RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 DCDC2CA8MYV0 355 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 WDR46O15213 610 aaKnown RBP11.78□□□□□ -0.52
LIN54-207ENST00000508171 LYPLA2O95372 231 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 MMEP08473 750 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 DPEP1P16444 411 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 MAGEA9P43362 315 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 GPC5P78333 572 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 ALCAMQ13740 583 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 SNRNP35Q16560 246 aaKnown RBP11.78□□□□□ -0.52
LIN54-207ENST00000508171 FMNL3Q8IVF7 1028 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 RHOT2Q8IXI1 618 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 FAM71AQ8IYT1 594 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 MTMR14Q8NCE2 650 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 C1orf131Q8NDD1 294 aaKnown RBP11.78□□□□□ -0.52
LIN54-207ENST00000508171 TMEM174Q8WUU8 243 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 C18orf8Q96DM3 657 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 ZBED3Q96IU2 234 aaPredicted RBP11.78□□□□□ -0.52
LIN54-207ENST00000508171 FAM84AQ96KN4 292 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 RMDN3Q96TC7 470 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 TBC1D22BQ9NU19 505 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 NOCTQ9UK39 431 aaKnown RBP11.78□□□□□ -0.52
LIN54-207ENST00000508171 ATP8A1Q9Y2Q0 1164 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 TELO2Q9Y4R8 837 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 RIPK3Q9Y572 518 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 KIAA1217Q5T5P2 1943 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 DOCK5Q9H7D0 1870 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 P4HA2O15460 535 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 CALCAP01258 141 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 COMTP21964 271 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 CNGA1P29973 690 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 NCKAP1LP55160 1127 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 NSMFQ6X4W1 530 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 ANO5Q75V66 913 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 C4orf19Q8IY42 314 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 ERP44Q9BS26 406 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 EPN3Q9H201 632 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 FAM114A2Q9NRY5 505 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 TOPORSQ9NS56 1045 aaPredicted RBP11.78□□□□□ -0.52
LIN54-207ENST00000508171 DIS3Q9Y2L1 958 aaKnown RBP11.78□□□□□ -0.52
LIN54-207ENST00000508171 DAAM1Q9Y4D1 1078 aa11.78□□□□□ -0.52
LIN54-207ENST00000508171 A6NNZ2 444 aa11.77□□□□□ -0.52
LIN54-207ENST00000508171 RTN2O75298 545 aa11.77□□□□□ -0.52
LIN54-207ENST00000508171 NPTX2P47972 431 aa11.77□□□□□ -0.52
LIN54-207ENST00000508171 HADHBP55084 474 aaKnown RBP11.77□□□□□ -0.52
LIN54-207ENST00000508171 PSMC5P62195 406 aa11.77□□□□□ -0.52
LIN54-207ENST00000508171 TUBB8Q3ZCM7 444 aa11.77□□□□□ -0.52
LIN54-207ENST00000508171 DUPD1Q68J44 220 aa11.77□□□□□ -0.52
LIN54-207ENST00000508171 TMEM161BQ8NDZ6 487 aa11.77□□□□□ -0.52
LIN54-207ENST00000508171 AGBL3Q8NEM8 1001 aa11.77□□□□□ -0.52
LIN54-207ENST00000508171 BSNDQ8WZ55 320 aa11.77□□□□□ -0.52
LIN54-207ENST00000508171 PDCD2LQ9BRP1 358 aa11.77□□□□□ -0.52
LIN54-207ENST00000508171 ST6GALNAC4Q9H4F1 302 aa11.77□□□□□ -0.52
LIN54-207ENST00000508171 MYOZ2Q9NPC6 264 aa11.77□□□□□ -0.52
LIN54-207ENST00000508171 TBX20Q9UMR3 447 aa11.77□□□□□ -0.52
LIN54-207ENST00000508171 SNX24Q9Y343 169 aa11.77□□□□□ -0.52
LIN54-207ENST00000508171 TCRBV7S2A1N4TA0A589 114 aa11.77□□□□□ -0.53
LIN54-207ENST00000508171 TMOD1P28289 359 aa11.77□□□□□ -0.53
LIN54-207ENST00000508171 PEX5P50542 639 aa11.77□□□□□ -0.53
LIN54-207ENST00000508171 GHRHRQ02643 423 aa11.77□□□□□ -0.53
LIN54-207ENST00000508171 MTMR2Q13614 643 aa11.77□□□□□ -0.53
LIN54-207ENST00000508171 LLGL1Q15334 1064 aa11.77□□□□□ -0.53
LIN54-207ENST00000508171 PTGISQ16647 500 aa11.77□□□□□ -0.53
LIN54-207ENST00000508171 NIM1KQ8IY84 436 aa11.77□□□□□ -0.53
LIN54-207ENST00000508171 PARD3BQ8TEW8 1205 aa11.77□□□□□ -0.53
LIN54-207ENST00000508171 TEPSINQ96N21 525 aa11.77□□□□□ -0.53
LIN54-207ENST00000508171 FMO2Q99518 471 aa11.77□□□□□ -0.53
LIN54-207ENST00000508171 KIAA1683Q9H0B3 1180 aa11.77□□□□□ -0.53
LIN54-207ENST00000508171 PXMP2Q9NR77 195 aa11.77□□□□□ -0.53
LIN54-207ENST00000508171 ZDHHC18Q9NUE0 388 aa11.77□□□□□ -0.53
LIN54-207ENST00000508171 DENND3A2RUS2 1198 aa11.76□□□□□ -0.53
LIN54-207ENST00000508171 PYGMP11217 842 aa11.76□□□□□ -0.53
LIN54-207ENST00000508171 PLTPP55058 493 aa11.76□□□□□ -0.53
LIN54-207ENST00000508171 FMO1Q01740 532 aa11.76□□□□□ -0.53
LIN54-207ENST00000508171 SF3B2Q13435 895 aaKnown RBP11.76□□□□□ -0.53
LIN54-207ENST00000508171 RNF207Q6ZRF8 634 aa11.76□□□□□ -0.53
LIN54-207ENST00000508171 JAMLQ86YT9 394 aa11.76□□□□□ -0.53
LIN54-207ENST00000508171 PRELID2Q8N945 189 aa11.76□□□□□ -0.53
LIN54-207ENST00000508171 DHX38Q92620 1227 aaKnown RBP11.76□□□□□ -0.53
LIN54-207ENST00000508171 LPAR1Q92633 364 aa11.76□□□□□ -0.53
LIN54-207ENST00000508171 NAP1L3Q99457 506 aaPredicted RBP11.76□□□□□ -0.53
LIN54-207ENST00000508171 ZSWIM1Q9BR11 485 aa11.76□□□□□ -0.53
LIN54-207ENST00000508171 RAB17Q9H0T7 212 aa11.76□□□□□ -0.53
LIN54-207ENST00000508171 PPANQ9NQ55 473 aaKnown RBP11.76□□□□□ -0.53
LIN54-207ENST00000508171 CNOT8Q9UFF9 292 aaKnown RBP11.76□□□□□ -0.53
LIN54-207ENST00000508171 NOVA2Q9UNW9 492 aaKnown RBP11.76□□□□□ -0.53
LIN54-207ENST00000508171 TRPC6Q9Y210 931 aa11.76□□□□□ -0.53
LIN54-207ENST00000508171 GOLGA6L10A0A0M3HER8 536 aa11.76□□□□□ -0.53
LIN54-207ENST00000508171 BAATQ14032 418 aaPredicted RBP11.76□□□□□ -0.53
LIN54-207ENST00000508171 ODF2Q5BJF6 829 aa11.76□□□□□ -0.53
LIN54-207ENST00000508171 ARHGEF16Q5VV41 709 aa11.76□□□□□ -0.53
LIN54-207ENST00000508171 C11orf63Q6NUN7 778 aa11.76□□□□□ -0.53
LIN54-207ENST00000508171 TTC27Q6P3X3 843 aa11.76□□□□□ -0.53
LIN54-207ENST00000508171 SLC39A4Q6P5W5 647 aa11.76□□□□□ -0.53
LIN54-207ENST00000508171 PACS2Q86VP3 889 aa11.76□□□□□ -0.53
LIN54-207ENST00000508171 HELQQ8TDG4 1101 aa11.76□□□□□ -0.53
LIN54-207ENST00000508171 TAS1R2Q8TE23 839 aa11.76□□□□□ -0.53
LIN54-207ENST00000508171 SHC3Q92529 594 aa11.76□□□□□ -0.53
LIN54-207ENST00000508171 TATDN2Q93075 761 aa11.76□□□□□ -0.53
LIN54-207ENST00000508171 CCT8L2Q96SF2 557 aa11.76□□□□□ -0.53
LIN54-207ENST00000508171 TXLNGYQ9BZA5 131 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms