RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 NRP1O14786 923 aa17.13■□□□□ 0.33
SMAD5-205ENST00000509297 C1RP00736 705 aa17.13■□□□□ 0.33
SMAD5-205ENST00000509297 DSC1Q08554 894 aa17.13■□□□□ 0.33
SMAD5-205ENST00000509297 CAPSQ13938 189 aa17.13■□□□□ 0.33
SMAD5-205ENST00000509297 RARS2Q5T160 578 aaKnown RBP17.13■□□□□ 0.33
SMAD5-205ENST00000509297 CABP7Q86V35 215 aa17.13■□□□□ 0.33
SMAD5-205ENST00000509297 COLGALT2Q8IYK4 626 aa17.13■□□□□ 0.33
SMAD5-205ENST00000509297 HACE1Q8IYU2 909 aa17.13■□□□□ 0.33
SMAD5-205ENST00000509297 RNF168Q8IYW5 571 aaPredicted RBP17.13■□□□□ 0.33
SMAD5-205ENST00000509297 PLCD3Q8N3E9 789 aa17.13■□□□□ 0.33
SMAD5-205ENST00000509297 KLHL5Q96PQ7 755 aa17.13■□□□□ 0.33
SMAD5-205ENST00000509297 SFXN1Q9H9B4 322 aa17.13■□□□□ 0.33
SMAD5-205ENST00000509297 MRPL17Q9NRX2 175 aaKnown RBP17.13■□□□□ 0.33
SMAD5-205ENST00000509297 CDH22Q9UJ99 828 aa17.13■□□□□ 0.33
SMAD5-205ENST00000509297 GIT1Q9Y2X7 761 aa17.13■□□□□ 0.33
SMAD5-205ENST00000509297 C2CD4DB7Z1M9 353 aa17.12■□□□□ 0.33
SMAD5-205ENST00000509297 INO80B-WBP1J3KQ70 363 aa17.12■□□□□ 0.33
SMAD5-205ENST00000509297 JAK2O60674 1132 aa17.12■□□□□ 0.33
SMAD5-205ENST00000509297 POMCP01189 267 aa17.12■□□□□ 0.33
SMAD5-205ENST00000509297 SOD2P04179 222 aa17.12■□□□□ 0.33
SMAD5-205ENST00000509297 CNPP09543 421 aaKnown RBP17.12■□□□□ 0.33
SMAD5-205ENST00000509297 GLRA2P23416 452 aa17.12■□□□□ 0.33
SMAD5-205ENST00000509297 TXKP42681 527 aa17.12■□□□□ 0.33
SMAD5-205ENST00000509297 CLCN4P51793 760 aa17.12■□□□□ 0.33
SMAD5-205ENST00000509297 NUBP1P53384 320 aa17.12■□□□□ 0.33
SMAD5-205ENST00000509297 PTPN5P54829 565 aa17.12■□□□□ 0.33
SMAD5-205ENST00000509297 ORC2Q13416 577 aaPredicted RBP17.12■□□□□ 0.33
SMAD5-205ENST00000509297 MTMR3Q13615 1198 aa17.12■□□□□ 0.33
SMAD5-205ENST00000509297 GPR149Q86SP6 731 aa17.12■□□□□ 0.33
SMAD5-205ENST00000509297 ZBTB33Q86T24 672 aa17.12■□□□□ 0.33
SMAD5-205ENST00000509297 ALYREFQ86V81 257 aaKnown RBP17.12■□□□□ 0.33
SMAD5-205ENST00000509297 GPR65Q8IYL9 337 aa17.12■□□□□ 0.33
SMAD5-205ENST00000509297 C12orf76Q8N812 135 aaPredicted RBP17.12■□□□□ 0.33
SMAD5-205ENST00000509297 KREMEN2Q8NCW0 462 aa17.12■□□□□ 0.33
SMAD5-205ENST00000509297 ASAP3Q8TDY4 903 aa17.12■□□□□ 0.33
SMAD5-205ENST00000509297 CCDC43Q96MW1 224 aaKnown RBP17.12■□□□□ 0.33
SMAD5-205ENST00000509297 HERC2P3Q9BVR0 1158 aa17.12■□□□□ 0.33
SMAD5-205ENST00000509297 EIF2AQ9BY44 585 aaKnown RBP17.12■□□□□ 0.33
SMAD5-205ENST00000509297 RHOBTB2Q9BYZ6 727 aa17.12■□□□□ 0.33
SMAD5-205ENST00000509297 TUFT1Q9NNX1 390 aa17.12■□□□□ 0.33
SMAD5-205ENST00000509297 TSHZ2Q9NRE2 1034 aa17.12■□□□□ 0.33
SMAD5-205ENST00000509297 MARCH5Q9NX47 278 aa17.12■□□□□ 0.33
SMAD5-205ENST00000509297 DAXXQ9UER7 740 aaPredicted RBP17.12■□□□□ 0.33
SMAD5-205ENST00000509297 A0A1B0GUA9 196 aa17.11■□□□□ 0.33
SMAD5-205ENST00000509297 WNT7AO00755 349 aa17.11■□□□□ 0.33
SMAD5-205ENST00000509297 SPATA31C1P0DKV0 1188 aa17.11■□□□□ 0.33
SMAD5-205ENST00000509297 ARF4P18085 180 aaPredicted RBP17.11■□□□□ 0.33
SMAD5-205ENST00000509297 MRE11P49959 708 aa17.11■□□□□ 0.33
SMAD5-205ENST00000509297 SAFBQ15424 915 aaKnown RBP eCLIP17.11■□□□□ 0.33
SMAD5-205ENST00000509297 IER5LQ5T953 404 aa17.11■□□□□ 0.33
SMAD5-205ENST00000509297 CYP26C1Q6V0L0 522 aa17.11■□□□□ 0.33
SMAD5-205ENST00000509297 C15orf39Q6ZRI6 1047 aa17.11■□□□□ 0.33
SMAD5-205ENST00000509297 TDRD5Q8NAT2 981 aaKnown RBP17.11■□□□□ 0.33
SMAD5-205ENST00000509297 MCPH1Q8NEM0 835 aa17.11■□□□□ 0.33
SMAD5-205ENST00000509297 PRSS33Q8NF86 280 aa17.11■□□□□ 0.33
SMAD5-205ENST00000509297 CMASQ8NFW8 434 aaPredicted RBP17.11■□□□□ 0.33
SMAD5-205ENST00000509297 PRIMPOLQ96LW4 560 aa17.11■□□□□ 0.33
SMAD5-205ENST00000509297 RPS6KC1Q96S38 1066 aa17.11■□□□□ 0.33
SMAD5-205ENST00000509297 GAD1Q99259 594 aa17.11■□□□□ 0.33
SMAD5-205ENST00000509297 RNF39Q9H2S5 420 aa17.11■□□□□ 0.33
SMAD5-205ENST00000509297 DPP7Q9UHL4 492 aa17.11■□□□□ 0.33
SMAD5-205ENST00000509297 DBR1Q9UK59 544 aaKnown RBP17.11■□□□□ 0.33
SMAD5-205ENST00000509297 NR1I2O75469 434 aa17.1■□□□□ 0.33
SMAD5-205ENST00000509297 PAPLNO95428 1278 aa17.1■□□□□ 0.33
SMAD5-205ENST00000509297 URODP06132 367 aa17.1■□□□□ 0.33
SMAD5-205ENST00000509297 KLRC2P26717 231 aa17.1■□□□□ 0.33
SMAD5-205ENST00000509297 MLH1P40692 756 aa17.1■□□□□ 0.33
SMAD5-205ENST00000509297 ST3GAL1Q11201 340 aa17.1■□□□□ 0.33
SMAD5-205ENST00000509297 SLC27A1Q6PCB7 646 aa17.1■□□□□ 0.33
SMAD5-205ENST00000509297 PPP4R3CPQ6ZMV5 832 aa17.1■□□□□ 0.33
SMAD5-205ENST00000509297 PIGOQ8TEQ8 1089 aa17.1■□□□□ 0.33
SMAD5-205ENST00000509297 CPB2Q96IY4 423 aa17.1■□□□□ 0.33
SMAD5-205ENST00000509297 LLPHQ9BRT6 129 aaKnown RBP17.1■□□□□ 0.33
SMAD5-205ENST00000509297 POLR3CQ9BUI4 534 aaPredicted RBP17.1■□□□□ 0.33
SMAD5-205ENST00000509297 TRIM6Q9C030 488 aaPredicted RBP17.1■□□□□ 0.33
SMAD5-205ENST00000509297 POLR3FQ9H1D9 316 aaPredicted RBP17.1■□□□□ 0.33
SMAD5-205ENST00000509297 TMEM60Q9H2L4 133 aa17.1■□□□□ 0.33
SMAD5-205ENST00000509297 RXFP1Q9HBX9 757 aa17.1■□□□□ 0.33
SMAD5-205ENST00000509297 POTEMA6NI47 508 aa17.09■□□□□ 0.33
SMAD5-205ENST00000509297 ADH1AP07327 375 aa17.09■□□□□ 0.33
SMAD5-205ENST00000509297 WEE2P0C1S8 567 aa17.09■□□□□ 0.33
SMAD5-205ENST00000509297 SP100P23497 879 aaPredicted RBP17.09■□□□□ 0.33
SMAD5-205ENST00000509297 AVPR2P30518 371 aa17.09■□□□□ 0.33
SMAD5-205ENST00000509297 FAM187BQ17R55 369 aa17.09■□□□□ 0.33
SMAD5-205ENST00000509297 KIAA0319Q5VV43 1072 aa17.09■□□□□ 0.33
SMAD5-205ENST00000509297 CDCA2Q69YH5 1023 aaPredicted RBP17.09■□□□□ 0.33
SMAD5-205ENST00000509297 ELMSAN1Q6PJG2 1045 aa17.09■□□□□ 0.33
SMAD5-205ENST00000509297 TMC5Q6UXY8 1006 aa17.09■□□□□ 0.33
SMAD5-205ENST00000509297 CATSPER3Q86XQ3 398 aa17.09■□□□□ 0.33
SMAD5-205ENST00000509297 GSTCDQ8NEC7 633 aa17.09■□□□□ 0.33
SMAD5-205ENST00000509297 HDAC7Q8WUI4 952 aa17.09■□□□□ 0.33
SMAD5-205ENST00000509297 ZFP42Q96MM3 310 aa17.09■□□□□ 0.33
SMAD5-205ENST00000509297 NACC1Q96RE7 527 aa17.09■□□□□ 0.33
SMAD5-205ENST00000509297 COLEC11Q9BWP8 271 aa17.09■□□□□ 0.33
SMAD5-205ENST00000509297 IRF2BPLQ9H1B7 796 aa17.09■□□□□ 0.33
SMAD5-205ENST00000509297 CHST7Q9NS84 486 aa17.09■□□□□ 0.33
SMAD5-205ENST00000509297 LIMCH1Q9UPQ0 1083 aa17.09■□□□□ 0.33
SMAD5-205ENST00000509297 PRG3Q9Y2Y8 225 aaPredicted RBP17.09■□□□□ 0.33
SMAD5-205ENST00000509297 HES2Q9Y543 173 aa17.09■□□□□ 0.33
SMAD5-205ENST00000509297 KMT2EQ8IZD2 1858 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms