RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 ECHDC2Q86YB7 292 aa11.43□□□□□ -0.58
NR1I3-227ENST00000510951 GPT2Q8TD30 523 aa11.43□□□□□ -0.58
NR1I3-227ENST00000510951 APOL6Q9BWW8 343 aa11.43□□□□□ -0.58
NR1I3-227ENST00000510951 TRIM6Q9C030 488 aaPredicted RBP11.43□□□□□ -0.58
NR1I3-227ENST00000510951 IKZF4Q9H2S9 585 aa11.43□□□□□ -0.58
NR1I3-227ENST00000510951 SLC39A2Q9NP94 309 aa11.43□□□□□ -0.58
NR1I3-227ENST00000510951 CHST12Q9NRB3 414 aa11.43□□□□□ -0.58
NR1I3-227ENST00000510951 C1orf112Q9NSG2 853 aa11.43□□□□□ -0.58
NR1I3-227ENST00000510951 FAM105AQ9NUU6 356 aa11.43□□□□□ -0.58
NR1I3-227ENST00000510951 KCNG1Q9UIX4 513 aa11.43□□□□□ -0.58
NR1I3-227ENST00000510951 HOOK1Q9UJC3 728 aaKnown RBP11.43□□□□□ -0.58
NR1I3-227ENST00000510951 LRFN2Q9ULH4 789 aa11.43□□□□□ -0.58
NR1I3-227ENST00000510951 TBX20Q9UMR3 447 aa11.43□□□□□ -0.58
NR1I3-227ENST00000510951 PVALEFA0A1B0GWK0 134 aa11.42□□□□□ -0.58
NR1I3-227ENST00000510951 TISP43B9A030 160 aa11.42□□□□□ -0.58
NR1I3-227ENST00000510951 HNRNPDLO14979 420 aaKnown RBP11.42□□□□□ -0.58
NR1I3-227ENST00000510951 N4BP3O15049 544 aa11.42□□□□□ -0.58
NR1I3-227ENST00000510951 PPP1R37O75864 691 aa11.42□□□□□ -0.58
NR1I3-227ENST00000510951 FGFR1P11362 822 aa11.42□□□□□ -0.58
NR1I3-227ENST00000510951 MCM4P33991 863 aa11.42□□□□□ -0.58
NR1I3-227ENST00000510951 MATR3P43243 847 aaKnown RBP eCLIP11.42□□□□□ -0.58
NR1I3-227ENST00000510951 LIG4P49917 911 aa11.42□□□□□ -0.58
NR1I3-227ENST00000510951 GATMP50440 423 aa11.42□□□□□ -0.58
NR1I3-227ENST00000510951 GTF2BQ00403 316 aa11.42□□□□□ -0.58
NR1I3-227ENST00000510951 EHHADHQ08426 723 aa11.42□□□□□ -0.58
NR1I3-227ENST00000510951 L1TD1Q5T7N2 865 aaKnown RBP11.42□□□□□ -0.58
NR1I3-227ENST00000510951 SLC27A1Q6PCB7 646 aa11.42□□□□□ -0.58
NR1I3-227ENST00000510951 ZBTB33Q86T24 672 aa11.42□□□□□ -0.58
NR1I3-227ENST00000510951 NPAS4Q8IUM7 802 aa11.42□□□□□ -0.58
NR1I3-227ENST00000510951 MAP4K3Q8IVH8 894 aa11.42□□□□□ -0.58
NR1I3-227ENST00000510951 HERC6Q8IVU3 1022 aa11.42□□□□□ -0.58
NR1I3-227ENST00000510951 NELFCDQ8IXH7 590 aa11.42□□□□□ -0.58
NR1I3-227ENST00000510951 KIAA0895Q8NCT3 520 aa11.42□□□□□ -0.58
NR1I3-227ENST00000510951 SLC17A8Q8NDX2 589 aa11.42□□□□□ -0.58
NR1I3-227ENST00000510951 LPPQ93052 612 aa11.42□□□□□ -0.58
NR1I3-227ENST00000510951 SMARCE1Q969G3 411 aa11.42□□□□□ -0.58
NR1I3-227ENST00000510951 CCDC47Q96A33 483 aaKnown RBP11.42□□□□□ -0.58
NR1I3-227ENST00000510951 CCDC51Q96ER9 411 aa11.42□□□□□ -0.58
NR1I3-227ENST00000510951 ADPGKQ9BRR6 497 aa11.42□□□□□ -0.58
NR1I3-227ENST00000510951 NXF3Q9H4D5 531 aaKnown RBP11.42□□□□□ -0.58
NR1I3-227ENST00000510951 GDAQ9Y2T3 454 aa11.42□□□□□ -0.58
NR1I3-227ENST00000510951 HES2Q9Y543 173 aa11.42□□□□□ -0.58
NR1I3-227ENST00000510951 PCDHB2Q9Y5E7 798 aa11.42□□□□□ -0.58
NR1I3-227ENST00000510951 ZMYM2Q9UBW7 1377 aa11.41□□□□□ -0.58
NR1I3-227ENST00000510951 MYO9BQ13459 2157 aa11.41□□□□□ -0.58
NR1I3-227ENST00000510951 COL4A4P53420 1690 aaPredicted RBP11.41□□□□□ -0.58
NR1I3-227ENST00000510951 A0A1B0GUA9 196 aa11.41□□□□□ -0.58
NR1I3-227ENST00000510951 MEIS3P2A8K0S8 358 aa11.41□□□□□ -0.58
NR1I3-227ENST00000510951 SMC2O95347 1197 aa11.41□□□□□ -0.58
NR1I3-227ENST00000510951 MYOGP15173 224 aa11.41□□□□□ -0.58
NR1I3-227ENST00000510951 ATF7P17544 494 aaPredicted RBP11.41□□□□□ -0.58
NR1I3-227ENST00000510951 PBX2P40425 430 aa11.41□□□□□ -0.58
NR1I3-227ENST00000510951 RAB27AP51159 221 aa11.41□□□□□ -0.58
NR1I3-227ENST00000510951 STK4Q13043 487 aa11.41□□□□□ -0.58
NR1I3-227ENST00000510951 ALCAMQ13740 583 aa11.41□□□□□ -0.58
NR1I3-227ENST00000510951 PAN2Q504Q3 1202 aaKnown RBP11.41□□□□□ -0.58
NR1I3-227ENST00000510951 ISM2Q6H9L7 571 aa11.41□□□□□ -0.58
NR1I3-227ENST00000510951 STXBP4Q6ZWJ1 553 aa11.41□□□□□ -0.58
NR1I3-227ENST00000510951 SYCP3Q8IZU3 236 aa11.41□□□□□ -0.58
NR1I3-227ENST00000510951 HVCN1Q96D96 273 aa11.41□□□□□ -0.58
NR1I3-227ENST00000510951 ZBTB45Q96K62 511 aaPredicted RBP11.41□□□□□ -0.58
NR1I3-227ENST00000510951 ACCSQ96QU6 501 aa11.41□□□□□ -0.58
NR1I3-227ENST00000510951 YME1L1Q96TA2 773 aa11.41□□□□□ -0.58
NR1I3-227ENST00000510951 ACO2Q99798 780 aaKnown RBP11.41□□□□□ -0.58
NR1I3-227ENST00000510951 TCHPQ9BT92 498 aa11.41□□□□□ -0.58
NR1I3-227ENST00000510951 ZBED2Q9BTP6 218 aa11.41□□□□□ -0.58
NR1I3-227ENST00000510951 CDT1Q9H211 546 aa11.41□□□□□ -0.58
NR1I3-227ENST00000510951 CLSTN2Q9H4D0 955 aa11.41□□□□□ -0.58
NR1I3-227ENST00000510951 ST6GALNAC4Q9H4F1 302 aa11.41□□□□□ -0.58
NR1I3-227ENST00000510951 TNFSF13BQ9Y275 285 aa11.41□□□□□ -0.58
NR1I3-227ENST00000510951 IPPQ9Y573 584 aa11.41□□□□□ -0.58
NR1I3-227ENST00000510951 PCDHB7Q9Y5E2 793 aa11.41□□□□□ -0.58
NR1I3-227ENST00000510951 PCDHA5Q9Y5H7 936 aa11.41□□□□□ -0.58
NR1I3-227ENST00000510951 LAMA2P24043 3122 aaKnown RBP11.41□□□□□ -0.58
NR1I3-227ENST00000510951 LAMA3Q16787 3333 aa11.4□□□□□ -0.58
NR1I3-227ENST00000510951 A0A0U1RQF3 1178 aa11.4□□□□□ -0.58
NR1I3-227ENST00000510951 A0A1W2PPC1 479 aa11.4□□□□□ -0.58
NR1I3-227ENST00000510951 BIN1O00499 593 aa11.4□□□□□ -0.58
NR1I3-227ENST00000510951 EIF3DO15371 548 aaKnown RBP eCLIP11.4□□□□□ -0.58
NR1I3-227ENST00000510951 TLL1O43897 1013 aa11.4□□□□□ -0.58
NR1I3-227ENST00000510951 RHOBTB3O94955 611 aa11.4□□□□□ -0.58
NR1I3-227ENST00000510951 GJB5O95377 273 aa11.4□□□□□ -0.58
NR1I3-227ENST00000510951 STAG3L1P0CL83 205 aa11.4□□□□□ -0.58
NR1I3-227ENST00000510951 ABCD1P33897 745 aa11.4□□□□□ -0.58
NR1I3-227ENST00000510951 OSTNP61366 133 aa11.4□□□□□ -0.58
NR1I3-227ENST00000510951 NOLC1Q14978 699 aaKnown RBP eCLIP11.4□□□□□ -0.58
NR1I3-227ENST00000510951 DCAF4L1Q3SXM0 396 aa11.4□□□□□ -0.58
NR1I3-227ENST00000510951 SLC39A4Q6P5W5 647 aa11.4□□□□□ -0.58
NR1I3-227ENST00000510951 MPZL3Q6UWV2 235 aa11.4□□□□□ -0.58
NR1I3-227ENST00000510951 ZPBP2Q6X784 338 aa11.4□□□□□ -0.58
NR1I3-227ENST00000510951 EPM2AIP1Q7L775 607 aaPredicted RBP11.4□□□□□ -0.58
NR1I3-227ENST00000510951 SMYD4Q8IYR2 804 aaPredicted RBP11.4□□□□□ -0.58
NR1I3-227ENST00000510951 CEP120Q8N960 986 aa11.4□□□□□ -0.58
NR1I3-227ENST00000510951 SMG8Q8ND04 991 aaKnown RBP11.4□□□□□ -0.58
NR1I3-227ENST00000510951 SCFD1Q8WVM8 642 aa11.4□□□□□ -0.58
NR1I3-227ENST00000510951 TOP1MTQ969P6 601 aa11.4□□□□□ -0.58
NR1I3-227ENST00000510951 STRA6Q9BX79 667 aa11.4□□□□□ -0.58
NR1I3-227ENST00000510951 NUP62CLQ9H1M0 184 aa11.4□□□□□ -0.58
NR1I3-227ENST00000510951 TMEM161AQ9NX61 479 aa11.4□□□□□ -0.58
NR1I3-227ENST00000510951 EXOC7Q9UPT5 735 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms