RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 ANKLE1Q8NAG6 615 aa16.21■□□□□ 0.19
SNCAIP-211ENST00000509023 ANKRD20A12PQ8NF67 263 aa16.21■□□□□ 0.19
SNCAIP-211ENST00000509023 TMEM174Q8WUU8 243 aa16.21■□□□□ 0.19
SNCAIP-211ENST00000509023 ZBTB45Q96K62 511 aaPredicted RBP16.21■□□□□ 0.19
SNCAIP-211ENST00000509023 ACO2Q99798 780 aaKnown RBP16.21■□□□□ 0.19
SNCAIP-211ENST00000509023 CNTNAP2Q9UHC6 1331 aa16.21■□□□□ 0.19
SNCAIP-211ENST00000509023 EXOC3O60645 756 aa16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 TOM1L1O75674 476 aa16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 GNA14O95837 355 aa16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 GARTP22102 1010 aa16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 MATR3P43243 847 aaKnown RBP eCLIP16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 KRT31Q15323 416 aa16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 TRIM71Q2Q1W2 868 aaKnown RBP16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 SLFN12LQ6IEE8 588 aa16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 TSHZ1Q6ZSZ6 1077 aa16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 FAM126BQ8IXS8 530 aa16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 TRIM5Q9C035 493 aa16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 LIMA1Q9UHB6 759 aaKnown RBP16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 FRMD4BQ9Y2L6 1034 aa16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 STYXL1Q9Y6J8 313 aa16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 SLC16A3O15427 465 aaKnown RBP16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 TSPAN1O60635 241 aa16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 CHRNA1P02708 482 aa16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 EPB41P11171 864 aaKnown RBP16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 COL6A1P12109 1028 aa16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 MTIF2P46199 727 aaKnown RBP16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 MGAT3Q09327 533 aa16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 ATF7IP2Q5U623 682 aa16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 SLC39A5Q6ZMH5 540 aa16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 APTXQ7Z2E3 356 aaKnown RBP16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 XXYLT1Q8NBI6 393 aa16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 ZSWIM2Q8NEG5 633 aa16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 SAAL1Q96ER3 474 aa16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 HAPLN2Q9GZV7 340 aa16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 TAB2Q9NYJ8 693 aa16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 IFNKQ9P0W0 207 aa16.2■□□□□ 0.18
SNCAIP-211ENST00000509023 CLDN3O15551 220 aa16.19■□□□□ 0.18
SNCAIP-211ENST00000509023 ARF4P18085 180 aaPredicted RBP16.19■□□□□ 0.18
SNCAIP-211ENST00000509023 SFPQP23246 707 aaKnown RBP eCLIP16.19■□□□□ 0.18
SNCAIP-211ENST00000509023 PSMC2P35998 433 aaKnown RBP16.19■□□□□ 0.18
SNCAIP-211ENST00000509023 UBASH3AP57075 661 aa16.19■□□□□ 0.18
SNCAIP-211ENST00000509023 PCBP1Q15365 356 aaKnown RBP eCLIP16.19■□□□□ 0.18
SNCAIP-211ENST00000509023 CATSPER4Q7RTX7 472 aa16.19■□□□□ 0.18
SNCAIP-211ENST00000509023 CDR2LQ86X02 465 aaPredicted RBP16.19■□□□□ 0.18
SNCAIP-211ENST00000509023 RDH13Q8NBN7 331 aa16.19■□□□□ 0.18
SNCAIP-211ENST00000509023 CPB2Q96IY4 423 aa16.19■□□□□ 0.18
SNCAIP-211ENST00000509023 TUBGCP2Q9BSJ2 902 aa16.19■□□□□ 0.18
SNCAIP-211ENST00000509023 TCHPQ9BT92 498 aa16.19■□□□□ 0.18
SNCAIP-211ENST00000509023 MKNK1Q9BUB5 465 aa16.19■□□□□ 0.18
SNCAIP-211ENST00000509023 MROH7Q68CQ1 1323 aa16.19■□□□□ 0.18
SNCAIP-211ENST00000509023 A0A0B4J269 797 aa16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 GOLGA8IPA6NC78 632 aa16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 GOLGA8JA6NMD2 632 aa16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 PQBP1O60828 265 aaKnown RBP16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 CAND2O75155 1236 aa16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 ADCY5O95622 1261 aa16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 MARSP56192 900 aaKnown RBP16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 ZBTB33Q86T24 672 aa16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 FAM186BQ8IYM0 893 aa16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 NAP1L5Q96NT1 182 aaPredicted RBP16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 MSTO1Q9BUK6 570 aa16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 XPO4Q9C0E2 1151 aaKnown RBP16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 PTPRHQ9HD43 1115 aa16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 AGO2Q9UKV8 859 aaKnown RBP16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 TNFSF13BQ9Y275 285 aa16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 LRRC10BA6NIK2 292 aa16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 RBAK-RBAKDNI3L0D1 243 aa16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 ABLIM1O14639 778 aa16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 CD4P01730 458 aa16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 HARSP12081 509 aaKnown RBP16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 CKBP12277 381 aa16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 PRKCSHP14314 528 aaPredicted RBP16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 PROZP22891 400 aa16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 COPB1P53618 953 aaKnown RBP16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 ZNF568Q3ZCX4 644 aa16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 ZNF618Q5T7W0 954 aa16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 EEF1DP3Q658K8 133 aa16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 MPZL3Q6UWV2 235 aa16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 FRMD5Q7Z6J6 570 aa16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 GPD1LQ8N335 351 aa16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 ANP32BQ92688 251 aaKnown RBP16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 PAWRQ96IZ0 340 aaKnown RBP16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 VPS16Q9H269 839 aa16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 PDZD7Q9H5P4 517 aa16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 C11orf49Q9H6J7 331 aa16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 ARMCX3Q9UH62 379 aaPredicted RBP16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 NOC2LQ9Y3T9 749 aaKnown RBP16.18■□□□□ 0.18
SNCAIP-211ENST00000509023 KIAA0391O15091 583 aaKnown RBP16.17■□□□□ 0.18
SNCAIP-211ENST00000509023 ZNF75DP51815 510 aa16.17■□□□□ 0.18
SNCAIP-211ENST00000509023 MCL1Q07820 350 aa16.17■□□□□ 0.18
SNCAIP-211ENST00000509023 NOLC1Q14978 699 aaKnown RBP eCLIP16.17■□□□□ 0.18
SNCAIP-211ENST00000509023 SNRNP35Q16560 246 aaKnown RBP16.17■□□□□ 0.18
SNCAIP-211ENST00000509023 FAM228AQ86W67 206 aa16.17■□□□□ 0.18
SNCAIP-211ENST00000509023 CBWD2Q8IUF1 395 aa16.17■□□□□ 0.18
SNCAIP-211ENST00000509023 FBXL18Q96ME1 805 aa16.17■□□□□ 0.18
SNCAIP-211ENST00000509023 FAM213AQ9BRX8 229 aa16.17■□□□□ 0.18
SNCAIP-211ENST00000509023 NOC4LQ9BVI4 516 aaKnown RBP16.17■□□□□ 0.18
SNCAIP-211ENST00000509023 METTL14Q9HCE5 456 aaKnown RBP16.17■□□□□ 0.18
SNCAIP-211ENST00000509023 A0A1B0GTH6 734 aa16.17■□□□□ 0.18
SNCAIP-211ENST00000509023 A0A1B0GUA9 196 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms