RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 ADH1AP07327 375 aa6.81□□□□□ -1.32
GYPB-204ENST00000504951 HOXA9P31269 272 aa6.81□□□□□ -1.32
GYPB-204ENST00000504951 GBP2P32456 591 aaPredicted RBP6.81□□□□□ -1.32
GYPB-204ENST00000504951 KIF5BP33176 963 aa6.81□□□□□ -1.32
GYPB-204ENST00000504951 CNR2P34972 360 aa6.81□□□□□ -1.32
GYPB-204ENST00000504951 MLLT3P42568 568 aaPredicted RBP6.81□□□□□ -1.32
GYPB-204ENST00000504951 PHKA2P46019 1235 aa6.81□□□□□ -1.32
GYPB-204ENST00000504951 METAP2P50579 478 aaKnown RBP eCLIP6.81□□□□□ -1.32
GYPB-204ENST00000504951 RAB27AP51159 221 aa6.81□□□□□ -1.32
GYPB-204ENST00000504951 NLRP11P59045 1033 aaKnown RBP6.81□□□□□ -1.32
GYPB-204ENST00000504951 CSTF1Q05048 431 aaKnown RBP6.81□□□□□ -1.32
GYPB-204ENST00000504951 ITGB3BPQ13352 177 aaPredicted RBP6.81□□□□□ -1.32
GYPB-204ENST00000504951 FZD5Q13467 585 aa6.81□□□□□ -1.32
GYPB-204ENST00000504951 COL9A3Q14050 684 aaPredicted RBP6.81□□□□□ -1.32
GYPB-204ENST00000504951 MLF2Q15773 248 aaPredicted RBP6.81□□□□□ -1.32
GYPB-204ENST00000504951 CSRP2Q16527 193 aa6.81□□□□□ -1.32
GYPB-204ENST00000504951 SLC44A4Q53GD3 710 aa6.81□□□□□ -1.32
GYPB-204ENST00000504951 NOMO2Q5JPE7 1267 aa6.81□□□□□ -1.32
GYPB-204ENST00000504951 ZBTB41Q5SVQ8 909 aa6.81□□□□□ -1.32
GYPB-204ENST00000504951 ZNF746Q6NUN9 644 aaPredicted RBP6.81□□□□□ -1.32
GYPB-204ENST00000504951 GLB1LQ6UWU2 654 aa6.81□□□□□ -1.32
GYPB-204ENST00000504951 MTSS1LQ765P7 747 aa6.81□□□□□ -1.32
GYPB-204ENST00000504951 CATIPQ7Z7H3 387 aa6.81□□□□□ -1.32
GYPB-204ENST00000504951 MRPL10Q7Z7H8 261 aaKnown RBP6.81□□□□□ -1.32
GYPB-204ENST00000504951 SMAP1Q8IYB5 467 aaPredicted RBP6.81□□□□□ -1.32
GYPB-204ENST00000504951 TMTC2Q8N394 836 aa6.81□□□□□ -1.32
GYPB-204ENST00000504951 EXOC6Q8TAG9 804 aa6.81□□□□□ -1.32
GYPB-204ENST00000504951 HELQQ8TDG4 1101 aa6.81□□□□□ -1.32
GYPB-204ENST00000504951 IGDCC4Q8TDY8 1250 aa6.81□□□□□ -1.32
GYPB-204ENST00000504951 FAM167AQ96KS9 214 aa6.81□□□□□ -1.32
GYPB-204ENST00000504951 MBOAT7Q96N66 472 aa6.81□□□□□ -1.32
GYPB-204ENST00000504951 GLT8D2Q9H1C3 349 aa6.81□□□□□ -1.32
GYPB-204ENST00000504951 LY9Q9HBG7 655 aa6.81□□□□□ -1.32
GYPB-204ENST00000504951 ZNF302Q9NR11 478 aa6.81□□□□□ -1.32
GYPB-204ENST00000504951 MAN1C1Q9NR34 630 aa6.81□□□□□ -1.32
GYPB-204ENST00000504951 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.81□□□□□ -1.323e-6■■□□□ 13.8
GYPB-204ENST00000504951 CHST7Q9NS84 486 aa6.81□□□□□ -1.32
GYPB-204ENST00000504951 DIAPH3Q9NSV4 1193 aa6.81□□□□□ -1.32
GYPB-204ENST00000504951 GINS2Q9Y248 185 aa6.81□□□□□ -1.32
GYPB-204ENST00000504951 ASPMQ8IZT6 3477 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 ERICH2A1L162 156 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 TMEM8BA6NDV4 472 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 FAM170BA6NMN3 283 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 SOBPA7XYQ1 873 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 DDAH1O94760 285 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 PAPSS2O95340 614 aaPredicted RBP6.8□□□□□ -1.32
GYPB-204ENST00000504951 CCNE2O96020 404 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 GLUD1P00367 558 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 CYP3A4P08684 503 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 GSPT1P15170 499 aaKnown RBP6.8□□□□□ -1.32
GYPB-204ENST00000504951 HOXA6P31267 233 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 GPC3P51654 580 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 MLLT6P55198 1093 aaPredicted RBP6.8□□□□□ -1.32
GYPB-204ENST00000504951 GPC5P78333 572 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 DSG1Q02413 1049 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 PTH1RQ03431 593 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 TRDNQ13061 729 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 PPP2R5DQ14738 602 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 SART3Q15020 963 aaKnown RBP6.8□□□□□ -1.32
GYPB-204ENST00000504951 SPECC1Q5M775 1068 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 MIS18BP1Q6P0N0 1132 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 PDXDC2PQ6P474 469 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 CCDC60Q8IWA6 550 aaPredicted RBP6.8□□□□□ -1.32
GYPB-204ENST00000504951 FEZF2Q8TBJ5 459 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 BCL7CQ8WUZ0 217 aaPredicted RBP6.8□□□□□ -1.32
GYPB-204ENST00000504951 CRYGNQ8WXF5 182 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 AUTS2Q8WXX7 1259 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 SMG7Q92540 1137 aaKnown RBP6.8□□□□□ -1.32
GYPB-204ENST00000504951 COL26A1Q96A83 441 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 PGBD4Q96DM1 585 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 MAP7D2Q96T17 732 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 FOXQ1Q9C009 403 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 INO80BQ9C086 356 aaPredicted RBP6.8□□□□□ -1.32
GYPB-204ENST00000504951 RWDD1Q9H446 243 aaPredicted RBP6.8□□□□□ -1.32
GYPB-204ENST00000504951 LTB4R2Q9NPC1 389 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 TRPV5Q9NQA5 729 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 TBC1D22BQ9NU19 505 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 SPATA6Q9NWH7 488 aaPredicted RBP6.8□□□□□ -1.32
GYPB-204ENST00000504951 DAXXQ9UER7 740 aaPredicted RBP6.8□□□□□ -1.32
GYPB-204ENST00000504951 SEC63Q9UGP8 760 aaKnown RBP6.8□□□□□ -1.32
GYPB-204ENST00000504951 CDH7Q9ULB5 785 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 USP18Q9UMW8 372 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 MRPS17Q9Y2R5 130 aaKnown RBP6.8□□□□□ -1.32
GYPB-204ENST00000504951 NUMBLQ9Y6R0 609 aa6.8□□□□□ -1.32
GYPB-204ENST00000504951 ANKRD11Q6UB99 2663 aaPredicted RBP6.8□□□□□ -1.32
GYPB-204ENST00000504951 MTCL1Q9Y4B5 1905 aaKnown RBP6.8□□□□□ -1.32
GYPB-204ENST00000504951 CNTNAP2Q9UHC6 1331 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 PATJQ8NI35 1801 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 IGKV6-21A0A0C4DH24 114 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 IFIT3O14879 490 aaKnown RBP6.79□□□□□ -1.32
GYPB-204ENST00000504951 TEX28O15482 410 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 ZC3H11AO75152 810 aaKnown RBP eCLIP6.79□□□□□ -1.32
GYPB-204ENST00000504951 VTNP04004 478 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 OATP04181 439 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 CYP21A2P08686 494 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 HNRNPA1P09651 372 aaKnown RBP eCLIP6.79□□□□□ -1.32
GYPB-204ENST00000504951 SREBF1P36956 1147 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 SLC11A1P49279 550 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 CREMQ03060 361 aa6.79□□□□□ -1.32
GYPB-204ENST00000504951 ADCY1Q08828 1119 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms