RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 LCTP09848 1927 aa16.7■□□□□ 0.26
SNCAIP-207ENST00000504884 MYH9P35579 1960 aaKnown RBP16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 GSTTP1A0A1W2PQM5 241 aa16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 LRRIQ3A6PVS8 624 aaPredicted RBP16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 KIF4AO95239 1232 aa16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 UBA1P22314 1058 aaKnown RBP16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 MATR3P43243 847 aaKnown RBP eCLIP16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 GPC3P51654 580 aa16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 MAP2K1Q02750 393 aaPredicted RBP16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 CYP24A1Q07973 514 aa16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 CDCA5Q96FF9 252 aa16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 PAGR1Q9BTK6 254 aa16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 KCNH4Q9UQ05 1017 aa16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 DOCK5Q9H7D0 1870 aa16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 ANKRD62A6NC57 917 aa16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 ZNF233A6NK53 670 aa16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 KIAA0391O15091 583 aaKnown RBP16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 FARP2O94887 1054 aaPredicted RBP16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 NAMPTP43490 491 aa16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 STRN3Q13033 797 aa16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 PPIL2Q13356 520 aa16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 CASP8Q14790 479 aa16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 C9orf131Q5VYM1 1079 aa16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 FAM160B1Q5W0V3 765 aa16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 TAS1R3Q7RTX0 852 aa16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 SLC7A3Q8WY07 619 aa16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 RFFLQ8WZ73 363 aa16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 CLMNQ96JQ2 1002 aa16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 CALR3Q96L12 384 aaKnown RBP16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 SELENOOQ9BVL4 669 aa16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 SUCLA2Q9P2R7 463 aaPredicted RBP16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 PACSIN2Q9UNF0 486 aaPredicted RBP16.69■□□□□ 0.26
SNCAIP-207ENST00000504884 ARID2Q68CP9 1835 aa16.68■□□□□ 0.26
SNCAIP-207ENST00000504884 A0A0G2JMZ2 1700 aa16.68■□□□□ 0.26
SNCAIP-207ENST00000504884 TMCO5BA8MYB1 307 aa16.68■□□□□ 0.26
SNCAIP-207ENST00000504884 CNMDO75829 334 aa16.68■□□□□ 0.26
SNCAIP-207ENST00000504884 ARL2P36404 184 aa16.68■□□□□ 0.26
SNCAIP-207ENST00000504884 RFC5P40937 340 aa16.68■□□□□ 0.26
SNCAIP-207ENST00000504884 LIG4P49917 911 aa16.68■□□□□ 0.26
SNCAIP-207ENST00000504884 TTLL12Q14166 644 aaPredicted RBP16.68■□□□□ 0.26
SNCAIP-207ENST00000504884 KCNV1Q6PIU1 500 aa16.68■□□□□ 0.26
SNCAIP-207ENST00000504884 FASTKD5Q7L8L6 764 aaKnown RBP16.68■□□□□ 0.26
SNCAIP-207ENST00000504884 PEX26Q7Z412 305 aa16.68■□□□□ 0.26
SNCAIP-207ENST00000504884 FAM71AQ8IYT1 594 aa16.68■□□□□ 0.26
SNCAIP-207ENST00000504884 FBXL13Q8NEE6 735 aa16.68■□□□□ 0.26
SNCAIP-207ENST00000504884 SLC35G2Q8TBE7 412 aa16.68■□□□□ 0.26
SNCAIP-207ENST00000504884 ZNF526Q8TF50 670 aaPredicted RBP16.68■□□□□ 0.26
SNCAIP-207ENST00000504884 SEPT1Q8WYJ6 367 aa16.68■□□□□ 0.26
SNCAIP-207ENST00000504884 TMEM143Q96AN5 459 aa16.68■□□□□ 0.26
SNCAIP-207ENST00000504884 ACBD3Q9H3P7 528 aa16.68■□□□□ 0.26
SNCAIP-207ENST00000504884 RBM12Q9NTZ6 932 aaKnown RBP16.68■□□□□ 0.26
SNCAIP-207ENST00000504884 SEPT11Q9NVA2 429 aaKnown RBP16.68■□□□□ 0.26
SNCAIP-207ENST00000504884 RAB20Q9NX57 234 aa16.68■□□□□ 0.26
SNCAIP-207ENST00000504884 SMARCAL1Q9NZC9 954 aa16.68■□□□□ 0.26
SNCAIP-207ENST00000504884 EHD2Q9NZN4 543 aa16.68■□□□□ 0.26
SNCAIP-207ENST00000504884 NCANO14594 1321 aa16.68■□□□□ 0.26
SNCAIP-207ENST00000504884 KCNK3O14649 394 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 EXTL3O43909 919 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 OSBPP22059 807 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 DNA2P51530 1060 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 STAT5BP51692 787 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 FAM193AP78312 1265 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 METTL7BQ6UX53 244 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 PPM1KQ8N3J5 372 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 DEPTORQ8TB45 409 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 AFAP1L1Q8TED9 768 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 SEMA4DQ92854 862 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 CEP89Q96ST8 783 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 POP1Q99575 1024 aaKnown RBP16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 FAM213AQ9BRX8 229 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 VIPAS39Q9H9C1 493 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 SUGCTQ9HAC7 445 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 STXBP5LQ9Y2K9 1186 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 PPME1Q9Y570 386 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 STYXL1Q9Y6J8 313 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 UTRNP46939 3433 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 PAPPA2Q9BXP8 1791 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 K7ERI5 159 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 TULP1O00294 542 aaPredicted RBP16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 ZMYND10O75800 440 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 GLRA2P23416 452 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 USP8P40818 1118 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 TARBP2Q15633 366 aaKnown RBP16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 SLFN12LQ6IEE8 588 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 SV2AQ7L0J3 742 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 DAAM2Q86T65 1068 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 ACTRT1Q8TDG2 376 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 L3MBTL3Q96JM7 780 aaPredicted RBP16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 FAM81BQ96LP2 452 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 KREMEN1Q96MU8 473 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 NT5C1BQ96P26 610 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 PCYT2Q99447 389 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 ST7Q9NRC1 585 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 RBPJLQ9UBG7 517 aa16.67■□□□□ 0.26
SNCAIP-207ENST00000504884 PIGRP01833 764 aa16.66■□□□□ 0.26
SNCAIP-207ENST00000504884 ABCB4P21439 1286 aa16.66■□□□□ 0.26
SNCAIP-207ENST00000504884 PRPF4BQ13523 1007 aaKnown RBP16.66■□□□□ 0.26
SNCAIP-207ENST00000504884 TERF2Q15554 542 aa16.66■□□□□ 0.26
SNCAIP-207ENST00000504884 C8orf74Q6P047 294 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms