RNA–Protein interactions for RNA: ENST00000512069.6

PDE4D-220, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-220ENST00000512069 HECAQ9UBI9 543 aaPredicted RBP6.28□□□□□ -1.4
PDE4D-220ENST00000512069 CYP27B1O15528 508 aa6.27□□□□□ -1.41
PDE4D-220ENST00000512069 C6P13671 934 aa6.27□□□□□ -1.41
PDE4D-220ENST00000512069 ANO4Q32M45 955 aa6.27□□□□□ -1.41
PDE4D-220ENST00000512069 NRN1LQ496H8 165 aa6.27□□□□□ -1.41
PDE4D-220ENST00000512069 USP39Q53GS9 565 aaKnown RBP6.27□□□□□ -1.41
PDE4D-220ENST00000512069 NECAB2Q7Z6G3 386 aa6.27□□□□□ -1.41
PDE4D-220ENST00000512069 Q8N1X5 172 aa6.27□□□□□ -1.41
PDE4D-220ENST00000512069 MSL3Q8N5Y2 521 aaKnown RBP6.27□□□□□ -1.41
PDE4D-220ENST00000512069 SNX33Q8WV41 574 aa6.27□□□□□ -1.41
PDE4D-220ENST00000512069 AUTS2Q8WXX7 1259 aa6.27□□□□□ -1.41
PDE4D-220ENST00000512069 FATE1Q969F0 183 aa6.27□□□□□ -1.41
PDE4D-220ENST00000512069 MIEF2Q96C03 454 aa6.27□□□□□ -1.41
PDE4D-220ENST00000512069 ZNF512Q96ME7 567 aaPredicted RBP6.27□□□□□ -1.41
PDE4D-220ENST00000512069 VPS11Q9H270 941 aa6.27□□□□□ -1.41
PDE4D-220ENST00000512069 NCDNQ9UBB6 729 aa6.27□□□□□ -1.41
PDE4D-220ENST00000512069 DPP7Q9UHL4 492 aa6.27□□□□□ -1.41
PDE4D-220ENST00000512069 EDARQ9UNE0 448 aa6.27□□□□□ -1.41
PDE4D-220ENST00000512069 KRTAP23-1A1A580 65 aa6.26□□□□□ -1.41
PDE4D-220ENST00000512069 HOXA3O43365 443 aaPredicted RBP6.26□□□□□ -1.41
PDE4D-220ENST00000512069 CTSSP25774 331 aa6.26□□□□□ -1.41
PDE4D-220ENST00000512069 AMPD3Q01432 767 aa6.26□□□□□ -1.41
PDE4D-220ENST00000512069 MUM1Q2TAK8 710 aa6.26□□□□□ -1.41
PDE4D-220ENST00000512069 ABHD15Q6UXT9 468 aa6.26□□□□□ -1.41
PDE4D-220ENST00000512069 GSPT2Q8IYD1 628 aaKnown RBP6.26□□□□□ -1.41
PDE4D-220ENST00000512069 COG1Q8WTW3 980 aa6.26□□□□□ -1.41
PDE4D-220ENST00000512069 TGFBRAP1Q8WUH2 860 aa6.26□□□□□ -1.41
PDE4D-220ENST00000512069 ARL8AQ96BM9 186 aa6.26□□□□□ -1.41
PDE4D-220ENST00000512069 AURKAIP1Q9NWT8 199 aaPredicted RBP6.26□□□□□ -1.41
PDE4D-220ENST00000512069 ERCC6L2Q5T890 1561 aa6.26□□□□□ -1.41
PDE4D-220ENST00000512069 RPTORQ8N122 1335 aa6.25□□□□□ -1.41
PDE4D-220ENST00000512069 CAPN14A8MX76 684 aa6.25□□□□□ -1.41
PDE4D-220ENST00000512069 AKAP8O43823 692 aaKnown RBP6.25□□□□□ -1.41
PDE4D-220ENST00000512069 MFAP3LO75121 409 aa6.25□□□□□ -1.41
PDE4D-220ENST00000512069 TMEM127O75204 238 aa6.25□□□□□ -1.41
PDE4D-220ENST00000512069 GASTP01350 101 aa6.25□□□□□ -1.41
PDE4D-220ENST00000512069 CDK11BP21127 795 aaKnown RBP6.25□□□□□ -1.41
PDE4D-220ENST00000512069 TACR2P21452 398 aa6.25□□□□□ -1.41
PDE4D-220ENST00000512069 ACRV1P26436 265 aa6.25□□□□□ -1.41
PDE4D-220ENST00000512069 CANXP27824 592 aaKnown RBP6.25□□□□□ -1.41
PDE4D-220ENST00000512069 DUSP2Q05923 314 aa6.25□□□□□ -1.41
PDE4D-220ENST00000512069 MRPL49Q13405 166 aaKnown RBP6.25□□□□□ -1.41
PDE4D-220ENST00000512069 CRIP3Q6Q6R5 217 aa6.25□□□□□ -1.41
PDE4D-220ENST00000512069 BTNL9Q6UXG8 535 aa6.25□□□□□ -1.41
PDE4D-220ENST00000512069 APBB1IPQ7Z5R6 666 aaPredicted RBP6.25□□□□□ -1.41
PDE4D-220ENST00000512069 SLC16A11Q8NCK7 471 aa6.25□□□□□ -1.41
PDE4D-220ENST00000512069 OR5M3Q8NGP4 307 aa6.25□□□□□ -1.41
PDE4D-220ENST00000512069 SCAND2PQ9GZW5 306 aaPredicted RBP6.25□□□□□ -1.41
PDE4D-220ENST00000512069 IFT122Q9HBG6 1241 aa6.25□□□□□ -1.41
PDE4D-220ENST00000512069 GIT1Q9Y2X7 761 aa6.25□□□□□ -1.41
PDE4D-220ENST00000512069 AQRO60306 1485 aaKnown RBP eCLIP6.24□□□□□ -1.41
PDE4D-220ENST00000512069 PHF2O75151 1096 aa6.24□□□□□ -1.41
PDE4D-220ENST00000512069 GYPEP15421 78 aa6.24□□□□□ -1.41
PDE4D-220ENST00000512069 CASRP41180 1078 aa6.24□□□□□ -1.41
PDE4D-220ENST00000512069 MTNR1BP49286 362 aa6.24□□□□□ -1.41
PDE4D-220ENST00000512069 DGCR2P98153 550 aa6.24□□□□□ -1.41
PDE4D-220ENST00000512069 CDK17Q00537 523 aa6.24□□□□□ -1.41
PDE4D-220ENST00000512069 KLF1Q13351 362 aaPredicted RBP6.24□□□□□ -1.41
PDE4D-220ENST00000512069 ELAVL1Q15717 326 aaKnown RBP6.24□□□□□ -1.41
PDE4D-220ENST00000512069 INAVAQ3KP66 663 aa6.24□□□□□ -1.41
PDE4D-220ENST00000512069 TOR2AQ5JU69 321 aa6.24□□□□□ -1.41
PDE4D-220ENST00000512069 METTL24Q5JXM2 366 aa6.24□□□□□ -1.41
PDE4D-220ENST00000512069 RNF207Q6ZRF8 634 aa6.24□□□□□ -1.41
PDE4D-220ENST00000512069 CNTD1Q8N815 330 aa6.24□□□□□ -1.41
PDE4D-220ENST00000512069 GPR156Q8NFN8 814 aa6.24□□□□□ -1.41
PDE4D-220ENST00000512069 MDGA1Q8NFP4 955 aa6.24□□□□□ -1.41
PDE4D-220ENST00000512069 TSPEARQ8WU66 669 aa6.24□□□□□ -1.41
PDE4D-220ENST00000512069 PDCD2LQ9BRP1 358 aa6.24□□□□□ -1.41
PDE4D-220ENST00000512069 ZNF703Q9H7S9 590 aaPredicted RBP6.24□□□□□ -1.41
PDE4D-220ENST00000512069 SCOCQ9UIL1 159 aa6.24□□□□□ -1.41
PDE4D-220ENST00000512069 WASHC2AQ641Q2 1341 aa6.24□□□□□ -1.41
PDE4D-220ENST00000512069 WIZO95785 1651 aa6.23□□□□□ -1.41
PDE4D-220ENST00000512069 SYNJ1O43426 1573 aa6.23□□□□□ -1.41
PDE4D-220ENST00000512069 GAPVD1Q14C86 1478 aa6.23□□□□□ -1.41
PDE4D-220ENST00000512069 TRIM75PA6NK02 468 aa6.23□□□□□ -1.41
PDE4D-220ENST00000512069 STC2O76061 302 aa6.23□□□□□ -1.41
PDE4D-220ENST00000512069 GZMKP49863 264 aa6.23□□□□□ -1.41
PDE4D-220ENST00000512069 FOXE3Q13461 319 aa6.23□□□□□ -1.41
PDE4D-220ENST00000512069 ADRM1Q16186 407 aa6.23□□□□□ -1.41
PDE4D-220ENST00000512069 GJC2Q5T442 439 aaPredicted RBP6.23□□□□□ -1.41
PDE4D-220ENST00000512069 HTR3DQ70Z44 454 aa6.23□□□□□ -1.41
PDE4D-220ENST00000512069 TMPRSS6Q8IU80 811 aa6.23□□□□□ -1.41
PDE4D-220ENST00000512069 C1orf210Q8IVY1 113 aa6.23□□□□□ -1.41
PDE4D-220ENST00000512069 LILRA3Q8N6C8 439 aaPredicted RBP6.23□□□□□ -1.41
PDE4D-220ENST00000512069 GLB1L3Q8NCI6 653 aaPredicted RBP6.23□□□□□ -1.41
PDE4D-220ENST00000512069 IL17DQ8TAD2 202 aa6.23□□□□□ -1.41
PDE4D-220ENST00000512069 ST8SIA2Q92186 375 aa6.23□□□□□ -1.41
PDE4D-220ENST00000512069 IL17RAQ96F46 866 aa6.23□□□□□ -1.41
PDE4D-220ENST00000512069 ZNF341Q9BYN7 854 aa6.23□□□□□ -1.41
PDE4D-220ENST00000512069 TRIM8Q9BZR9 551 aa6.23□□□□□ -1.41
PDE4D-220ENST00000512069 QRSL1Q9H0R6 528 aaKnown RBP6.23□□□□□ -1.41
PDE4D-220ENST00000512069 DNAJC28Q9NX36 388 aa6.23□□□□□ -1.41
PDE4D-220ENST00000512069 HS3ST3A1Q9Y663 406 aa6.23□□□□□ -1.41
PDE4D-220ENST00000512069 TARBP1Q13395 1621 aaKnown RBP6.23□□□□□ -1.41
PDE4D-220ENST00000512069 TOPBP1Q92547 1522 aa6.23□□□□□ -1.41
PDE4D-220ENST00000512069 XDHP47989 1333 aa6.23□□□□□ -1.41
PDE4D-220ENST00000512069 HECW2Q9P2P5 1572 aa6.23□□□□□ -1.41
PDE4D-220ENST00000512069 PRAMEF4O60810 478 aa6.22□□□□□ -1.41
PDE4D-220ENST00000512069 IPO13O94829 963 aaKnown RBP6.22□□□□□ -1.41
PDE4D-220ENST00000512069 SLC5A3P53794 718 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms