RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 PCDHA1Q9Y5I3 950 aa15.35■□□□□ 0.05
TRIM41-204ENST00000508930 SLIT2O94813 1529 aa15.35■□□□□ 0.05
TRIM41-204ENST00000508930 CCDC88AQ3V6T2 1871 aa15.35■□□□□ 0.05
TRIM41-204ENST00000508930 FOXN3O00409 490 aaPredicted RBP15.35■□□□□ 0.05
TRIM41-204ENST00000508930 RRP1BQ14684 758 aaKnown RBP15.35■□□□□ 0.05
TRIM41-204ENST00000508930 ZC3H3Q8IXZ2 948 aaKnown RBP15.35■□□□□ 0.05
TRIM41-204ENST00000508930 SLC30A5Q8TAD4 765 aa15.35■□□□□ 0.05
TRIM41-204ENST00000508930 RUSC1Q9BVN2 902 aa15.35■□□□□ 0.05
TRIM41-204ENST00000508930 KCNMB3Q9NPA1 279 aa15.35■□□□□ 0.05
TRIM41-204ENST00000508930 APEX2Q9UBZ4 518 aa15.35■□□□□ 0.05
TRIM41-204ENST00000508930 PAPPAQ13219 1627 aa15.35■□□□□ 0.05
TRIM41-204ENST00000508930 TCRBV7S2A1N4TA0A589 114 aa15.35■□□□□ 0.05
TRIM41-204ENST00000508930 GTPBP10A4D1E9 387 aaKnown RBP15.35■□□□□ 0.05
TRIM41-204ENST00000508930 SNUPNO95149 360 aaKnown RBP15.35■□□□□ 0.05
TRIM41-204ENST00000508930 UNC5CO95185 931 aa15.35■□□□□ 0.05
TRIM41-204ENST00000508930 PPP4CP60510 307 aa15.35■□□□□ 0.05
TRIM41-204ENST00000508930 PPP1R18Q6NYC8 613 aa15.35■□□□□ 0.05
TRIM41-204ENST00000508930 NSMFQ6X4W1 530 aa15.35■□□□□ 0.05
TRIM41-204ENST00000508930 SMIM5Q71RC9 77 aa15.35■□□□□ 0.05
TRIM41-204ENST00000508930 CYFIP1Q7L576 1253 aa15.35■□□□□ 0.05
TRIM41-204ENST00000508930 RPUSD2Q8IZ73 545 aaKnown RBP15.35■□□□□ 0.05
TRIM41-204ENST00000508930 PIGOQ8TEQ8 1089 aa15.35■□□□□ 0.05
TRIM41-204ENST00000508930 MTMR4Q9NYA4 1195 aa15.35■□□□□ 0.05
TRIM41-204ENST00000508930 ANAPC5Q9UJX4 755 aa15.35■□□□□ 0.05
TRIM41-204ENST00000508930 ASTN1O14525 1302 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 MAPK13O15264 365 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 GJB6O95452 261 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 ATF2P15336 505 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 ATP4AP20648 1035 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 ZC2HC1CQ53FD0 456 aaPredicted RBP15.34■□□□□ 0.05
TRIM41-204ENST00000508930 CYP4F22Q6NT55 531 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 VSTM1Q6UX27 236 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 EPM2AIP1Q7L775 607 aaPredicted RBP15.34■□□□□ 0.05
TRIM41-204ENST00000508930 ANKRD35Q8N283 1001 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 SYT2Q8N9I0 419 aaPredicted RBP15.34■□□□□ 0.05
TRIM41-204ENST00000508930 RNPEPL1Q9HAU8 725 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 RASA4BC9J798 803 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 CLDN3O15551 220 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 RASA4O43374 803 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 GAS8O95995 478 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 RWDD2BP57060 319 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 RNASELQ05823 741 aaKnown RBP15.34■□□□□ 0.05
TRIM41-204ENST00000508930 SEPT7Q16181 437 aaKnown RBP15.34■□□□□ 0.05
TRIM41-204ENST00000508930 DPY19L2P1Q6NXN4 242 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 STXBP4Q6ZWJ1 553 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 LONP2Q86WA8 852 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 AGGF1Q8N302 714 aaeCLIP15.34■□□□□ 0.05
TRIM41-204ENST00000508930 ART4Q93070 314 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 GRAMD1AQ96CP6 724 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 BTBD6Q96KE9 485 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 WNT8AQ9H1J5 351 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 BCAS3Q9H6U6 928 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 A0A1B0GUL6 1792 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 LIN7AO14910 233 aaPredicted RBP15.34■□□□□ 0.05
TRIM41-204ENST00000508930 ZBTB5O15062 677 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 CHMP2AO43633 222 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 SPAG7O75391 227 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 ATP5HO75947 161 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 AKR1B1P15121 316 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 RASSF2P50749 326 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 MIGA2Q7L4E1 593 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 ZNF526Q8TF50 670 aaPredicted RBP15.34■□□□□ 0.05
TRIM41-204ENST00000508930 MAGEB18Q96M61 343 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 MYLK2Q9H1R3 596 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 NENFQ9UMX5 172 aa15.34■□□□□ 0.05
TRIM41-204ENST00000508930 ROBO3Q96MS0 1386 aa15.33■□□□□ 0.05
TRIM41-204ENST00000508930 GNAT1P11488 350 aa15.33■□□□□ 0.05
TRIM41-204ENST00000508930 CALB2P22676 271 aa15.33■□□□□ 0.05
TRIM41-204ENST00000508930 ZNF543Q08ER8 600 aa15.33■□□□□ 0.05
TRIM41-204ENST00000508930 DNAJC3Q13217 504 aa15.33■□□□□ 0.05
TRIM41-204ENST00000508930 ZFYVE27Q5T4F4 411 aa15.33■□□□□ 0.05
TRIM41-204ENST00000508930 ECHDC2Q86YB7 292 aa15.33■□□□□ 0.05
TRIM41-204ENST00000508930 TPH2Q8IWU9 490 aa15.33■□□□□ 0.05
TRIM41-204ENST00000508930 VCXQ9H320 206 aa15.33■□□□□ 0.05
TRIM41-204ENST00000508930 NKX1-2Q9UD57 310 aaPredicted RBP15.33■□□□□ 0.05
TRIM41-204ENST00000508930 KCNG1Q9UIX4 513 aa15.33■□□□□ 0.05
TRIM41-204ENST00000508930 OAS1P00973 400 aaKnown RBP15.33■□□□□ 0.04
TRIM41-204ENST00000508930 HOXD13P35453 343 aa15.33■□□□□ 0.04
TRIM41-204ENST00000508930 ABL2P42684 1182 aa15.33■□□□□ 0.04
TRIM41-204ENST00000508930 KCNQ4P56696 695 aa15.33■□□□□ 0.04
TRIM41-204ENST00000508930 ZRSR2Q15696 482 aaKnown RBP15.33■□□□□ 0.04
TRIM41-204ENST00000508930 CLEC4GQ6UXB4 293 aa15.33■□□□□ 0.04
TRIM41-204ENST00000508930 TEKT4Q8WW24 435 aa15.33■□□□□ 0.04
TRIM41-204ENST00000508930 ZNF653Q96CK0 615 aa15.33■□□□□ 0.04
TRIM41-204ENST00000508930 NYXQ9GZU5 481 aa15.33■□□□□ 0.04
TRIM41-204ENST00000508930 ZNF335Q9H4Z2 1342 aaPredicted RBP15.33■□□□□ 0.04
TRIM41-204ENST00000508930 DPPA5A6NC42 116 aa15.33■□□□□ 0.04
TRIM41-204ENST00000508930 TOM1O60784 492 aa15.33■□□□□ 0.04
TRIM41-204ENST00000508930 KRT15P19012 456 aa15.33■□□□□ 0.04
TRIM41-204ENST00000508930 MRPS35P82673 323 aaKnown RBP15.33■□□□□ 0.04
TRIM41-204ENST00000508930 TMEM154Q6P9G4 183 aa15.33■□□□□ 0.04
TRIM41-204ENST00000508930 ZNF365Q70YC5 407 aa15.33■□□□□ 0.04
TRIM41-204ENST00000508930 DLEC1Q9Y238 1755 aa15.33■□□□□ 0.04
TRIM41-204ENST00000508930 ATP8B3O60423 1300 aa15.33■□□□□ 0.04
TRIM41-204ENST00000508930 CTNNA2P26232 953 aa15.32■□□□□ 0.04
TRIM41-204ENST00000508930 SSR1P43307 286 aaKnown RBP15.32■□□□□ 0.04
TRIM41-204ENST00000508930 KLC1Q07866 573 aa15.32■□□□□ 0.04
TRIM41-204ENST00000508930 CBWD6Q4V339 395 aa15.32■□□□□ 0.04
TRIM41-204ENST00000508930 CBWD3Q5JTY5 395 aa15.32■□□□□ 0.04
TRIM41-204ENST00000508930 CBWD5Q5RIA9 395 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms