RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 LOC730098B7Z3J9 87 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 WNT7AO00755 349 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 TSPAN1O60635 241 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 SSBP05455 408 aaKnown RBP eCLIP11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 CTSAP10619 480 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 GLRA2P23416 452 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 ITIH3Q06033 890 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 CAPSQ13938 189 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 HERC4Q5GLZ8 1057 aaPredicted RBP11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 TTC38Q5R3I4 469 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 UBXN11Q5T124 520 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 SYCE2Q6PIF2 218 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 ZBTB33Q86T24 672 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 PPFIBP1Q86W92 1011 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 CATSPER3Q86XQ3 398 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 ZBTB8OSQ8IWT0 167 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 FBXO18Q8NFZ0 1043 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 ASAP3Q8TDY4 903 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 AUTS2Q8WXX7 1259 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 CPB2Q96IY4 423 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 MFSD14AQ96MC6 490 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 TMEM175Q9BSA9 504 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 POLR3CQ9BUI4 534 aaPredicted RBP11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 EMILIN2Q9BXX0 1053 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 EIF2AQ9BY44 585 aaKnown RBP11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 ZBP1Q9H171 429 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 CSRNP2Q9H175 543 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 S1PR5Q9H228 398 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 TSHZ2Q9NRE2 1034 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 METRNQ9UJH8 293 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 DBR1Q9UK59 544 aaKnown RBP11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 NR2E1Q9Y466 385 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 KIF3AQ9Y496 699 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 ARIH1Q9Y4X5 557 aaPredicted RBP11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 IPPQ9Y573 584 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 HCFC2Q9Y5Z7 792 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 DDHD2O94830 711 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 SPATA31C1P0DKV0 1188 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 KLRC2P26717 231 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 PLA2G5P39877 138 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 MTHFRP42898 656 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 OR1G1P47890 313 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 TRAPPC10P48553 1259 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 MBTD1Q05BQ5 628 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 ST3GAL1Q11201 340 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 KCNC3Q14003 757 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 ATAT1Q5SQI0 421 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 HAUS3Q68CZ6 603 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 PADI6Q6TGC4 694 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 CABP7Q86V35 215 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 TMEM173Q86WV6 379 aaPredicted RBP11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 IFNLR1Q8IU57 520 aaPredicted RBP11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 NOSTRINQ8IVI9 506 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 SMG8Q8ND04 991 aaKnown RBP11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 SUSD6Q92537 303 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 EDAQ92838 391 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 RIPOR3Q96MK2 946 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 NECTIN4Q96NY8 510 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 GAD1Q99259 594 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 COLEC11Q9BWP8 271 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 NFKBIZQ9BYH8 718 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 RAB34Q9BZG1 259 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 ADAM7Q9H2U9 754 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 UPF2Q9HAU5 1272 aaKnown RBP11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 MRPL17Q9NRX2 175 aaKnown RBP11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 DZANK1Q9NVP4 752 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 LRWD1Q9UFC0 647 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 PARP2Q9UGN5 583 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 SSX2IPQ9Y2D8 614 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 PRG3Q9Y2Y8 225 aaPredicted RBP11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 PCDHB13Q9Y5F0 798 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 MUC3AQ02505 3323 aa11.18□□□□□ -0.62
UBE2D3-227ENST00000508818 ARL5CA6NH57 179 aa11.17□□□□□ -0.62
UBE2D3-227ENST00000508818 NRP1O14786 923 aa11.17□□□□□ -0.62
UBE2D3-227ENST00000508818 ST18O60284 1047 aa11.17□□□□□ -0.62
UBE2D3-227ENST00000508818 MED24O75448 989 aa11.17□□□□□ -0.62
UBE2D3-227ENST00000508818 NPTXRO95502 500 aa11.17□□□□□ -0.62
UBE2D3-227ENST00000508818 URODP06132 367 aa11.17□□□□□ -0.62
UBE2D3-227ENST00000508818 ARF4P18085 180 aaPredicted RBP11.17□□□□□ -0.62
UBE2D3-227ENST00000508818 LIG1P18858 919 aa11.17□□□□□ -0.62
UBE2D3-227ENST00000508818 SP100P23497 879 aaPredicted RBP11.17□□□□□ -0.62
UBE2D3-227ENST00000508818 RPA1P27694 616 aa11.17□□□□□ -0.62
UBE2D3-227ENST00000508818 CCT6AP40227 531 aaKnown RBP11.17□□□□□ -0.62
UBE2D3-227ENST00000508818 MLH1P40692 756 aa11.17□□□□□ -0.62
UBE2D3-227ENST00000508818 RARS2Q5T160 578 aaKnown RBP11.17□□□□□ -0.62
UBE2D3-227ENST00000508818 KIAA1841Q6NSI8 718 aa11.17□□□□□ -0.62
UBE2D3-227ENST00000508818 SLC27A1Q6PCB7 646 aa11.17□□□□□ -0.62
UBE2D3-227ENST00000508818 ELMSAN1Q6PJG2 1045 aa11.17□□□□□ -0.62
UBE2D3-227ENST00000508818 POTEGQ6S5H5 508 aa11.17□□□□□ -0.62
UBE2D3-227ENST00000508818 DEPTORQ8TB45 409 aa11.17□□□□□ -0.62
UBE2D3-227ENST00000508818 C2orf40Q9H1Z8 148 aa11.17□□□□□ -0.62
UBE2D3-227ENST00000508818 GPRC5CQ9NQ84 441 aa11.17□□□□□ -0.62
UBE2D3-227ENST00000508818 PRMT7Q9NVM4 692 aaPredicted RBP11.17□□□□□ -0.62
UBE2D3-227ENST00000508818 GIT1Q9Y2X7 761 aa11.17□□□□□ -0.62
UBE2D3-227ENST00000508818 HES2Q9Y543 173 aa11.17□□□□□ -0.62
UBE2D3-227ENST00000508818 IRAK3Q9Y616 596 aa11.17□□□□□ -0.62
UBE2D3-227ENST00000508818 STK24Q9Y6E0 443 aa11.17□□□□□ -0.62
UBE2D3-227ENST00000508818 A0A1B0GUA9 196 aa11.16□□□□□ -0.62
UBE2D3-227ENST00000508818 C2CD2LO14523 706 aa11.16□□□□□ -0.62
UBE2D3-227ENST00000508818 B4GALT5O43286 388 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms