RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 RBP3P10745 1247 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 XRCC6P12956 609 aaKnown RBP eCLIP4.9□□□□□ -1.63
RFC1-208ENST00000504849 TRAPPC10P48553 1259 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 RGS19P49795 217 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 COL10A1Q03692 680 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 CCDC173Q0VFZ6 552 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 AUHQ13825 339 aaKnown RBP4.9□□□□□ -1.63
RFC1-208ENST00000504849 ARHGAP29Q52LW3 1261 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 SLC35F1Q5T1Q4 408 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 ZKSCAN2Q63HK3 967 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 GTF2IRD2BQ6EKJ0 949 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 GTF2IRD2Q86UP8 949 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 KBTBD2Q8IY47 623 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 CPXCR1Q8N123 301 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 TEX19Q8NA77 164 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 C1orf162Q8NEQ5 155 aaPredicted RBP4.9□□□□□ -1.63
RFC1-208ENST00000504849 EXTL1Q92935 676 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 AHCYL2Q96HN2 611 aaKnown RBP4.9□□□□□ -1.63
RFC1-208ENST00000504849 MAP7D2Q96T17 732 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 MKRN2Q9H000 416 aaKnown RBP4.9□□□□□ -1.63
RFC1-208ENST00000504849 CSRNP2Q9H175 543 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 NKX2-4Q9H2Z4 354 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 GRPEL1Q9HAV7 217 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 PCDH18Q9HCL0 1135 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 GP6Q9HCN6 339 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 CABP5Q9NP86 173 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 EMC7Q9NPA0 242 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 JADE2Q9NQC1 790 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 C1orf112Q9NSG2 853 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 CGGBP1Q9UFW8 167 aaPredicted RBP4.9□□□□□ -1.63
RFC1-208ENST00000504849 NUDT5Q9UKK9 219 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 FBXL21Q9UKT6 434 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 DIS3Q9Y2L1 958 aaKnown RBP4.9□□□□□ -1.63
RFC1-208ENST00000504849 PPP2R3BQ9Y5P8 575 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 DMRT1Q9Y5R6 373 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 MRFAP1Q9Y605 127 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 SCINQ9Y6U3 715 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 FRMPD2Q68DX3 1309 aaPredicted RBP4.9□□□□□ -1.63
RFC1-208ENST00000504849 KIF16BQ96L93 1317 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 NEURL4Q96JN8 1562 aa4.9□□□□□ -1.63
RFC1-208ENST00000504849 MYOM2P54296 1465 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 ZNF891A8MT65 544 aaPredicted RBP4.89□□□□□ -1.63
RFC1-208ENST00000504849 GLRX3O76003 335 aaKnown RBP4.89□□□□□ -1.63
RFC1-208ENST00000504849 HSP90AB1P08238 724 aaKnown RBP4.89□□□□□ -1.63
RFC1-208ENST00000504849 HSPA6P17066 643 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 KCNA6P17658 529 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 IARSP41252 1262 aaKnown RBP4.89□□□□□ -1.63
RFC1-208ENST00000504849 RARSP54136 660 aaKnown RBP4.89□□□□□ -1.63
RFC1-208ENST00000504849 GUCY1A3Q02108 690 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 LMOD3Q0VAK6 560 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 ADAM9Q13443 819 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 MVPQ14764 893 aaKnown RBP4.89□□□□□ -1.63
RFC1-208ENST00000504849 GRM3Q14832 879 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 CCDC142Q17RM4 750 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 ALFQ53S48 1182 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 ANO1Q5XXA6 986 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 CCDC70Q6NSX1 233 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 RSPO2Q6UXX9 243 aaPredicted RBP4.89□□□□□ -1.63
RFC1-208ENST00000504849 HDGFL2Q7Z4V5 671 aaPredicted RBP4.89□□□□□ -1.63
RFC1-208ENST00000504849 PNMA8AQ86V59 439 aaPredicted RBP4.89□□□□□ -1.63
RFC1-208ENST00000504849 CMTR2Q8IYT2 770 aaKnown RBP4.89□□□□□ -1.63
RFC1-208ENST00000504849 IFNL2Q8IZJ0 200 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 TMTC2Q8N394 836 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 LARP4BQ92615 738 aaKnown RBP4.89□□□□□ -1.63
RFC1-208ENST00000504849 SNX21Q969T3 373 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 HSPBAP1Q96EW2 488 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 C1orf159Q96HA4 380 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 FAXDC2Q96IV6 333 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 TNIP3Q96KP6 325 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 MTA3Q9BTC8 594 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 LGR4Q9BXB1 951 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 NMRK2Q9NPI5 230 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 NLRC4Q9NPP4 1024 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 PLCB1Q9NQ66 1216 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 CYP26B1Q9NR63 512 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 KLHL11Q9NVR0 708 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 ZBTB21Q9ULJ3 1066 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 DDX19BQ9UMR2 479 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 SIT1Q9Y3P8 196 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 FHOD1Q9Y613 1164 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 NSD2O96028 1365 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 MYO5CQ9NQX4 1742 aa4.89□□□□□ -1.63
RFC1-208ENST00000504849 BLACEA4D250 179 aa4.88□□□□□ -1.63
RFC1-208ENST00000504849 TRIM75PA6NK02 468 aa4.88□□□□□ -1.63
RFC1-208ENST00000504849 KCNH1O95259 989 aa4.88□□□□□ -1.63
RFC1-208ENST00000504849 MT-CO1P00395 513 aa4.88□□□□□ -1.63
RFC1-208ENST00000504849 SNRPB2P08579 225 aaKnown RBP4.88□□□□□ -1.63
RFC1-208ENST00000504849 TYRP1P17643 537 aa4.88□□□□□ -1.63
RFC1-208ENST00000504849 MSNP26038 577 aaKnown RBP4.88□□□□□ -1.63
RFC1-208ENST00000504849 KCNJ6P48051 423 aa4.88□□□□□ -1.63
RFC1-208ENST00000504849 TERF1P54274 439 aa4.88□□□□□ -1.63
RFC1-208ENST00000504849 FNDC7Q5VTL7 733 aa4.88□□□□□ -1.63
RFC1-208ENST00000504849 EFCAB2Q5VUJ9 269 aa4.88□□□□□ -1.63
RFC1-208ENST00000504849 KRBA2Q6ZNG9 492 aa4.88□□□□□ -1.63
RFC1-208ENST00000504849 CHST15Q7LFX5 561 aaPredicted RBP4.88□□□□□ -1.63
RFC1-208ENST00000504849 MTERF4Q7Z6M4 381 aaKnown RBP4.88□□□□□ -1.63
RFC1-208ENST00000504849 CABP7Q86V35 215 aa4.88□□□□□ -1.63
RFC1-208ENST00000504849 MIB1Q86YT6 1006 aa4.88□□□□□ -1.63
RFC1-208ENST00000504849 ANKRD42Q8N9B4 389 aa4.88□□□□□ -1.63
RFC1-208ENST00000504849 TMEM145Q8NBT3 493 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms