RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 C1RP00736 705 aa12.37□□□□□ -0.43
UBE2D3-219ENST00000505207 SOD2P04179 222 aa12.37□□□□□ -0.43
UBE2D3-219ENST00000505207 SSBP05455 408 aaKnown RBP eCLIP12.37□□□□□ -0.43
UBE2D3-219ENST00000505207 CNPP09543 421 aaKnown RBP12.37□□□□□ -0.43
UBE2D3-219ENST00000505207 KRT2P35908 639 aa12.37□□□□□ -0.43
UBE2D3-219ENST00000505207 OR1G1P47890 313 aa12.37□□□□□ -0.43
UBE2D3-219ENST00000505207 CLCN4P51793 760 aa12.37□□□□□ -0.43
UBE2D3-219ENST00000505207 AK2P54819 239 aa12.37□□□□□ -0.43
UBE2D3-219ENST00000505207 PTENP60484 403 aa12.37□□□□□ -0.43
UBE2D3-219ENST00000505207 SCRN1Q12765 414 aa12.37□□□□□ -0.43
UBE2D3-219ENST00000505207 TDGQ13569 410 aa12.37□□□□□ -0.43
UBE2D3-219ENST00000505207 ZNF579Q8NAF0 562 aaKnown RBP12.37□□□□□ -0.43
UBE2D3-219ENST00000505207 CMASQ8NFW8 434 aaPredicted RBP12.37□□□□□ -0.43
UBE2D3-219ENST00000505207 BCL7CQ8WUZ0 217 aaPredicted RBP12.37□□□□□ -0.43
UBE2D3-219ENST00000505207 HAS1Q92839 578 aa12.37□□□□□ -0.43
UBE2D3-219ENST00000505207 DYDC2Q96IM9 177 aa12.37□□□□□ -0.43
UBE2D3-219ENST00000505207 RPS6KC1Q96S38 1066 aa12.37□□□□□ -0.43
UBE2D3-219ENST00000505207 RGL1Q9NZL6 768 aa12.37□□□□□ -0.43
UBE2D3-219ENST00000505207 IGSF9Q9P2J2 1179 aa12.37□□□□□ -0.43
UBE2D3-219ENST00000505207 DAXXQ9UER7 740 aaPredicted RBP12.37□□□□□ -0.43
UBE2D3-219ENST00000505207 CDH22Q9UJ99 828 aa12.37□□□□□ -0.43
UBE2D3-219ENST00000505207 GIT1Q9Y2X7 761 aa12.37□□□□□ -0.43
UBE2D3-219ENST00000505207 CACNA1HO95180 2353 aa12.37□□□□□ -0.43
UBE2D3-219ENST00000505207 H0Y858 1186 aa12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 LILRB3O75022 631 aa12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 LYPLA2O95372 231 aa12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 ASGR2P07307 311 aa12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 XRCC6P12956 609 aaKnown RBP eCLIP12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 GLUD2P49448 558 aa12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 ANAPC15P60006 121 aa12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 CYP4A11Q02928 519 aa12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 CREMQ03060 361 aa12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 TRIM29Q14134 588 aa12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 CTTNQ14247 550 aaKnown RBP12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 CALCRLQ16602 461 aa12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 UBXN11Q5T124 520 aa12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 IFNLR1Q8IU57 520 aaPredicted RBP12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 GPR65Q8IYL9 337 aa12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 HDAC7Q8WUI4 952 aa12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 NXPE3Q969Y0 559 aa12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 PHOX2BQ99453 314 aa12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 EIF2AK1Q9BQI3 630 aaKnown RBP12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 HERC2P3Q9BVR0 1158 aa12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 RHOBTB2Q9BYZ6 727 aa12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 CSRNP2Q9H175 543 aa12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 MINDY3Q9H8M7 445 aa12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 BMP2KQ9NSY1 1161 aaPredicted RBP12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 FBXL21Q9UKT6 434 aa12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 PRG3Q9Y2Y8 225 aaPredicted RBP12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 IPPQ9Y573 584 aa12.36□□□□□ -0.43
UBE2D3-219ENST00000505207 WDFY4Q6ZS81 3184 aa12.35□□□□□ -0.43
UBE2D3-219ENST00000505207 MYO10Q9HD67 2058 aa12.35□□□□□ -0.43
UBE2D3-219ENST00000505207 ARL5CA6NH57 179 aa12.35□□□□□ -0.43
UBE2D3-219ENST00000505207 C2CD2LO14523 706 aa12.35□□□□□ -0.43
UBE2D3-219ENST00000505207 INPPL1O15357 1258 aa12.35□□□□□ -0.43
UBE2D3-219ENST00000505207 TSPAN1O60635 241 aa12.35□□□□□ -0.43
UBE2D3-219ENST00000505207 SLITRK3O94933 977 aa12.35□□□□□ -0.43
UBE2D3-219ENST00000505207 GLUD1P00367 558 aa12.35□□□□□ -0.43
UBE2D3-219ENST00000505207 PDGFBP01127 241 aaPredicted RBP12.35□□□□□ -0.43
UBE2D3-219ENST00000505207 KANK3Q6NY19 840 aa12.35□□□□□ -0.43
UBE2D3-219ENST00000505207 COLGALT2Q8IYK4 626 aa12.35□□□□□ -0.43
UBE2D3-219ENST00000505207 OXER1Q8TDS5 423 aa12.35□□□□□ -0.43
UBE2D3-219ENST00000505207 GAD1Q99259 594 aa12.35□□□□□ -0.43
UBE2D3-219ENST00000505207 RTP3Q9BQQ7 232 aa12.35□□□□□ -0.43
UBE2D3-219ENST00000505207 VN1R3Q9BXE9 311 aa12.35□□□□□ -0.43
UBE2D3-219ENST00000505207 NFKBIZQ9BYH8 718 aa12.35□□□□□ -0.43
UBE2D3-219ENST00000505207 PLEKHA4Q9H4M7 779 aa12.35□□□□□ -0.43
UBE2D3-219ENST00000505207 MAN1C1Q9NR34 630 aa12.35□□□□□ -0.43
UBE2D3-219ENST00000505207 WRAP73Q9P2S5 460 aaPredicted RBP12.35□□□□□ -0.43
UBE2D3-219ENST00000505207 CCDC195A0A1B0GUA6 201 aa12.34□□□□□ -0.43
UBE2D3-219ENST00000505207 PROB1E7EW31 1015 aa12.34□□□□□ -0.43
UBE2D3-219ENST00000505207 NEMFO60524 1076 aa12.34□□□□□ -0.43
UBE2D3-219ENST00000505207 RFX1P22670 979 aa12.34□□□□□ -0.43
UBE2D3-219ENST00000505207 MLH1P40692 756 aa12.34□□□□□ -0.43
UBE2D3-219ENST00000505207 AFF1P51825 1210 aaKnown RBP12.34□□□□□ -0.43
UBE2D3-219ENST00000505207 USP41Q3LFD5 358 aa12.34□□□□□ -0.43
UBE2D3-219ENST00000505207 SLC27A1Q6PCB7 646 aa12.34□□□□□ -0.43
UBE2D3-219ENST00000505207 SMG8Q8ND04 991 aaKnown RBP12.34□□□□□ -0.43
UBE2D3-219ENST00000505207 FLCNQ8NFG4 579 aa12.34□□□□□ -0.43
UBE2D3-219ENST00000505207 HSD17B14Q9BPX1 270 aa12.34□□□□□ -0.43
UBE2D3-219ENST00000505207 TTC12Q9H892 705 aaPredicted RBP12.34□□□□□ -0.43
UBE2D3-219ENST00000505207 KCNK12Q9HB15 430 aa12.34□□□□□ -0.43
UBE2D3-219ENST00000505207 PIDD1Q9HB75 910 aa12.34□□□□□ -0.43
UBE2D3-219ENST00000505207 RXFP1Q9HBX9 757 aa12.34□□□□□ -0.43
UBE2D3-219ENST00000505207 FAM86C1Q9NVL1 165 aa12.34□□□□□ -0.43
UBE2D3-219ENST00000505207 TPCN1Q9ULQ1 816 aa12.34□□□□□ -0.43
UBE2D3-219ENST00000505207 ZMYM2Q9UBW7 1377 aa12.33□□□□□ -0.44
UBE2D3-219ENST00000505207 STK25O00506 426 aa12.33□□□□□ -0.44
UBE2D3-219ENST00000505207 TEX28O15482 410 aa12.33□□□□□ -0.44
UBE2D3-219ENST00000505207 B4GALT3O60512 393 aa12.33□□□□□ -0.44
UBE2D3-219ENST00000505207 TADA2AO75478 443 aa12.33□□□□□ -0.44
UBE2D3-219ENST00000505207 GBP2P32456 591 aaPredicted RBP12.33□□□□□ -0.44
UBE2D3-219ENST00000505207 ARL2P36404 184 aa12.33□□□□□ -0.44
UBE2D3-219ENST00000505207 SCNN1GP51170 649 aa12.33□□□□□ -0.44
UBE2D3-219ENST00000505207 DSG1Q02413 1049 aa12.33□□□□□ -0.44
UBE2D3-219ENST00000505207 DSC1Q08554 894 aa12.33□□□□□ -0.44
UBE2D3-219ENST00000505207 SPIRE1Q08AE8 756 aa12.33□□□□□ -0.44
UBE2D3-219ENST00000505207 SAFBQ15424 915 aaKnown RBP eCLIP12.33□□□□□ -0.44
UBE2D3-219ENST00000505207 KIAA0319Q5VV43 1072 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms