RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 ANGPTL2Q9UKU9 493 aa8.02□□□□□ -1.13
VCAN-206ENST00000505615 WDFY3Q8IZQ1 3526 aa8.02□□□□□ -1.13
VCAN-206ENST00000505615 CA8P35219 290 aa8.01□□□□□ -1.13
VCAN-206ENST00000505615 METAP2P50579 478 aaKnown RBP eCLIP8.01□□□□□ -1.13
VCAN-206ENST00000505615 CLCN4P51793 760 aa8.01□□□□□ -1.13
VCAN-206ENST00000505615 STARD6P59095 220 aa8.01□□□□□ -1.13
VCAN-206ENST00000505615 SHC2P98077 582 aa8.01□□□□□ -1.13
VCAN-206ENST00000505615 DMWDQ09019 674 aa8.01□□□□□ -1.13
VCAN-206ENST00000505615 PTPN14Q15678 1187 aa8.01□□□□□ -1.13
VCAN-206ENST00000505615 C15orf39Q6ZRI6 1047 aa8.01□□□□□ -1.13
VCAN-206ENST00000505615 KIAA0319LQ8IZA0 1049 aa8.01□□□□□ -1.13
VCAN-206ENST00000505615 NME8Q8N427 588 aa8.01□□□□□ -1.13
VCAN-206ENST00000505615 GIMAP8Q8ND71 665 aaPredicted RBP8.01□□□□□ -1.13
VCAN-206ENST00000505615 CMASQ8NFW8 434 aaPredicted RBP8.01□□□□□ -1.13
VCAN-206ENST00000505615 NETO1Q8TDF5 533 aa8.01□□□□□ -1.13
VCAN-206ENST00000505615 LRRN4Q8WUT4 740 aa8.01□□□□□ -1.13
VCAN-206ENST00000505615 ESR2Q92731 530 aa8.01□□□□□ -1.13
VCAN-206ENST00000505615 GPRASP2Q96D09 838 aa8.01□□□□□ -1.13
VCAN-206ENST00000505615 SCARF2Q96GP6 870 aaPredicted RBP8.01□□□□□ -1.13
VCAN-206ENST00000505615 FAM227BQ96M60 508 aa8.01□□□□□ -1.13
VCAN-206ENST00000505615 POLMQ9NP87 494 aaPredicted RBP8.01□□□□□ -1.13
VCAN-206ENST00000505615 HELLSQ9NRZ9 838 aa8.01□□□□□ -1.13
VCAN-206ENST00000505615 MAD2L2Q9UI95 211 aa8.01□□□□□ -1.13
VCAN-206ENST00000505615 GINS2Q9Y248 185 aa8.01□□□□□ -1.13
VCAN-206ENST00000505615 GPSM3Q9Y4H4 160 aa8.01□□□□□ -1.13
VCAN-206ENST00000505615 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.01□□□□□ -1.13
VCAN-206ENST00000505615 LOC400499M0QZD8 3231 aa8.01□□□□□ -1.13
VCAN-206ENST00000505615 NOTCH4Q99466 2003 aa8.01□□□□□ -1.13
VCAN-206ENST00000505615 CLUHO75153 1309 aa8.01□□□□□ -1.13
VCAN-206ENST00000505615 SALL3Q9BXA9 1300 aa8.01□□□□□ -1.13
VCAN-206ENST00000505615 ITPR1Q14643 2758 aa8□□□□□ -1.13
VCAN-206ENST00000505615 LAMA1P25391 3075 aa8□□□□□ -1.13
VCAN-206ENST00000505615 PALM3A6NDB9 673 aaPredicted RBP8□□□□□ -1.13
VCAN-206ENST00000505615 KLRF2D3W0D1 207 aa8□□□□□ -1.13
VCAN-206ENST00000505615 ANHXE9PGG2 379 aa8□□□□□ -1.13
VCAN-206ENST00000505615 LAMTOR5O43504 91 aa8□□□□□ -1.13
VCAN-206ENST00000505615 CYTH3O43739 400 aa8□□□□□ -1.13
VCAN-206ENST00000505615 TBC1D4O60343 1298 aa8□□□□□ -1.13
VCAN-206ENST00000505615 ADH1AP07327 375 aa8□□□□□ -1.13
VCAN-206ENST00000505615 ITGB5P18084 799 aa8□□□□□ -1.13
VCAN-206ENST00000505615 POLGP54098 1239 aaPredicted RBP8□□□□□ -1.13
VCAN-206ENST00000505615 BCAR1P56945 870 aa8□□□□□ -1.13
VCAN-206ENST00000505615 CSTF1Q05048 431 aaKnown RBP8□□□□□ -1.13
VCAN-206ENST00000505615 HTR4Q13639 388 aa8□□□□□ -1.13
VCAN-206ENST00000505615 NONOQ15233 471 aaKnown RBP eCLIP8□□□□□ -1.13
VCAN-206ENST00000505615 CCDC178Q5BJE1 867 aa8□□□□□ -1.13
VCAN-206ENST00000505615 TMCO4Q5TGY1 634 aa8□□□□□ -1.13
VCAN-206ENST00000505615 DCLRE1AQ6PJP8 1040 aa8□□□□□ -1.13
VCAN-206ENST00000505615 DDX53Q86TM3 631 aaKnown RBP8□□□□□ -1.13
VCAN-206ENST00000505615 IQCA1Q86XH1 822 aa8□□□□□ -1.13
VCAN-206ENST00000505615 ECHDC2Q86YB7 292 aa8□□□□□ -1.13
VCAN-206ENST00000505615 HOMER1Q86YM7 354 aa8□□□□□ -1.13
VCAN-206ENST00000505615 SECISBP2LQ93073 1101 aaKnown RBP8□□□□□ -1.13
VCAN-206ENST00000505615 NXPE3Q969Y0 559 aa8□□□□□ -1.13
VCAN-206ENST00000505615 TMEM169Q96HH4 297 aa8□□□□□ -1.13
VCAN-206ENST00000505615 PIGSQ96S52 555 aa8□□□□□ -1.13
VCAN-206ENST00000505615 ZSCAN10Q96SZ4 725 aaPredicted RBP8□□□□□ -1.13
VCAN-206ENST00000505615 PPP1R16BQ96T49 567 aa8□□□□□ -1.13
VCAN-206ENST00000505615 OSMRQ99650 979 aa8□□□□□ -1.13
VCAN-206ENST00000505615 DDX23Q9BUQ8 820 aaKnown RBP8□□□□□ -1.13
VCAN-206ENST00000505615 RHOBTB2Q9BYZ6 727 aa8□□□□□ -1.13
VCAN-206ENST00000505615 RNF41Q9H4P4 317 aaPredicted RBP8□□□□□ -1.13
VCAN-206ENST00000505615 RIOX1Q9H6W3 641 aa8□□□□□ -1.13
VCAN-206ENST00000505615 DCTPP1Q9H773 170 aa8□□□□□ -1.13
VCAN-206ENST00000505615 WDR6Q9NNW5 1121 aaKnown RBP8□□□□□ -1.13
VCAN-206ENST00000505615 SPATA6Q9NWH7 488 aaPredicted RBP8□□□□□ -1.13
VCAN-206ENST00000505615 CUEDC1Q9NWM3 386 aaPredicted RBP8□□□□□ -1.13
VCAN-206ENST00000505615 ZSCAN32Q9NX65 697 aa8□□□□□ -1.13
VCAN-206ENST00000505615 IGSF10Q6WRI0 2623 aa8□□□□□ -1.13
VCAN-206ENST00000505615 ZBTB42B2RXF5 422 aa7.99□□□□□ -1.13
VCAN-206ENST00000505615 B4E1Z4 1266 aa7.99□□□□□ -1.13
VCAN-206ENST00000505615 GPR182O15218 404 aa7.99□□□□□ -1.13
VCAN-206ENST00000505615 LILRA1O75019 489 aa7.99□□□□□ -1.13
VCAN-206ENST00000505615 GPR32O75388 356 aa7.99□□□□□ -1.13
VCAN-206ENST00000505615 PAPLNO95428 1278 aa7.99□□□□□ -1.13
VCAN-206ENST00000505615 PROS1P07225 676 aa7.99□□□□□ -1.13
VCAN-206ENST00000505615 KLRC1P26715 233 aa7.99□□□□□ -1.13
VCAN-206ENST00000505615 GBP2P32456 591 aaPredicted RBP7.99□□□□□ -1.13
VCAN-206ENST00000505615 CRYBB1P53674 252 aaPredicted RBP7.99□□□□□ -1.13
VCAN-206ENST00000505615 MARSP56192 900 aaKnown RBP7.99□□□□□ -1.13
VCAN-206ENST00000505615 SPEM2Q0P670 501 aa7.99□□□□□ -1.13
VCAN-206ENST00000505615 GIT2Q14161 759 aa7.99□□□□□ -1.13
VCAN-206ENST00000505615 SEC23AQ15436 765 aa7.99□□□□□ -1.13
VCAN-206ENST00000505615 KIZQ2M2Z5 673 aa7.99□□□□□ -1.13
VCAN-206ENST00000505615 ODR4Q5SWX8 454 aa7.99□□□□□ -1.13
VCAN-206ENST00000505615 USP17L6PQ6QN14 398 aa7.99□□□□□ -1.13
VCAN-206ENST00000505615 NLRX1Q86UT6 975 aa7.99□□□□□ -1.13
VCAN-206ENST00000505615 PPFIBP1Q86W92 1011 aa7.99□□□□□ -1.13
VCAN-206ENST00000505615 ABI1Q8IZP0 508 aa7.99□□□□□ -1.13
VCAN-206ENST00000505615 HELQQ8TDG4 1101 aa7.99□□□□□ -1.13
VCAN-206ENST00000505615 ATRIPQ8WXE1 791 aa7.99□□□□□ -1.13
VCAN-206ENST00000505615 IGSF21Q96ID5 467 aa7.99□□□□□ -1.13
VCAN-206ENST00000505615 KLHL5Q96PQ7 755 aa7.99□□□□□ -1.13
VCAN-206ENST00000505615 ZNF395Q9H8N7 513 aaPredicted RBP7.99□□□□□ -1.13
VCAN-206ENST00000505615 PRMT8Q9NR22 394 aaPredicted RBP7.99□□□□□ -1.13
VCAN-206ENST00000505615 GMEB2Q9UKD1 530 aa7.99□□□□□ -1.13
VCAN-206ENST00000505615 MTF2Q9Y483 593 aaPredicted RBP7.99□□□□□ -1.13
VCAN-206ENST00000505615 UBIAD1Q9Y5Z9 338 aa7.99□□□□□ -1.13
VCAN-206ENST00000505615 CACNA1EQ15878 2313 aa7.98□□□□□ -1.13
VCAN-206ENST00000505615 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms