RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 GRIN1Q05586 938 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 KLF10Q13118 480 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 ODF1Q14990 250 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 INTS11Q5TA45 600 aaKnown RBP5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 B3GNT9Q6UX72 402 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 GALNT5Q7Z7M9 940 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 LMNTD2Q8IXW0 634 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 ZNF713Q8N859 430 aaPredicted RBP5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 SPATA5Q8NB90 893 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 CCT6BQ92526 530 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 RPGRQ92834 1020 aaKnown RBP5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 CCDC47Q96A33 483 aaKnown RBP5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 AIFM3Q96NN9 605 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 GNRHR2Q96P88 292 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 WRNIP1Q96S55 665 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 AP1M1Q9BXS5 423 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 PDGFDQ9GZP0 370 aaPredicted RBP5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 SMOC1Q9H4F8 434 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 IFT22Q9H7X7 185 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 PRKRIP1Q9H875 184 aaPredicted RBP5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 TRIM39Q9HCM9 518 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 ARHGEF4Q9NR80 690 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 SMC4Q9NTJ3 1288 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 MYOTQ9UBF9 498 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 ING1Q9UK53 422 aaPredicted RBP5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 GIT1Q9Y2X7 761 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 TESMINQ9Y4I5 508 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 TNPO3Q9Y5L0 923 aaKnown RBP5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 MAGED1Q9Y5V3 778 aaPredicted RBP5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 LRRFIP2Q9Y608 721 aaKnown RBP5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 SLC4A7Q9Y6M7 1214 aa5.04□□□□□ -1.6
SMARCA5-202ENST00000508573 ITIH6Q6UXX5 1313 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 TRBV23-1A0A0A0MS06 115 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 IQCA1LA6NCM1 817 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 M0R3H8 397 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 EYA2O00167 538 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 TOR1BO14657 336 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 MT-CO1P00395 513 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 SCG5P05408 212 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 RHCEP18577 417 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 CCND1P24385 295 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 UBA7P41226 1012 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 RECQLP46063 649 aaPredicted RBP5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 RHDQ02161 417 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 ZNF460Q14592 562 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 R3HDM1Q15032 1099 aaKnown RBP5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 HS1BP3Q53T59 392 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 DNAJC21Q5F1R6 531 aaKnown RBP5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 CRB2Q5IJ48 1285 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 EMC4Q5J8M3 183 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 TMEM240Q5SV17 173 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 GPATCH4Q5T3I0 446 aaKnown RBP5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 VPS53Q5VIR6 699 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 DENND5AQ6IQ26 1287 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 RPAINQ86UA6 219 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 ZNF227Q86WZ6 799 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 MYLK4Q86YV6 388 aaPredicted RBP5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 FAM43AQ8N2R8 423 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 OTUD6BQ8N6M0 293 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 ACRBPQ8NEB7 543 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 SLC7A14Q8TBB6 771 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 NSUN6Q8TEA1 469 aaKnown RBP5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 USP7Q93009 1102 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 GCC1Q96CN9 775 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 CDC6Q99741 560 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 JAM3Q9BX67 310 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 EPB41L1Q9H4G0 881 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 VTA1Q9NP79 307 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 TBC1D22BQ9NU19 505 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 ABCF2Q9UG63 623 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 ADAM29Q9UKF5 820 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 TTLL3Q9Y4R7 772 aa5.03□□□□□ -1.6
SMARCA5-202ENST00000508573 K7ESF4 209 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 M0R2C6 588 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 SLC27A2O14975 620 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 ZEB2O60315 1214 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 MAFKO60675 156 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 CKMP06732 381 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 PYGMP11217 842 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 FLT3P36888 993 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 PIK3CAP42336 1068 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 GRK6P43250 576 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 GLRBP48167 497 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 TM4SF4P48230 202 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 ERVK-21P61565 698 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 PFKPQ01813 784 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 PRKG2Q13237 762 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 GRM1Q13255 1194 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 SLC10A5Q5PT55 438 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 RETSATQ6NUM9 610 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 RBM12BQ8IXT5 1001 aaKnown RBP5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 CMTR2Q8IYT2 770 aaKnown RBP5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 LSMEM1Q8N8F7 131 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 TMEM145Q8NBT3 493 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 CLEC4DQ8WXI8 215 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 ISCA1Q9BUE6 129 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 KRTAP9-8Q9BYQ0 159 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 WDR12Q9GZL7 423 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms