RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 ZNF410Q86VK4 478 aa10.3□□□□□ -0.76
CAST-220ENST00000508117 ZNF280BQ86YH2 543 aa10.3□□□□□ -0.76
CAST-220ENST00000508117 RNF168Q8IYW5 571 aaPredicted RBP10.3□□□□□ -0.76
CAST-220ENST00000508117 NLRP7Q8WX94 980 aa10.3□□□□□ -0.76
CAST-220ENST00000508117 ATRIPQ8WXE1 791 aa10.3□□□□□ -0.76
CAST-220ENST00000508117 SMG7Q92540 1137 aaKnown RBP10.3□□□□□ -0.76
CAST-220ENST00000508117 MAP4K1Q92918 833 aa10.3□□□□□ -0.76
CAST-220ENST00000508117 LPPQ93052 612 aa10.3□□□□□ -0.76
CAST-220ENST00000508117 ZNF707Q96C28 371 aaPredicted RBP10.3□□□□□ -0.76
CAST-220ENST00000508117 PGBD4Q96DM1 585 aa10.3□□□□□ -0.76
CAST-220ENST00000508117 YTHDC1Q96MU7 727 aaKnown RBP10.3□□□□□ -0.76
CAST-220ENST00000508117 SCLT1Q96NL6 688 aa10.3□□□□□ -0.76
CAST-220ENST00000508117 HERC2P3Q9BVR0 1158 aa10.3□□□□□ -0.76
CAST-220ENST00000508117 SLC4A5Q9BY07 1137 aa10.3□□□□□ -0.76
CAST-220ENST00000508117 ADAM33Q9BZ11 813 aa10.3□□□□□ -0.76
CAST-220ENST00000508117 FOXQ1Q9C009 403 aa10.3□□□□□ -0.76
CAST-220ENST00000508117 ZSCAN32Q9NX65 697 aa10.3□□□□□ -0.76
CAST-220ENST00000508117 TCEAL9Q9UHQ7 104 aa10.3□□□□□ -0.76
CAST-220ENST00000508117 FAN1Q9Y2M0 1017 aa10.3□□□□□ -0.76
CAST-220ENST00000508117 SLC12A7Q9Y666 1083 aa10.3□□□□□ -0.76
CAST-220ENST00000508117 MYH15Q9Y2K3 1946 aa10.3□□□□□ -0.76
CAST-220ENST00000508117 CNTNAP2Q9UHC6 1331 aa10.3□□□□□ -0.76
CAST-220ENST00000508117 FAM208BQ5VWN6 2430 aa10.29□□□□□ -0.76
CAST-220ENST00000508117 ZFHX4Q86UP3 3567 aa10.29□□□□□ -0.76
CAST-220ENST00000508117 IGKV6-21A0A0C4DH24 114 aa10.29□□□□□ -0.76
CAST-220ENST00000508117 SMCO2A6NFE2 343 aa10.29□□□□□ -0.76
CAST-220ENST00000508117 MEIS3P2A8K0S8 358 aa10.29□□□□□ -0.76
CAST-220ENST00000508117 WDR64B1ANS9 1081 aa10.29□□□□□ -0.76
CAST-220ENST00000508117 TEX28O15482 410 aa10.29□□□□□ -0.76
CAST-220ENST00000508117 ZNF862O60290 1169 aa10.29□□□□□ -0.76
CAST-220ENST00000508117 TBC1D4O60343 1298 aa10.29□□□□□ -0.76
CAST-220ENST00000508117 RXRAP19793 462 aa10.29□□□□□ -0.76
CAST-220ENST00000508117 MRPL10Q7Z7H8 261 aaKnown RBP10.29□□□□□ -0.76
CAST-220ENST00000508117 SGMS1Q86VZ5 419 aa10.29□□□□□ -0.76
CAST-220ENST00000508117 CCDC82Q8N4S0 544 aa10.29□□□□□ -0.76
CAST-220ENST00000508117 URGCPQ8TCY9 931 aa10.29□□□□□ -0.76
CAST-220ENST00000508117 FAM193BQ96PV7 902 aaPredicted RBP10.29□□□□□ -0.76
CAST-220ENST00000508117 FAM126AQ9BYI3 521 aaPredicted RBP10.29□□□□□ -0.76
CAST-220ENST00000508117 NT5C3AQ9H0P0 336 aa10.29□□□□□ -0.76
CAST-220ENST00000508117 SPATA6Q9NWH7 488 aaPredicted RBP10.29□□□□□ -0.76
CAST-220ENST00000508117 BARHL2Q9NY43 387 aa10.29□□□□□ -0.76
CAST-220ENST00000508117 INPP5FQ9Y2H2 1132 aa10.29□□□□□ -0.76
CAST-220ENST00000508117 NUMBLQ9Y6R0 609 aa10.29□□□□□ -0.76
CAST-220ENST00000508117 ATRXP46100 2492 aa10.29□□□□□ -0.76
CAST-220ENST00000508117 CNTNAP5Q8WYK1 1306 aa10.29□□□□□ -0.76
CAST-220ENST00000508117 DOCK6Q96HP0 2047 aa10.28□□□□□ -0.76
CAST-220ENST00000508117 NRP1O14786 923 aa10.28□□□□□ -0.76
CAST-220ENST00000508117 RFPL2O75678 378 aa10.28□□□□□ -0.76
CAST-220ENST00000508117 DDHD2O94830 711 aa10.28□□□□□ -0.76
CAST-220ENST00000508117 SSBP05455 408 aaKnown RBP eCLIP10.28□□□□□ -0.76
CAST-220ENST00000508117 CHMLP26374 656 aa10.28□□□□□ -0.76
CAST-220ENST00000508117 CIITAP33076 1130 aa10.28□□□□□ -0.76
CAST-220ENST00000508117 GLUD2P49448 558 aa10.28□□□□□ -0.76
CAST-220ENST00000508117 AK2P54819 239 aa10.28□□□□□ -0.76
CAST-220ENST00000508117 GPC5P78333 572 aa10.28□□□□□ -0.76
CAST-220ENST00000508117 PRKCEQ02156 737 aa10.28□□□□□ -0.76
CAST-220ENST00000508117 DSG1Q02413 1049 aa10.28□□□□□ -0.76
CAST-220ENST00000508117 AGMOQ6ZNB7 445 aa10.28□□□□□ -0.76
CAST-220ENST00000508117 TRMT1LQ7Z2T5 733 aaKnown RBP10.28□□□□□ -0.76
CAST-220ENST00000508117 PHKBQ93100 1093 aa10.28□□□□□ -0.76
CAST-220ENST00000508117 CLDN23Q96B33 292 aa10.28□□□□□ -0.76
CAST-220ENST00000508117 ZNF668Q96K58 619 aaPredicted RBP10.28□□□□□ -0.76
CAST-220ENST00000508117 CEP89Q96ST8 783 aa10.28□□□□□ -0.76
CAST-220ENST00000508117 NELL2Q99435 816 aa10.28□□□□□ -0.76
CAST-220ENST00000508117 NIFKQ9BYG3 293 aaKnown RBP10.28□□□□□ -0.76
CAST-220ENST00000508117 PRKD2Q9BZL6 878 aa10.28□□□□□ -0.76
CAST-220ENST00000508117 GBP3Q9H0R5 595 aa10.28□□□□□ -0.76
CAST-220ENST00000508117 DISC1Q9NRI5 854 aa10.28□□□□□ -0.76
CAST-220ENST00000508117 RBM28Q9NW13 759 aaKnown RBP10.28□□□□□ -0.76
CAST-220ENST00000508117 SMG5Q9UPR3 1016 aaKnown RBP10.28□□□□□ -0.76
CAST-220ENST00000508117 PIN4Q9Y237 131 aaKnown RBP10.28□□□□□ -0.76
CAST-220ENST00000508117 PCDHB2Q9Y5E7 798 aa10.28□□□□□ -0.76
CAST-220ENST00000508117 CNOT1A5YKK6 2376 aaKnown RBP10.28□□□□□ -0.76
CAST-220ENST00000508117 A0A087WZ62 844 aa10.27□□□□□ -0.77
CAST-220ENST00000508117 ESYT2A0FGR8 921 aa10.27□□□□□ -0.77
CAST-220ENST00000508117 DCDC2BA2VCK2 349 aa10.27□□□□□ -0.77
CAST-220ENST00000508117 GOLGA8CPA6NN73 597 aa10.27□□□□□ -0.77
CAST-220ENST00000508117 SGSM2O43147 1006 aa10.27□□□□□ -0.77
CAST-220ENST00000508117 LRP3O75074 770 aa10.27□□□□□ -0.77
CAST-220ENST00000508117 LRRN2O75325 713 aa10.27□□□□□ -0.77
CAST-220ENST00000508117 CSDE1O75534 798 aaKnown RBP10.27□□□□□ -0.77
CAST-220ENST00000508117 SFNP31947 248 aa10.27□□□□□ -0.77
CAST-220ENST00000508117 RPS9P46781 194 aaKnown RBP10.27□□□□□ -0.77
CAST-220ENST00000508117 DNM2P50570 870 aa10.27□□□□□ -0.77
CAST-220ENST00000508117 PFKPQ01813 784 aa10.27□□□□□ -0.77
CAST-220ENST00000508117 CSTF1Q05048 431 aaKnown RBP10.27□□□□□ -0.77
CAST-220ENST00000508117 FUT2Q10981 343 aa10.27□□□□□ -0.77
CAST-220ENST00000508117 DRP2Q13474 957 aa10.27□□□□□ -0.77
CAST-220ENST00000508117 MLF2Q15773 248 aaPredicted RBP10.27□□□□□ -0.77
CAST-220ENST00000508117 LILRA6Q6PI73 481 aa10.27□□□□□ -0.77
CAST-220ENST00000508117 MTSS1LQ765P7 747 aa10.27□□□□□ -0.77
CAST-220ENST00000508117 FDXACB1Q9BRP7 624 aaPredicted RBP10.27□□□□□ -0.77
CAST-220ENST00000508117 RSAD1Q9HA92 442 aa10.27□□□□□ -0.77
CAST-220ENST00000508117 PIDD1Q9HB75 910 aa10.27□□□□□ -0.77
CAST-220ENST00000508117 UBN1Q9NPG3 1134 aa10.27□□□□□ -0.77
CAST-220ENST00000508117 PRMT8Q9NR22 394 aaPredicted RBP10.27□□□□□ -0.77
CAST-220ENST00000508117 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.27□□□□□ -0.77
CAST-220ENST00000508117 CHST7Q9NS84 486 aa10.27□□□□□ -0.77
CAST-220ENST00000508117 AGPAT5Q9NUQ2 364 aa10.27□□□□□ -0.77
CAST-220ENST00000508117 MARCH5Q9NX47 278 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms