RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 ZNF579Q8NAF0 562 aaKnown RBP21.35■■□□□ 1.01
HMGCS1-206ENST00000511774 SMG8Q8ND04 991 aaKnown RBP21.35■■□□□ 1.01
HMGCS1-206ENST00000511774 FGF14Q92915 247 aa21.35■■□□□ 1.01
HMGCS1-206ENST00000511774 TEKT3Q9BXF9 490 aa21.35■■□□□ 1.01
HMGCS1-206ENST00000511774 INO80BQ9C086 356 aaPredicted RBP21.35■■□□□ 1.01
HMGCS1-206ENST00000511774 RNF39Q9H2S5 420 aa21.35■■□□□ 1.01
HMGCS1-206ENST00000511774 C6orf50Q9HD87 102 aa21.35■■□□□ 1.01
HMGCS1-206ENST00000511774 STK39Q9UEW8 545 aa21.35■■□□□ 1.01
HMGCS1-206ENST00000511774 NOTCH4Q99466 2003 aa21.34■■□□□ 1.01
HMGCS1-206ENST00000511774 TGM5O43548 720 aa21.34■■□□□ 1.01
HMGCS1-206ENST00000511774 DNM2P50570 870 aa21.34■■□□□ 1.01
HMGCS1-206ENST00000511774 ATXN1P54253 815 aaKnown RBP21.34■■□□□ 1.01
HMGCS1-206ENST00000511774 DSG1Q02413 1049 aa21.34■■□□□ 1.01
HMGCS1-206ENST00000511774 DSC1Q08554 894 aa21.34■■□□□ 1.01
HMGCS1-206ENST00000511774 LILRA6Q6PI73 481 aa21.34■■□□□ 1.01
HMGCS1-206ENST00000511774 PARM1Q6UWI2 310 aa21.34■■□□□ 1.01
HMGCS1-206ENST00000511774 MIER3Q7Z3K6 550 aa21.34■■□□□ 1.01
HMGCS1-206ENST00000511774 GLYCTKQ8IVS8 523 aa21.34■■□□□ 1.01
HMGCS1-206ENST00000511774 FAM193BQ96PV7 902 aaPredicted RBP21.34■■□□□ 1.01
HMGCS1-206ENST00000511774 DDX11L8A8MPP1 907 aa21.33■■□□□ 1.01
HMGCS1-206ENST00000511774 KINO60870 393 aaKnown RBP21.33■■□□□ 1.01
HMGCS1-206ENST00000511774 OR1G1P47890 313 aa21.33■■□□□ 1.01
HMGCS1-206ENST00000511774 VARS2Q5ST30 1063 aaKnown RBP21.33■■□□□ 1.01
HMGCS1-206ENST00000511774 DHX32Q7L7V1 743 aaKnown RBP21.33■■□□□ 1.01
HMGCS1-206ENST00000511774 DDX23Q9BUQ8 820 aaKnown RBP21.33■■□□□ 1.01
HMGCS1-206ENST00000511774 GPR62Q9BZJ7 368 aa21.33■■□□□ 1.01
HMGCS1-206ENST00000511774 ANO2Q9NQ90 1003 aa21.33■■□□□ 1.01
HMGCS1-206ENST00000511774 CHST7Q9NS84 486 aa21.33■■□□□ 1.01
HMGCS1-206ENST00000511774 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.33■■□□□ 1.01
HMGCS1-206ENST00000511774 CNTNAP2Q9UHC6 1331 aa21.32■■□□□ 1
HMGCS1-206ENST00000511774 GAS2O43903 313 aaKnown RBP21.32■■□□□ 1
HMGCS1-206ENST00000511774 RPL17P18621 184 aaKnown RBP21.32■■□□□ 1
HMGCS1-206ENST00000511774 NCLP19338 710 aaKnown RBP21.32■■□□□ 1
HMGCS1-206ENST00000511774 NPEPPSP55786 919 aa21.32■■□□□ 1
HMGCS1-206ENST00000511774 NTHL1P78549 312 aa21.32■■□□□ 1
HMGCS1-206ENST00000511774 SNW1Q13573 536 aaKnown RBP21.32■■□□□ 1
HMGCS1-206ENST00000511774 PHKBQ93100 1093 aa21.32■■□□□ 1
HMGCS1-206ENST00000511774 EIF2AQ9BY44 585 aaKnown RBP21.32■■□□□ 1
HMGCS1-206ENST00000511774 PRKD2Q9BZL6 878 aa21.32■■□□□ 1
HMGCS1-206ENST00000511774 PIDD1Q9HB75 910 aa21.32■■□□□ 1
HMGCS1-206ENST00000511774 KANSL3Q9P2N6 904 aa21.32■■□□□ 1
HMGCS1-206ENST00000511774 HES2Q9Y543 173 aa21.32■■□□□ 1
HMGCS1-206ENST00000511774 COL4A3BPQ9Y5P4 624 aa21.32■■□□□ 1
HMGCS1-206ENST00000511774 TDP2O95551 362 aa21.31■■□□□ 1
HMGCS1-206ENST00000511774 CPA1P15085 419 aa21.31■■□□□ 1
HMGCS1-206ENST00000511774 TGM1P22735 817 aa21.31■■□□□ 1
HMGCS1-206ENST00000511774 RDM1Q8NG50 284 aa21.31■■□□□ 1
HMGCS1-206ENST00000511774 HDAC7Q8WUI4 952 aa21.31■■□□□ 1
HMGCS1-206ENST00000511774 ZFP42Q96MM3 310 aa21.31■■□□□ 1
HMGCS1-206ENST00000511774 GAD1Q99259 594 aa21.31■■□□□ 1
HMGCS1-206ENST00000511774 PLEKHA4Q9H4M7 779 aa21.31■■□□□ 1
HMGCS1-206ENST00000511774 NAP1L2Q9ULW6 460 aaPredicted RBP21.31■■□□□ 1
HMGCS1-206ENST00000511774 ARL5CA6NH57 179 aa21.3■■□□□ 1
HMGCS1-206ENST00000511774 PRPF3O43395 683 aaKnown RBP21.3■■□□□ 1
HMGCS1-206ENST00000511774 CD72P21854 359 aa21.3■■□□□ 1
HMGCS1-206ENST00000511774 MLH1P40692 756 aa21.3■■□□□ 1
HMGCS1-206ENST00000511774 SCNN1GP51170 649 aa21.3■■□□□ 1
HMGCS1-206ENST00000511774 PRPF31Q8WWY3 499 aaKnown RBP21.3■■□□□ 1
HMGCS1-206ENST00000511774 RABGGTAQ92696 567 aa21.3■■□□□ 1
HMGCS1-206ENST00000511774 TMEM143Q96AN5 459 aa21.3■■□□□ 1
HMGCS1-206ENST00000511774 SPATA6Q9NWH7 488 aaPredicted RBP21.3■■□□□ 1
HMGCS1-206ENST00000511774 ZDHHC7Q9NXF8 308 aa21.3■■□□□ 1
HMGCS1-206ENST00000511774 VPS54Q9P1Q0 977 aa21.3■■□□□ 1
HMGCS1-206ENST00000511774 WRAP73Q9P2S5 460 aaPredicted RBP21.3■■□□□ 1
HMGCS1-206ENST00000511774 NCDNQ9UBB6 729 aa21.3■■□□□ 1
HMGCS1-206ENST00000511774 SSX2IPQ9Y2D8 614 aa21.3■■□□□ 1
HMGCS1-206ENST00000511774 IPPQ9Y573 584 aa21.3■■□□□ 1
HMGCS1-206ENST00000511774 KANSL1LA0AUZ9 987 aa21.29■■□□□ 1
HMGCS1-206ENST00000511774 EML1O00423 815 aa21.29■■□□□ 1
HMGCS1-206ENST00000511774 SRGAP2CP0DJJ0 459 aa21.29■■□□□ 1
HMGCS1-206ENST00000511774 GNA11P29992 359 aa21.29■■□□□ 1
HMGCS1-206ENST00000511774 USP11P51784 963 aa21.29■■□□□ 1
HMGCS1-206ENST00000511774 RCAN1P53805 252 aa21.29■■□□□ 1
HMGCS1-206ENST00000511774 CSTF1Q05048 431 aaKnown RBP21.29■■□□□ 1
HMGCS1-206ENST00000511774 ZNF528Q3MIS6 628 aa21.29■■□□□ 1
HMGCS1-206ENST00000511774 ETNPPLQ8TBG4 499 aa21.29■■□□□ 1
HMGCS1-206ENST00000511774 BMP2KQ9NSY1 1161 aaPredicted RBP21.29■■□□□ 1
HMGCS1-206ENST00000511774 CACNG4Q9UBN1 327 aa21.29■■□□□ 1
HMGCS1-206ENST00000511774 DPP7Q9UHL4 492 aa21.29■■□□□ 1
HMGCS1-206ENST00000511774 ARID2Q68CP9 1835 aa21.29■■□□□ 1
HMGCS1-206ENST00000511774 F5P12259 2224 aa21.28■■□□□ 1
HMGCS1-206ENST00000511774 DCDC2BA2VCK2 349 aa21.28■■□□□ 1
HMGCS1-206ENST00000511774 ZMYND10O75800 440 aa21.28■■□□□ 1
HMGCS1-206ENST00000511774 ITGA4P13612 1032 aa21.28■■□□□ 1
HMGCS1-206ENST00000511774 FSHRP23945 695 aa21.28■■□□□ 1
HMGCS1-206ENST00000511774 LAMTOR4Q0VGL1 99 aa21.28■■□□□ 1
HMGCS1-206ENST00000511774 MLF2Q15773 248 aaPredicted RBP21.28■■□□□ 1
HMGCS1-206ENST00000511774 NTRK3Q16288 839 aa21.28■■□□□ 1
HMGCS1-206ENST00000511774 Q4G0T1 1027 aa21.28■■□□□ 1
HMGCS1-206ENST00000511774 SRGAP1Q7Z6B7 1085 aa21.28■■□□□ 1
HMGCS1-206ENST00000511774 GRASPQ7Z6J2 395 aaPredicted RBP21.28■■□□□ 1
HMGCS1-206ENST00000511774 ZBTB44Q8NCP5 570 aa21.28■■□□□ 1
HMGCS1-206ENST00000511774 GSTCDQ8NEC7 633 aa21.28■■□□□ 1
HMGCS1-206ENST00000511774 TBCKQ8TEA7 893 aa21.28■■□□□ 1
HMGCS1-206ENST00000511774 CCDC12Q8WUD4 166 aaPredicted RBP21.28■■□□□ 1
HMGCS1-206ENST00000511774 MBOAT7Q96N66 472 aa21.28■■□□□ 1
HMGCS1-206ENST00000511774 PARD6AQ9NPB6 346 aa21.28■■□□□ 1
HMGCS1-206ENST00000511774 FBXO4Q9UKT5 387 aa21.28■■□□□ 1
HMGCS1-206ENST00000511774 CNOT1A5YKK6 2376 aaKnown RBP21.28■■□□□ 1
HMGCS1-206ENST00000511774 NID2Q14112 1375 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms