RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 MECOMQ03112 1051 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 NR1H3Q13133 447 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 CUL3Q13618 768 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 GNPTABQ3T906 1256 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 TRIM68Q6AZZ1 485 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 CCDC137Q6PK04 289 aaKnown RBP17.05■□□□□ 0.32
SCLT1-208ENST00000506368 CEP128Q6ZU80 1094 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 VSIG1Q86XK7 387 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 C7orf43Q8WVR3 580 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 NUDCD1Q96RS6 583 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 TMEM47Q9BQJ4 181 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 STK33Q9BYT3 514 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 TRIM4Q9C037 500 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 ARHGEF10LQ9HCE6 1279 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 SIX2Q9NPC8 291 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 TYW1Q9NV66 732 aaKnown RBP17.05■□□□□ 0.32
SCLT1-208ENST00000506368 MCM9Q9NXL9 1143 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 DBR1Q9UK59 544 aaKnown RBP17.05■□□□□ 0.32
SCLT1-208ENST00000506368 USP20Q9Y2K6 914 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 POTEMA6NI47 508 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 SKIP12755 728 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 FGFR4P22455 802 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 MAN1A1P33908 653 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 RRP1BQ14684 758 aaKnown RBP17.05■□□□□ 0.32
SCLT1-208ENST00000506368 KNOP1Q1ED39 458 aaKnown RBP17.05■□□□□ 0.32
SCLT1-208ENST00000506368 KCNK18Q7Z418 384 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 ECHDC2Q86YB7 292 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 NELFCDQ8IXH7 590 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 ANKRD35Q8N283 1001 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 PRELID2Q8N945 189 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 UTP4Q969X6 686 aaKnown RBP17.05■□□□□ 0.32
SCLT1-208ENST00000506368 RMDN2Q96LZ7 410 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 PITPNM3Q9BZ71 974 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 STK24Q9Y6E0 443 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 TAF1P21675 1872 aa17.04■□□□□ 0.32
SCLT1-208ENST00000506368 BRAFP15056 766 aa17.04■□□□□ 0.32
SCLT1-208ENST00000506368 SP100P23497 879 aaPredicted RBP17.04■□□□□ 0.32
SCLT1-208ENST00000506368 SLCO1A2P46721 670 aa17.04■□□□□ 0.32
SCLT1-208ENST00000506368 GYG1P46976 350 aa17.04■□□□□ 0.32
SCLT1-208ENST00000506368 BMT2Q1RMZ1 405 aa17.04■□□□□ 0.32
SCLT1-208ENST00000506368 TMEM154Q6P9G4 183 aa17.04■□□□□ 0.32
SCLT1-208ENST00000506368 RPUSD2Q8IZ73 545 aaKnown RBP17.04■□□□□ 0.32
SCLT1-208ENST00000506368 LNX1Q8TBB1 728 aaPredicted RBP17.04■□□□□ 0.32
SCLT1-208ENST00000506368 LRRC37BQ96QE4 947 aa17.04■□□□□ 0.32
SCLT1-208ENST00000506368 GORASP1Q9BQQ3 440 aa17.04■□□□□ 0.32
SCLT1-208ENST00000506368 TUBB6Q9BUF5 446 aa17.04■□□□□ 0.32
SCLT1-208ENST00000506368 WNT8AQ9H1J5 351 aa17.04■□□□□ 0.32
SCLT1-208ENST00000506368 TLE6Q9H808 572 aa17.04■□□□□ 0.32
SCLT1-208ENST00000506368 UBN1Q9NPG3 1134 aa17.04■□□□□ 0.32
SCLT1-208ENST00000506368 GGT7Q9UJ14 662 aa17.04■□□□□ 0.32
SCLT1-208ENST00000506368 C2CD2Q9Y426 696 aa17.04■□□□□ 0.32
SCLT1-208ENST00000506368 PLA2G4BP0C869 781 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 ITIH2P19823 946 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 VHLP40337 213 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 ADCY7P51828 1080 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 RNASELQ05823 741 aaKnown RBP17.03■□□□□ 0.32
SCLT1-208ENST00000506368 LAMB3Q13751 1172 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 SPTY2D1Q68D10 685 aaPredicted RBP17.03■□□□□ 0.32
SCLT1-208ENST00000506368 FAM13CQ8NE31 585 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 C18orf8Q96DM3 657 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 CCDC77Q9BR77 488 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 SYT11Q9BT88 431 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 NYXQ9GZU5 481 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 CDC42EP4Q9H3Q1 356 aaKnown RBP17.03■□□□□ 0.32
SCLT1-208ENST00000506368 KCNK9Q9NPC2 374 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 OSGEPQ9NPF4 335 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 SAR1AQ9NR31 198 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 GCNT4Q9P109 453 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 BIN2Q9UBW5 565 aaPredicted RBP17.03■□□□□ 0.32
SCLT1-208ENST00000506368 LNPEPQ9UIQ6 1025 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 SLC37A4O43826 429 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 CDH16O75309 829 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 CYP2D6P10635 497 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 COILP38432 576 aaPredicted RBP17.03■□□□□ 0.32
SCLT1-208ENST00000506368 PTDSS1P48651 473 aaKnown RBP17.03■□□□□ 0.32
SCLT1-208ENST00000506368 OCRLQ01968 901 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 LRRC14Q15048 493 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 NFIL3Q16649 462 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 PTPROQ16827 1216 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 MUM1Q2TAK8 710 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 FBXO33Q7Z6M2 555 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 KCNV2Q8TDN2 545 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 KIFAP3Q92845 792 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 FAM136AQ96C01 138 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 IFT43Q96FT9 208 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 NUDT12Q9BQG2 462 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 ZSWIM1Q9BR11 485 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 PDP2Q9P2J9 529 aa17.03■□□□□ 0.32
SCLT1-208ENST00000506368 ECEL1O95672 775 aa17.02■□□□□ 0.32
SCLT1-208ENST00000506368 MGAT5Q09328 741 aa17.02■□□□□ 0.32
SCLT1-208ENST00000506368 GSTA3Q16772 222 aa17.02■□□□□ 0.32
SCLT1-208ENST00000506368 CHADLQ6NUI6 762 aa17.02■□□□□ 0.32
SCLT1-208ENST00000506368 GPBP1Q86WP2 473 aa17.02■□□□□ 0.32
SCLT1-208ENST00000506368 ZNF398Q8TD17 642 aa17.02■□□□□ 0.32
SCLT1-208ENST00000506368 MGARPQ8TDB4 240 aa17.02■□□□□ 0.32
SCLT1-208ENST00000506368 SYT15Q9BQS2 421 aa17.02■□□□□ 0.32
SCLT1-208ENST00000506368 PLVAPQ9BX97 442 aa17.02■□□□□ 0.32
SCLT1-208ENST00000506368 RIOX1Q9H6W3 641 aa17.02■□□□□ 0.32
SCLT1-208ENST00000506368 NKX1-2Q9UD57 310 aaPredicted RBP17.02■□□□□ 0.32
SCLT1-208ENST00000506368 NVLO15381 856 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms