RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 U2SURPO15042 1029 aaKnown RBP7.21□□□□□ -1.26
GYPB-212ENST00000511198 STARD3NLO95772 234 aa7.21□□□□□ -1.26
GYPB-212ENST00000511198 GRK2P25098 689 aa7.21□□□□□ -1.26
GYPB-212ENST00000511198 RPS12P25398 132 aaKnown RBP7.21□□□□□ -1.26
GYPB-212ENST00000511198 GRK3P35626 688 aa7.21□□□□□ -1.26
GYPB-212ENST00000511198 GJA9P57773 515 aa7.21□□□□□ -1.26
GYPB-212ENST00000511198 KCTD2Q14681 263 aa7.21□□□□□ -1.26
GYPB-212ENST00000511198 KIZQ2M2Z5 673 aa7.21□□□□□ -1.26
GYPB-212ENST00000511198 PLEKHO1Q53GL0 409 aaPredicted RBP7.21□□□□□ -1.26
GYPB-212ENST00000511198 NECAB2Q7Z6G3 386 aa7.21□□□□□ -1.26
GYPB-212ENST00000511198 IFNL3Q8IZI9 196 aa7.21□□□□□ -1.26
GYPB-212ENST00000511198 SUPT20HQ8NEM7 779 aa7.21□□□□□ -1.26
GYPB-212ENST00000511198 CLEC4DQ8WXI8 215 aa7.21□□□□□ -1.26
GYPB-212ENST00000511198 PPM1EQ8WY54 764 aa7.21□□□□□ -1.26
GYPB-212ENST00000511198 CLMNQ96JQ2 1002 aa7.21□□□□□ -1.26
GYPB-212ENST00000511198 KRTAP9-3Q9BYQ3 159 aa7.21□□□□□ -1.26
GYPB-212ENST00000511198 THEGQ9P2T0 379 aa7.21□□□□□ -1.26
GYPB-212ENST00000511198 RIPOR2Q9Y4F9 1068 aa7.21□□□□□ -1.26
GYPB-212ENST00000511198 RTL9Q8NET4 1388 aa7.2□□□□□ -1.26
GYPB-212ENST00000511198 ABCC12Q96J65 1359 aa7.2□□□□□ -1.26
GYPB-212ENST00000511198 ANKRD11Q6UB99 2663 aaPredicted RBP7.2□□□□□ -1.26
GYPB-212ENST00000511198 SLC27A2O14975 620 aa7.2□□□□□ -1.26
GYPB-212ENST00000511198 MAFKO60675 156 aa7.2□□□□□ -1.26
GYPB-212ENST00000511198 CELA3BP08861 270 aa7.2□□□□□ -1.26
GYPB-212ENST00000511198 ZBTB48P10074 688 aaPredicted RBP7.2□□□□□ -1.26
GYPB-212ENST00000511198 PRMT2P55345 433 aa7.2□□□□□ -1.26
GYPB-212ENST00000511198 ZNF280AP59817 542 aaPredicted RBP7.2□□□□□ -1.26
GYPB-212ENST00000511198 LACTBP83111 547 aaPredicted RBP7.2□□□□□ -1.26
GYPB-212ENST00000511198 SERINC3Q13530 473 aa7.2□□□□□ -1.26
GYPB-212ENST00000511198 FOXB2Q5VYV0 432 aa7.2□□□□□ -1.26
GYPB-212ENST00000511198 OTUD7BQ6GQQ9 843 aa7.2□□□□□ -1.26
GYPB-212ENST00000511198 CLEC4GQ6UXB4 293 aa7.2□□□□□ -1.26
GYPB-212ENST00000511198 ARMC9Q7Z3E5 817 aa7.2□□□□□ -1.26
GYPB-212ENST00000511198 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.2□□□□□ -1.26
GYPB-212ENST00000511198 DDX1Q92499 740 aaKnown RBP7.2□□□□□ -1.26
GYPB-212ENST00000511198 SLC52A2Q9HAB3 445 aa7.2□□□□□ -1.26
GYPB-212ENST00000511198 SIRPGQ9P1W8 387 aa7.2□□□□□ -1.26
GYPB-212ENST00000511198 PFDN2Q9UHV9 154 aa7.2□□□□□ -1.26
GYPB-212ENST00000511198 NIP7Q9Y221 180 aaKnown RBP eCLIP7.2□□□□□ -1.26
GYPB-212ENST00000511198 COL3A1P02461 1466 aaPredicted RBP7.19□□□□□ -1.26
GYPB-212ENST00000511198 DDX3XO00571 662 aaKnown RBP eCLIP7.19□□□□□ -1.26
GYPB-212ENST00000511198 DIAPH1O60610 1272 aaKnown RBP7.19□□□□□ -1.26
GYPB-212ENST00000511198 COL6A2P12110 1019 aa7.19□□□□□ -1.26
GYPB-212ENST00000511198 GTF2F1P35269 517 aaKnown RBP eCLIP7.19□□□□□ -1.26
GYPB-212ENST00000511198 RBL2Q08999 1139 aa7.19□□□□□ -1.26
GYPB-212ENST00000511198 MTERF2Q49AM1 385 aa7.19□□□□□ -1.26
GYPB-212ENST00000511198 FAM26FQ5R3K3 315 aa7.19□□□□□ -1.26
GYPB-212ENST00000511198 DPP8Q6V1X1 898 aaPredicted RBP7.19□□□□□ -1.26
GYPB-212ENST00000511198 PROSER1Q86XN7 944 aa7.19□□□□□ -1.26
GYPB-212ENST00000511198 SCUBE1Q8IWY4 988 aa7.19□□□□□ -1.26
GYPB-212ENST00000511198 TRIM48Q8IWZ4 208 aa7.19□□□□□ -1.26
GYPB-212ENST00000511198 RBM12BQ8IXT5 1001 aaKnown RBP7.19□□□□□ -1.26
GYPB-212ENST00000511198 ZBTB38Q8NAP3 1195 aaPredicted RBP7.19□□□□□ -1.26
GYPB-212ENST00000511198 TXNDC5Q8NBS9 432 aaKnown RBP7.19□□□□□ -1.26
GYPB-212ENST00000511198 TTLL11Q8NHH1 800 aa7.19□□□□□ -1.26
GYPB-212ENST00000511198 UHMK1Q8TAS1 419 aaKnown RBP7.19□□□□□ -1.26
GYPB-212ENST00000511198 RPGRQ92834 1020 aaKnown RBP7.19□□□□□ -1.26
GYPB-212ENST00000511198 ZNF496Q96IT1 587 aaPredicted RBP7.19□□□□□ -1.26
GYPB-212ENST00000511198 DEFB118Q96PH6 123 aa7.19□□□□□ -1.26
GYPB-212ENST00000511198 BDH2Q9BUT1 245 aa7.19□□□□□ -1.26
GYPB-212ENST00000511198 DBNDD1Q9H9R9 158 aa7.19□□□□□ -1.26
GYPB-212ENST00000511198 RBPJLQ9UBG7 517 aa7.19□□□□□ -1.26
GYPB-212ENST00000511198 SRRDQ9UH36 339 aa7.19□□□□□ -1.26
GYPB-212ENST00000511198 TRAF6Q9Y4K3 522 aa7.19□□□□□ -1.26
GYPB-212ENST00000511198 FAM205AQ6ZU69 1335 aa7.19□□□□□ -1.26
GYPB-212ENST00000511198 TRANK1O15050 2925 aa7.18□□□□□ -1.26
GYPB-212ENST00000511198 NKRFO15226 690 aaKnown RBP eCLIP7.18□□□□□ -1.26
GYPB-212ENST00000511198 PPM1GO15355 546 aaPredicted RBP7.18□□□□□ -1.26
GYPB-212ENST00000511198 SOD2P04179 222 aa7.18□□□□□ -1.26
GYPB-212ENST00000511198 ZNF28P17035 718 aa7.18□□□□□ -1.26
GYPB-212ENST00000511198 CNR2P34972 360 aa7.18□□□□□ -1.26
GYPB-212ENST00000511198 GRIN1Q05586 938 aa7.18□□□□□ -1.26
GYPB-212ENST00000511198 SSRP1Q08945 709 aaKnown RBP7.18□□□□□ -1.26
GYPB-212ENST00000511198 FAM209AQ5JX71 171 aa7.18□□□□□ -1.26
GYPB-212ENST00000511198 UBXN11Q5T124 520 aa7.18□□□□□ -1.26
GYPB-212ENST00000511198 MCTP2Q6DN12 878 aa7.18□□□□□ -1.26
GYPB-212ENST00000511198 RBM17Q96I25 401 aaKnown RBP7.18□□□□□ -1.26
GYPB-212ENST00000511198 ZSWIM3Q96MP5 696 aa7.18□□□□□ -1.26
GYPB-212ENST00000511198 KCNJ15Q99712 375 aa7.18□□□□□ -1.26
GYPB-212ENST00000511198 TELO2Q9Y4R8 837 aa7.18□□□□□ -1.26
GYPB-212ENST00000511198 ZFHX2Q9C0A1 2572 aaPredicted RBP7.18□□□□□ -1.26
GYPB-212ENST00000511198 LTFP02788 710 aa7.17□□□□□ -1.26
GYPB-212ENST00000511198 VIL1P09327 827 aaKnown RBP7.17□□□□□ -1.26
GYPB-212ENST00000511198 C6orf222P0C671 652 aaPredicted RBP7.17□□□□□ -1.26
GYPB-212ENST00000511198 PIP4K2AP48426 406 aaPredicted RBP7.17□□□□□ -1.26
GYPB-212ENST00000511198 MLLT6P55198 1093 aaPredicted RBP7.17□□□□□ -1.26
GYPB-212ENST00000511198 UBXN2AP68543 259 aa7.17□□□□□ -1.26
GYPB-212ENST00000511198 PLP2Q04941 152 aa7.17□□□□□ -1.26
GYPB-212ENST00000511198 SPIRE1Q08AE8 756 aa7.17□□□□□ -1.26
GYPB-212ENST00000511198 RASA3Q14644 834 aa7.17□□□□□ -1.26
GYPB-212ENST00000511198 AMOTQ4VCS5 1084 aa7.17□□□□□ -1.26
GYPB-212ENST00000511198 LCE5AQ5TCM9 118 aa7.17□□□□□ -1.26
GYPB-212ENST00000511198 RAET1EQ8TD07 263 aa7.17□□□□□ -1.26
GYPB-212ENST00000511198 IPPKQ9H8X2 491 aa7.17□□□□□ -1.26
GYPB-212ENST00000511198 DNAH12Q6ZR08 3092 aa7.17□□□□□ -1.26
GYPB-212ENST00000511198 DUOX1Q9NRD9 1551 aa7.16□□□□□ -1.26
GYPB-212ENST00000511198 UBR2Q8IWV8 1755 aa7.16□□□□□ -1.26
GYPB-212ENST00000511198 TRBV23-1A0A0A0MS06 115 aa7.16□□□□□ -1.26
GYPB-212ENST00000511198 FAM221BA6H8Z2 402 aa7.16□□□□□ -1.26
GYPB-212ENST00000511198 MROH6A6NGR9 719 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms