RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 AXLP30530 894 aa11.36□□□□□ -0.59
RFC1-211ENST00000509084 CRYBB1P53674 252 aaPredicted RBP11.36□□□□□ -0.59
RFC1-211ENST00000509084 MRPS6P82932 125 aaKnown RBP11.36□□□□□ -0.59
RFC1-211ENST00000509084 ZNF200P98182 395 aaPredicted RBP11.36□□□□□ -0.59
RFC1-211ENST00000509084 PPP2R3AQ06190 1150 aa11.36□□□□□ -0.59
RFC1-211ENST00000509084 PRPF4BQ13523 1007 aaKnown RBP11.36□□□□□ -0.59
RFC1-211ENST00000509084 C1orf53Q5VUE5 145 aa11.36□□□□□ -0.59
RFC1-211ENST00000509084 LRRC55Q6ZSA7 311 aa11.36□□□□□ -0.59
RFC1-211ENST00000509084 APBB1IPQ7Z5R6 666 aaPredicted RBP11.36□□□□□ -0.59
RFC1-211ENST00000509084 CAGE1Q8TC20 777 aa11.36□□□□□ -0.59
RFC1-211ENST00000509084 CELF4Q9BZC1 486 aaKnown RBP11.36□□□□□ -0.59
RFC1-211ENST00000509084 MCOLN1Q9GZU1 580 aa11.36□□□□□ -0.59
RFC1-211ENST00000509084 ADAMTS10Q9H324 1103 aa11.36□□□□□ -0.59
RFC1-211ENST00000509084 METTL14Q9HCE5 456 aaKnown RBP11.36□□□□□ -0.59
RFC1-211ENST00000509084 KIAA1586Q9HCI6 787 aa11.36□□□□□ -0.59
RFC1-211ENST00000509084 SAMSN1Q9NSI8 373 aaKnown RBP11.36□□□□□ -0.59
RFC1-211ENST00000509084 FRMD4BQ9Y2L6 1034 aa11.36□□□□□ -0.59
RFC1-211ENST00000509084 HTTP42858 3142 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 KCNJ18B7U540 433 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 N4BP3O15049 544 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 CBFA2T2O43439 604 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 B4GALT4O60513 344 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 TOM1L1O75674 476 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 LDHAP00338 332 aaKnown RBP11.35□□□□□ -0.59
RFC1-211ENST00000509084 SERPINC1P01008 464 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 DARSP14868 501 aaKnown RBP11.35□□□□□ -0.59
RFC1-211ENST00000509084 PSMC2P35998 433 aaKnown RBP11.35□□□□□ -0.59
RFC1-211ENST00000509084 CDK7P50613 346 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 MARSP56192 900 aaKnown RBP11.35□□□□□ -0.59
RFC1-211ENST00000509084 RBL2Q08999 1139 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 ADAM9Q13443 819 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 BFSP2Q13515 415 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 KCNJ12Q14500 433 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 SNX17Q15036 470 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 KYAT1Q16773 422 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 TMEM132AQ24JP5 1023 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 KIZQ2M2Z5 673 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 CCDC40Q4G0X9 1142 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 FILIP1LQ4L180 1135 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 TCP11X2Q5H9J9 407 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 FAM43BQ6ZT52 329 aaPredicted RBP11.35□□□□□ -0.59
RFC1-211ENST00000509084 XXYLT1Q8NBI6 393 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 PPP1R13LQ8WUF5 828 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 CNOT6LQ96LI5 555 aaKnown RBP11.35□□□□□ -0.59
RFC1-211ENST00000509084 OSMRQ99650 979 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 ADPGKQ9BRR6 497 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 DMAC2Q9NW81 257 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 TNFSF13BQ9Y275 285 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 CDY2AQ9Y6F7 541 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 STYXL1Q9Y6J8 313 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 SQORQ9Y6N5 450 aa11.35□□□□□ -0.59
RFC1-211ENST00000509084 CLIC2O15247 247 aa11.34□□□□□ -0.59
RFC1-211ENST00000509084 CLDN3O15551 220 aa11.34□□□□□ -0.59
RFC1-211ENST00000509084 EXOC3O60645 756 aa11.34□□□□□ -0.59
RFC1-211ENST00000509084 COL6A1P12109 1028 aa11.34□□□□□ -0.59
RFC1-211ENST00000509084 THPOP40225 353 aa11.34□□□□□ -0.59
RFC1-211ENST00000509084 MATR3P43243 847 aaKnown RBP eCLIP11.34□□□□□ -0.59
RFC1-211ENST00000509084 MTIF2P46199 727 aaKnown RBP11.34□□□□□ -0.59
RFC1-211ENST00000509084 PLCB2Q00722 1185 aa11.34□□□□□ -0.59
RFC1-211ENST00000509084 ENPEPQ07075 957 aa11.34□□□□□ -0.59
RFC1-211ENST00000509084 MGAT3Q09327 533 aa11.34□□□□□ -0.59
RFC1-211ENST00000509084 TMEM62Q0P6H9 643 aa11.34□□□□□ -0.59
RFC1-211ENST00000509084 TRIM71Q2Q1W2 868 aaKnown RBP11.34□□□□□ -0.59
RFC1-211ENST00000509084 FAM26DQ5JW98 314 aa11.34□□□□□ -0.59
RFC1-211ENST00000509084 ATF7IP2Q5U623 682 aa11.34□□□□□ -0.59
RFC1-211ENST00000509084 CEP135Q66GS9 1140 aa11.34□□□□□ -0.59
RFC1-211ENST00000509084 MPZL3Q6UWV2 235 aa11.34□□□□□ -0.59
RFC1-211ENST00000509084 TSHZ1Q6ZSZ6 1077 aa11.34□□□□□ -0.59
RFC1-211ENST00000509084 CATSPER4Q7RTX7 472 aa11.34□□□□□ -0.59
RFC1-211ENST00000509084 FRMD5Q7Z6J6 570 aa11.34□□□□□ -0.59
RFC1-211ENST00000509084 USP37Q86T82 979 aa11.34□□□□□ -0.59
RFC1-211ENST00000509084 FAM126BQ8IXS8 530 aa11.34□□□□□ -0.59
RFC1-211ENST00000509084 USP38Q8NB14 1042 aa11.34□□□□□ -0.59
RFC1-211ENST00000509084 POMGNT1Q8WZA1 660 aa11.34□□□□□ -0.59
RFC1-211ENST00000509084 CCDC51Q96ER9 411 aa11.34□□□□□ -0.59
RFC1-211ENST00000509084 ZNF668Q96K58 619 aaPredicted RBP11.34□□□□□ -0.59
RFC1-211ENST00000509084 TOX2Q96NM4 488 aa11.34□□□□□ -0.59
RFC1-211ENST00000509084 PPP1R16BQ96T49 567 aa11.34□□□□□ -0.59
RFC1-211ENST00000509084 ACO2Q99798 780 aaKnown RBP11.34□□□□□ -0.59
RFC1-211ENST00000509084 TARS2Q9BW92 718 aaKnown RBP11.34□□□□□ -0.59
RFC1-211ENST00000509084 SENP6Q9GZR1 1112 aaPredicted RBP11.34□□□□□ -0.59
RFC1-211ENST00000509084 HSD3B7Q9H2F3 369 aa11.34□□□□□ -0.59
RFC1-211ENST00000509084 C11orf49Q9H6J7 331 aa11.34□□□□□ -0.59
RFC1-211ENST00000509084 TRMT13Q9NUP7 481 aaKnown RBP11.34□□□□□ -0.59
RFC1-211ENST00000509084 HSPBP1Q9NZL4 362 aa11.34□□□□□ -0.59
RFC1-211ENST00000509084 LIMA1Q9UHB6 759 aaKnown RBP11.34□□□□□ -0.59
RFC1-211ENST00000509084 GINS2Q9Y248 185 aa11.34□□□□□ -0.59
RFC1-211ENST00000509084 TRIP12Q14669 1992 aaPredicted RBP11.34□□□□□ -0.59
RFC1-211ENST00000509084 DCDC2CA8MYV0 355 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 ANKRD63C9JTQ0 380 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 TSPAN1O60635 241 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 PARNO95453 639 aaKnown RBP11.33□□□□□ -0.6
RFC1-211ENST00000509084 CD4P01730 458 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 KRT13P13646 458 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 PROZP22891 400 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 CYP2J2P51589 502 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 FANCCQ00597 558 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 POU5F1Q01860 360 aaKnown RBP11.33□□□□□ -0.6
RFC1-211ENST00000509084 MCL1Q07820 350 aa11.33□□□□□ -0.6
RFC1-211ENST00000509084 NOLC1Q14978 699 aaKnown RBP eCLIP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms