RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 PCDHGA11Q9Y5H2 935 aa11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 ZMYM6O95789 1325 aa11.52□□□□□ -0.56
PDLIM5-210ENST00000508216 MACROD2A1Z1Q3 448 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 A6NJR5 290 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 SNTNA6NMZ2 147 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 UFL1O94874 794 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 SUN1O94901 812 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 YEATS4O95619 227 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 PAHP00439 452 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 FYNP06241 537 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 VCLP18206 1134 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 HOXD13P35453 343 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 EPS15P42566 896 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 CENPAP49450 140 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 PCYT1AP49585 367 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 NAA20P61599 178 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 RUNX1T1Q06455 604 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 C19orf57Q0VDD7 668 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 ACVR2BQ13705 512 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 GIT2Q14161 759 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 NR1I3Q14994 352 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 KLHL38Q2WGJ6 581 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 RNF43Q68DV7 783 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 ZNF600Q6ZNG1 722 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 INTS8Q75QN2 995 aaKnown RBP11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 SNX32Q86XE0 403 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 C16orf71Q8IYS4 520 aaPredicted RBP11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 FSIP1Q8NA03 581 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 EPS8L3Q8TE67 593 aaKnown RBP11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 ATXN2LQ8WWM7 1075 aaKnown RBP11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 SCG3Q8WXD2 468 aaKnown RBP11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 VTI1AQ96AJ9 217 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 HSPBAP1Q96EW2 488 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 SDF4Q9BRK5 362 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 SPZ1Q9BXG8 430 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 ADAM33Q9BZ11 813 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 TUT1Q9H6E5 874 aaKnown RBP11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 RNF14Q9UBS8 474 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 KCNN3Q9UGI6 736 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 RIMKLBQ9ULI2 386 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 TDRKHQ9Y2W6 561 aaKnown RBP11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 A0A1W2PP64 1363 aa11.52□□□□□ -0.57
PDLIM5-210ENST00000508216 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 VILLO15195 856 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 EYA4O95677 639 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 KCNA6P17658 529 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 IFNA8P32881 189 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 ADKP55263 362 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 KRT76Q01546 638 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 PDE4DQ08499 809 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 MRPL28Q13084 256 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 TRIM14Q14142 442 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 UBE3CQ15386 1083 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 MOGQ16653 247 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 ZNF658Q5TYW1 1059 aaPredicted RBP11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 C8orf74Q6P047 294 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 C4orf22Q6V702 233 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 GALNT7Q86SF2 657 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 CLVS1Q8IUQ0 354 aaPredicted RBP11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 CCDC82Q8N4S0 544 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 OTUD7AQ8TE49 926 aaPredicted RBP11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 GIPC3Q8TF64 312 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 FAM20AQ96MK3 541 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 PRICKLE1Q96MT3 831 aaPredicted RBP11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 AIFM3Q96NN9 605 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 GPATCH1Q9BRR8 931 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 STX18Q9P2W9 335 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 TNFRSF10DQ9UBN6 386 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 TROQ12816 1431 aaPredicted RBP11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 CUL7Q14999 1698 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 PLSCR1O15162 318 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 ICMTO60725 284 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 ZMYND10O75800 440 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 CHEK2O96017 543 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 CALM1P0DP23 149 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 CALM2P0DP24 149 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 CALM3P0DP25 149 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 ETS2P15036 469 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 CDH3P22223 829 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 HOXC13P31276 330 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 HAAOP46952 286 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 CCR3P51677 355 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 MLLT6P55198 1093 aaPredicted RBP11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 AP2B1P63010 937 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 SLC34A1Q06495 639 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 NFE2Q16621 373 aaPredicted RBP11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 WDR72Q3MJ13 1102 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 ZC2HC1CQ53FD0 456 aaPredicted RBP11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 FAM122CQ6P4D5 195 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 LRRC74BQ6ZQY2 392 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 MCM10Q7L590 875 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 FAM13CQ8NE31 585 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 TBC1D16Q8TBP0 767 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 CHPT1Q8WUD6 406 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 HS3ST6Q96QI5 342 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 PURBQ96QR8 312 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 MRPL1Q9BYD6 325 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 CCSER2Q9H7U1 834 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 FANCEQ9HB96 536 aa11.51□□□□□ -0.57
PDLIM5-210ENST00000508216 MOV10Q9HCE1 1003 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms