□□ -0.17
PCDHA4-202ENST00000512229 PGM5Q15124 567 aa14□□□□□ -0.17
PCDHA4-202ENST00000512229 EFCAB12Q6NXP0 572 aa14□□□□□ -0.17
PCDHA4-202ENST00000512229 DARS2Q6PI48 645 aaKnown RBP14□□□□□ -0.17
PCDHA4-202ENST00000512229 SPATC1LQ9H0A9 340 aa14□□□□□ -0.17
PCDHA4-202ENST00000512229 WNT8AQ9H1J5 351 aa14□□□□□ -0.17
PCDHA4-202ENST00000512229 LRFN2Q9ULH4 789 aa14□□□□□ -0.17
PCDHA4-202ENST00000512229 SLIT2O94813 1529 aa13.99□□□□□ -0.17
PCDHA4-202ENST00000512229 FAM208AQ9UK61 1670 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms