RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 PLEKHG3A1L390 1219 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 NLRP10Q86W26 655 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 USP33Q8TEY7 942 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 CEP44Q9C0F1 390 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 CYB5D1Q6P9G0 228 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 AP1M1Q9BXS5 423 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 ADA2Q9NZK5 511 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 BTBD7Q9P203 1132 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 TNPO2O14787 897 aaKnown RBP8.85□□□□□ -0.99
HTT-208ENST00000510626 ROR2Q01974 943 aaKnown RBP8.85□□□□□ -0.99
HTT-208ENST00000510626 IL17RAQ96F46 866 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 DDX28Q9NUL7 540 aaKnown RBP8.85□□□□□ -0.99
HTT-208ENST00000510626 SCN3BQ9NY72 215 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 LIMA1Q9UHB6 759 aaKnown RBP8.85□□□□□ -0.99
HTT-208ENST00000510626 CCZ1BP86790 482 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 CCZ1P86791 482 aaPredicted RBP8.85□□□□□ -0.99
HTT-208ENST00000510626 TMEM154Q6P9G4 183 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 C1orf131Q8NDD1 294 aaKnown RBP8.85□□□□□ -0.99
HTT-208ENST00000510626 MMS19Q96T76 1030 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 C1orf50Q9BV19 199 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 TM9SF1O15321 606 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 SOX5P35711 763 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 ANGPT1Q15389 498 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 TRAPPC3LQ5T215 181 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 GPR141Q7Z602 305 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 PARP3Q9Y6F1 533 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 ANGPT2O15123 496 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 NOD2Q9HC29 1040 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 PDE5AO76074 875 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 WDR47O94967 919 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 PDIA5Q14554 519 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 RABGAP1LQ5R372 815 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 MYL10Q9BUA6 226 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 ASCC2Q9H1I8 757 aaPredicted RBP8.85□□□□□ -0.99
HTT-208ENST00000510626 FBXL5Q9UKA1 691 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 MYO1DO94832 1006 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 BRAFP15056 766 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 CTCFP49711 727 aaPredicted RBP8.85□□□□□ -0.99
HTT-208ENST00000510626 KCNQ4P56696 695 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 VSNL1P62760 191 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 BTNL9Q6UXG8 535 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 DCAF4Q8WV16 495 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 SMYD2Q9NRG4 433 aa8.85□□□□□ -0.99
HTT-208ENST00000510626 MTERF3Q96E29 417 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 APPL1Q9UKG1 709 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 USP17L12C9JPN9 530 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 USP17L21D6R901 530 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 BIRC5O15392 142 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 CALB2P22676 271 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 RPL22P35268 128 aaKnown RBP8.84□□□□□ -0.99
HTT-208ENST00000510626 ADD2P35612 726 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 YWHAHQ04917 246 aaPredicted RBP8.84□□□□□ -0.99
HTT-208ENST00000510626 TGFBRAP1Q8WUH2 860 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 QKIQ96PU8 341 aaKnown RBP eCLIP8.84□□□□□ -0.994e-6■□□□□ 8.3
HTT-208ENST00000510626 CORO1CQ9ULV4 474 aaPredicted RBP8.84□□□□□ -0.99
HTT-208ENST00000510626 PSAPP07602 524 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 RXRGP48443 463 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 SKOR1P84550 965 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 DDB1Q16531 1140 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 WHRNQ9P202 907 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 WDR35Q9P2L0 1181 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 TOMM70O94826 608 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 TNFAIP2Q03169 654 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 SNX17Q15036 470 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 USH1GQ495M9 461 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 ZNF564Q8TBZ8 553 aaPredicted RBP8.84□□□□□ -0.99
HTT-208ENST00000510626 CAVIN3Q969G5 261 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 NCLNQ969V3 563 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 LEMD3Q9Y2U8 911 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 COMMD3-BMI1R4GMX3 469 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 NCAPD2Q15021 1401 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 KNOP1Q1ED39 458 aaKnown RBP8.84□□□□□ -0.99
HTT-208ENST00000510626 MINDY2Q8NBR6 621 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 FAM167AQ96KS9 214 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 NDEL1Q9GZM8 345 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 SAP30BPQ9UHR5 308 aaKnown RBP8.84□□□□□ -0.99
HTT-208ENST00000510626 ADAM30Q9UKF2 790 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 CHN1P15882 459 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 NAB2Q15742 525 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 CCDC137Q6PK04 289 aaKnown RBP8.84□□□□□ -0.99
HTT-208ENST00000510626 CLMNQ96JQ2 1002 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 VPS33BQ9H267 617 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 TRPC7Q9HCX4 862 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 CPSF3Q9UKF6 684 aaKnown RBP8.84□□□□□ -0.99
HTT-208ENST00000510626 KATNA1O75449 491 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 ALDH1B1P30837 517 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 CENPCQ03188 943 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 EDRF1Q3B7T1 1238 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 ARHGAP22Q7Z5H3 698 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 CCSER1Q9C0I3 900 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 CYP21A2P08686 494 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 BEGAINQ9BUH8 593 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 VPS9D1Q9Y2B5 631 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 UNC13AQ9UPW8 1703 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 ORC4O43929 436 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 TRAPPC11Q7Z392 1133 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 ARHGEF1Q92888 912 aaKnown RBP8.84□□□□□ -0.99
HTT-208ENST00000510626 BHMTQ93088 406 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 FAM20AQ96MK3 541 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 BFARQ9NZS9 450 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms